RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SNRPGP15A8MWD9 76 aa14.76□□□□□ -0.05
RAB40C-207ENST00000563109 TEX22C9J3V5 150 aa14.76□□□□□ -0.05
RAB40C-207ENST00000563109 ST8SIA3O43173 380 aa14.76□□□□□ -0.05
RAB40C-207ENST00000563109 IFNA17P01571 189 aa14.76□□□□□ -0.05
RAB40C-207ENST00000563109 IGHG4P01861 327 aa14.76□□□□□ -0.05
RAB40C-207ENST00000563109 HSPE1P61604 102 aaKnown RBP14.76□□□□□ -0.05
RAB40C-207ENST00000563109 C19orf54Q5BKX5 351 aa14.76□□□□□ -0.05
RAB40C-207ENST00000563109 GGNBP1Q5YKI7 109 aa14.76□□□□□ -0.05
RAB40C-207ENST00000563109 HSD17B13Q7Z5P4 300 aaPredicted RBP14.76□□□□□ -0.05
RAB40C-207ENST00000563109 MINDY2Q8NBR6 621 aa14.76□□□□□ -0.05
RAB40C-207ENST00000563109 NDUFA4L2Q9NRX3 87 aa14.76□□□□□ -0.05
RAB40C-207ENST00000563109 COA4Q9NYJ1 87 aa14.76□□□□□ -0.05
RAB40C-207ENST00000563109 TET2Q6N021 2002 aaPredicted RBP14.75□□□□□ -0.05
RAB40C-207ENST00000563109 SLC25A6P12236 298 aa14.75□□□□□ -0.05
RAB40C-207ENST00000563109 PPIFP30405 207 aaKnown RBP14.75□□□□□ -0.05
RAB40C-207ENST00000563109 PRCDQ00LT1 54 aa14.75□□□□□ -0.05
RAB40C-207ENST00000563109 FOXE3Q13461 319 aa14.75□□□□□ -0.05
RAB40C-207ENST00000563109 CXorf66Q5JRM2 361 aaPredicted RBP14.75□□□□□ -0.05
RAB40C-207ENST00000563109 ASPHD1Q5U4P2 390 aa14.75□□□□□ -0.05
RAB40C-207ENST00000563109 TMEM65Q6PI78 240 aa14.75□□□□□ -0.05
RAB40C-207ENST00000563109 C10orf99Q6UWK7 81 aa14.75□□□□□ -0.05
RAB40C-207ENST00000563109 Q6ZRM9 215 aa14.75□□□□□ -0.05
RAB40C-207ENST00000563109 OR5T1Q8NG75 326 aa14.75□□□□□ -0.05
RAB40C-207ENST00000563109 OR1S1Q8NH92 325 aa14.75□□□□□ -0.05
RAB40C-207ENST00000563109 FAM110DQ8TAY7 271 aaPredicted RBP14.75□□□□□ -0.05
RAB40C-207ENST00000563109 WIPF2Q8TF74 440 aaPredicted RBP14.75□□□□□ -0.05
RAB40C-207ENST00000563109 ZNF747Q9BV97 191 aa14.75□□□□□ -0.05
RAB40C-207ENST00000563109 PLEKHA3Q9HB20 300 aa14.75□□□□□ -0.05
RAB40C-207ENST00000563109 ENY2Q9NPA8 101 aa14.75□□□□□ -0.05
RAB40C-207ENST00000563109 ZNF355PQ9NSJ1 428 aa14.75□□□□□ -0.05
RAB40C-207ENST00000563109 FBN1P35555 2871 aaKnown RBP14.75□□□□□ -0.05
RAB40C-207ENST00000563109 E7EUB6 86 aa14.74□□□□□ -0.05
RAB40C-207ENST00000563109 ADAP1O75689 374 aa14.74□□□□□ -0.05
RAB40C-207ENST00000563109 ELANEP08246 267 aa14.74□□□□□ -0.05
RAB40C-207ENST00000563109 PF4V1P10720 104 aa14.74□□□□□ -0.05
RAB40C-207ENST00000563109 HOXA1P49639 335 aaPredicted RBP14.74□□□□□ -0.05
RAB40C-207ENST00000563109 KHDC1LQ5JSQ8 128 aa14.74□□□□□ -0.05
RAB40C-207ENST00000563109 C11orf44Q8N8P7 122 aa14.74□□□□□ -0.05
RAB40C-207ENST00000563109 OR52E5Q8NH55 327 aa14.74□□□□□ -0.05
RAB40C-207ENST00000563109 A0A1B0GW64 132 aa14.73□□□□□ -0.05
RAB40C-207ENST00000563109 IGLC7A0M8Q6 106 aa14.73□□□□□ -0.05
RAB40C-207ENST00000563109 CGB1A6NKQ9 187 aa14.73□□□□□ -0.05
RAB40C-207ENST00000563109 NPIPB5A8MRT5 1133 aa14.73□□□□□ -0.05
RAB40C-207ENST00000563109 H3BUA1 57 aa14.73□□□□□ -0.05
RAB40C-207ENST00000563109 IGLV1-40P01703 118 aa14.73□□□□□ -0.05
RAB40C-207ENST00000563109 CD28P10747 220 aa14.73□□□□□ -0.05
RAB40C-207ENST00000563109 AREGP15514 252 aa14.73□□□□□ -0.05
RAB40C-207ENST00000563109 PSMB6P28072 239 aa14.73□□□□□ -0.05
RAB40C-207ENST00000563109 SPCS3P61009 180 aa14.73□□□□□ -0.05
RAB40C-207ENST00000563109 TATDN3Q17R31 274 aa14.73□□□□□ -0.05
RAB40C-207ENST00000563109 AARDQ4LEZ3 155 aa14.73□□□□□ -0.05
RAB40C-207ENST00000563109 SHISA2Q6UWI4 295 aa14.73□□□□□ -0.05
RAB40C-207ENST00000563109 TTC9CQ8N5M4 171 aa14.73□□□□□ -0.05
RAB40C-207ENST00000563109 TCRBV4S1A1TA0A5B7 111 aa14.72□□□□□ -0.05
RAB40C-207ENST00000563109 CYB5BO43169 146 aa14.72□□□□□ -0.05
RAB40C-207ENST00000563109 REG1AP05451 166 aa14.72□□□□□ -0.05
RAB40C-207ENST00000563109 OR13C7P0DN81 318 aa14.72□□□□□ -0.05
RAB40C-207ENST00000563109 PSMB8P28062 276 aa14.72□□□□□ -0.05
RAB40C-207ENST00000563109 KRTAP10-3P60369 221 aa14.72□□□□□ -0.05
RAB40C-207ENST00000563109 OXA1LQ15070 435 aa14.72□□□□□ -0.05
RAB40C-207ENST00000563109 SPINK9Q5DT21 86 aa14.72□□□□□ -0.05
RAB40C-207ENST00000563109 OR10W1Q8NGF6 305 aa14.72□□□□□ -0.05
RAB40C-207ENST00000563109 CITED1Q99966 193 aa14.72□□□□□ -0.05
RAB40C-207ENST00000563109 SLA2Q9H6Q3 261 aa14.72□□□□□ -0.05
RAB40C-207ENST00000563109 CEBPZOSA8MTT3 80 aa14.71□□□□□ -0.05
RAB40C-207ENST00000563109 SSNA1O43805 119 aa14.71□□□□□ -0.05
RAB40C-207ENST00000563109 SOX15O60248 233 aa14.71□□□□□ -0.05
RAB40C-207ENST00000563109 NXPH3O95157 252 aa14.71□□□□□ -0.05
RAB40C-207ENST00000563109 DEFA4P12838 97 aa14.71□□□□□ -0.05
RAB40C-207ENST00000563109 TPPP2P59282 170 aa14.71□□□□□ -0.05
RAB40C-207ENST00000563109 ERHP84090 104 aaKnown RBP14.71□□□□□ -0.05
RAB40C-207ENST00000563109 C7orf66A4D0T2 115 aa14.7□□□□□ -0.06
RAB40C-207ENST00000563109 C5orf51A6NDU8 294 aa14.7□□□□□ -0.06
RAB40C-207ENST00000563109 FAM25EA8MYX2 175 aa14.7□□□□□ -0.06
RAB40C-207ENST00000563109 FAM90A26D6RGX4 464 aa14.7□□□□□ -0.06
RAB40C-207ENST00000563109 CCSO14618 274 aa14.7□□□□□ -0.06
RAB40C-207ENST00000563109 TRGV3P03979 118 aa14.7□□□□□ -0.06
RAB40C-207ENST00000563109 CRYGCP07315 174 aa14.7□□□□□ -0.06
RAB40C-207ENST00000563109 CTRB1P17538 263 aa14.7□□□□□ -0.06
RAB40C-207ENST00000563109 WT1-ASQ06250 92 aa14.7□□□□□ -0.06
RAB40C-207ENST00000563109 TNFRSF9Q07011 255 aa14.7□□□□□ -0.06
RAB40C-207ENST00000563109 SRSF4Q08170 494 aaKnown RBP14.7□□□□□ -0.06
RAB40C-207ENST00000563109 IAH1Q2TAA2 248 aaPredicted RBP14.7□□□□□ -0.06
RAB40C-207ENST00000563109 PDLIM3Q53GG5 364 aaPredicted RBP14.7□□□□□ -0.06
RAB40C-207ENST00000563109 CTRB2Q6GPI1 263 aa14.7□□□□□ -0.06
RAB40C-207ENST00000563109 RNF152Q8N8N0 203 aa14.7□□□□□ -0.06
RAB40C-207ENST00000563109 MS4A10Q96PG2 267 aa14.7□□□□□ -0.06
RAB40C-207ENST00000563109 CITED2Q99967 270 aaPredicted RBP14.7□□□□□ -0.06
RAB40C-207ENST00000563109 HSPB7Q9UBY9 170 aa14.7□□□□□ -0.06
RAB40C-207ENST00000563109 TSSC4Q9Y5U2 329 aaPredicted RBP14.7□□□□□ -0.06
RAB40C-207ENST00000563109 C13orf42A0A1B0GVH6 325 aa14.69□□□□□ -0.06
RAB40C-207ENST00000563109 PITX3O75364 302 aa14.69□□□□□ -0.06
RAB40C-207ENST00000563109 MED6O75586 246 aa14.69□□□□□ -0.06
RAB40C-207ENST00000563109 BRI3O95415 125 aa14.69□□□□□ -0.06
RAB40C-207ENST00000563109 RPLP1P05386 114 aaKnown RBP14.69□□□□□ -0.06
RAB40C-207ENST00000563109 HIST1H1BP16401 226 aaKnown RBP14.69□□□□□ -0.06
RAB40C-207ENST00000563109 RAB9AP51151 201 aa14.69□□□□□ -0.06
RAB40C-207ENST00000563109 CD83Q01151 205 aa14.69□□□□□ -0.06
RAB40C-207ENST00000563109 TCTEX1D4Q5JR98 221 aa14.69□□□□□ -0.06
RAB40C-207ENST00000563109 GSG1LQ6UXU4 331 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms