RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 FAM166AQ6J272 317 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 OR4C3Q8NH37 302 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 OCC1Q8TAD7 63 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 ABHD14AQ9BUJ0 271 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 NDUFC2O95298 119 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 IGLC1P0CG04 106 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 C16orf54Q6UWD8 224 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 OR5AN1Q8NGI8 311 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 IL11P20809 199 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 C2orf27AQ580R0 203 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 FLYWCH2Q96CP2 140 aaKnown RBP5.32□□□□□ -1.56
CLK3-212ENST00000563418 HIGD1AQ9Y241 93 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 TNRC6AQ8NDV7 1962 aaKnown RBP5.31□□□□□ -1.56
CLK3-212ENST00000563418 LIPT2A6NK58 231 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 HERV-K104P63124 156 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 METTL12A8MUP2 240 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 FAM157AC9JC47 383 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 B4GALT1P15291 398 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 ETDBQ3ZM63 59 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 PRSS41Q7RTY9 318 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 FOXF1Q12946 379 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 TNXAQ16473 311 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 ASPHD2Q6ICH7 369 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 GAGE2AQ6NT46 116 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.31□□□□□ -1.56
CLK3-212ENST00000563418 C18orf32Q8TCD1 76 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 hDV102S1A0JD36 115 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 SH2D7A6NKC9 451 aaPredicted RBP5.31□□□□□ -1.56
CLK3-212ENST00000563418 F2RL2O00254 374 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 DUSP2Q05923 314 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 C5orf64Q2M2E5 130 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 K7ESM1 405 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 ATP5G1P05496 136 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 IL9P15248 144 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 IGLL1P15814 213 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 ORM2P19652 201 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 GFRA1P56159 465 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 RAC3P60763 192 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 RPS16P62249 146 aaKnown RBP5.31□□□□□ -1.56
CLK3-212ENST00000563418 CACNG7P62955 275 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 ATP5G2Q06055 141 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 SPINK9Q5DT21 86 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 WFDC6Q9BQY6 131 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 PRNTQ86SH4 94 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 KIR3DL3Q8N743 410 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 SCNM1Q9BWG6 230 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 WFDC5Q8TCV5 224 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 FOXC2Q99958 501 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 R3HDMLQ9H3Y0 253 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 ONECUT1Q9UBC0 465 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 PLXNA1Q9UIW2 1896 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 SHANK3Q9BYB0 1731 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 SHISA7A6NL88 538 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 CELA3AP09093 270 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 GZMHP20718 246 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 GNB1P62873 340 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 ZNF146Q15072 292 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 LCN12Q6JVE5 192 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 IFI27L1Q96BM0 104 aa5.31□□□□□ -1.56
CLK3-212ENST00000563418 NABP2Q9BQ15 211 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 FOXQ1Q9C009 403 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 SPANXB1Q9NS25 103 aaPredicted RBP5.3□□□□□ -1.56
CLK3-212ENST00000563418 PTPRDP23468 1912 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 HEATR5BQ9P2D3 2071 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 DLL1O00548 723 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 RPL8P62917 257 aaKnown RBP5.3□□□□□ -1.56
CLK3-212ENST00000563418 FOXB1Q99853 325 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 OVOL2Q9BRP0 275 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 H3BMG7 143 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 HGFACQ04756 655 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 RNASE7Q9H1E1 156 aaKnown RBP5.3□□□□□ -1.56
CLK3-212ENST00000563418 MBNL3Q9NUK0 354 aaKnown RBP5.3□□□□□ -1.56
CLK3-212ENST00000563418 HCFC2Q9Y5Z7 792 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 TEX48A0A1B0GUV7 120 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 TMEM229AB2RXF0 380 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 GRPP07492 148 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 EVI2AP22794 236 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 RPL15P61313 204 aaKnown RBP5.3□□□□□ -1.56
CLK3-212ENST00000563418 CCL7P80098 99 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 ALPK3Q96L96 1907 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 PPP1CAP62136 330 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 OR1L8Q8NGR8 309 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 RASL11BQ9BPW5 248 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 EDA2RQ9HAV5 297 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 FOLR3P41439 243 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 C2orf83Q53S99 150 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 RAB1BQ9H0U4 201 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 IL23AQ9NPF7 189 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 TRPM7Q96QT4 1865 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 MPDZO75970 2070 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 C22orf46C9J442 243 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 CD55P08174 381 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 CEACAM21Q3KPI0 293 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 FRMPD3Q5JV73 1810 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 A0A1W2PQF6 199 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 C8orf86Q6ZUL3 223 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 FBXL15Q9H469 300 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 R4GN57 208 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 COL18A1P39060 1754 aa5.3□□□□□ -1.56
CLK3-212ENST00000563418 TMEM30BQ3MIR4 351 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms