RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 RPL30P62888 115 aaKnown RBP3.53□□□□□ -1.84
SMG1-206ENST00000562668 BLCAPP62952 87 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 CDK10Q15131 360 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 MSMO1Q15800 293 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 LY6EQ16553 131 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 VAX1Q5SQQ9 334 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 AADACL3Q5VUY0 350 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 PYHIN1Q6K0P9 492 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 C16orf87Q6PH81 154 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 TGIF2LXQ8IUE1 241 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 OR8H3Q8N146 312 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 Q8N2B8 174 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 TMEM229BQ8NBD8 167 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.53□□□□□ -1.84
SMG1-206ENST00000562668 OR4D10Q8NGI6 311 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 OR10X1Q8NGY0 326 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 OR8U1Q8NH10 309 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 OR56B4Q8NH76 319 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 OR10J5Q8NHC4 309 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 SMIM4Q8WVI0 70 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 GIMAP1Q8WWP7 306 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 TOMM40LQ969M1 308 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 RPEQ96AT9 228 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 DIRAS2Q96HU8 199 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 RBM14Q96PK6 669 aaKnown RBP3.53□□□□□ -1.84
SMG1-206ENST00000562668 C19orf24Q9BVV8 132 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 SRRQ9GZT4 340 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 FXYD6Q9H0Q3 95 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 DPAGT1Q9H3H5 408 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 GHITMQ9H3K2 345 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 C16orf95Q9H693 158 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 ZNF702PQ9H963 129 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 RAB9BQ9NP90 201 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 PIPOXQ9P0Z9 390 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 ZNF107Q9UII5 783 aaPredicted RBP3.53□□□□□ -1.84
SMG1-206ENST00000562668 RNF150Q9ULK6 438 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 MRPS7Q9Y2R9 242 aaKnown RBP3.53□□□□□ -1.84
SMG1-206ENST00000562668 AMMECR1Q9Y4X0 333 aaPredicted RBP3.53□□□□□ -1.84
SMG1-206ENST00000562668 IGLV9-49A0A0B4J1Y8 123 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 IGHV3-72A0A0B4J1Y9 119 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 ANKRD20A5PA0PJZ0 165 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 FABP12A6NFH5 140 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 OR5H14A6NHG9 310 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 RGS5O15539 181 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 TXNL1O43396 289 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 OR2F2O95006 317 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 NDUFA3O95167 84 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 PPYP01298 95 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 IGKV1D-33P01593 117 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 IGKV1-33P01594 117 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 IGLV2-23P01705 113 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 PMP2P02689 132 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 CD3DP04234 171 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 IGKV1-16P04430 117 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 CRYGBP07316 175 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 IL3RAP26951 378 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 CNTFRP26992 372 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 HLA-DMAP28067 261 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 GNRHRP30968 328 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 FCGR2CP31995 323 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 RCVRNP35243 200 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 HRH1P35367 487 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 MRPS10P82664 201 aaKnown RBP3.52□□□□□ -1.85
SMG1-206ENST00000562668 MRPS15P82914 257 aaKnown RBP3.52□□□□□ -1.85
SMG1-206ENST00000562668 SSBP1Q04837 148 aaKnown RBP3.52□□□□□ -1.85
SMG1-206ENST00000562668 IL18Q14116 193 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 TCTEX1D4Q5JR98 221 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 C11orf88Q6PI97 169 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 FAM131AQ6UXB0 335 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 ZNF818PQ6ZRF7 136 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 LINC00299Q6ZSB3 139 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 FAM71E2Q8N5Q1 922 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 ZNF645Q8N7E2 425 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 C5orf56Q8N8D9 126 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 Q8N9W7 124 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 DRAXINQ8NBI3 349 aaPredicted RBP3.52□□□□□ -1.85
SMG1-206ENST00000562668 NPBQ8NG41 125 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 OR13C8Q8NGS7 320 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 LINC01006Q8NI28 216 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 MOB3AQ96BX8 217 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 OR2D2Q9H210 308 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 BATF3Q9NR55 127 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 CCL28Q9NRJ3 127 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 TNFRSF19Q9NS68 423 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 NECAP2Q9NVZ3 263 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 RABL2AQ9UBK7 228 aaPredicted RBP3.52□□□□□ -1.85
SMG1-206ENST00000562668 RABL2BQ9UNT1 228 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 TRRAPQ9Y4A5 3859 aa3.52□□□□□ -1.85
SMG1-206ENST00000562668 DNAH3Q8TD57 4116 aa3.51□□□□□ -1.85
SMG1-206ENST00000562668 COL6A5A8TX70 2615 aa3.51□□□□□ -1.85
SMG1-206ENST00000562668 SRRM4A7MD48 611 aaKnown RBP3.51□□□□□ -1.85
SMG1-206ENST00000562668 J3QRK9 145 aa3.51□□□□□ -1.85
SMG1-206ENST00000562668 M0R1X1 148 aa3.51□□□□□ -1.85
SMG1-206ENST00000562668 FGF16O43320 207 aa3.51□□□□□ -1.85
SMG1-206ENST00000562668 RBBP9O75884 186 aa3.51□□□□□ -1.85
SMG1-206ENST00000562668 MOSP00540 346 aa3.51□□□□□ -1.85
SMG1-206ENST00000562668 TBPP20226 339 aa3.51□□□□□ -1.85
SMG1-206ENST00000562668 MDKP21741 143 aaPredicted RBP3.51□□□□□ -1.85
SMG1-206ENST00000562668 GATA2P23769 480 aaPredicted RBP3.51□□□□□ -1.85
SMG1-206ENST00000562668 BRS3P32247 399 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms