RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 IZUMO4Q1ZYL8 232 aa8.39□□□□□ -1.07
LPCAT4-202ENST00000562404 ZNF414Q96IQ9 312 aa8.39□□□□□ -1.07
LPCAT4-202ENST00000562404 OR51B2Q9Y5P1 312 aa8.39□□□□□ -1.07
LPCAT4-202ENST00000562404 U3KQK5 164 aa8.39□□□□□ -1.07
LPCAT4-202ENST00000562404 CSMD3Q7Z407 3707 aa8.39□□□□□ -1.07
LPCAT4-202ENST00000562404 IGHV3-35A0A0C4DH35 117 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 C2orf70A6NJV1 201 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 ZNF785A8K8V0 405 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 F8W735 103 aaPredicted RBP8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 RGS5O15539 181 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 GGCTO75223 188 aaKnown RBP8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 CD74P04233 296 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 CLEC3BP05452 202 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 SERPINE2P07093 398 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 PTBP1P26599 531 aaKnown RBP eCLIP8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 PPP5CP53041 499 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 ERVK-16P61578 105 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 TATDN3Q17R31 274 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 CD300EQ496F6 205 aaPredicted RBP8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 RNASE10Q5GAN6 216 aaKnown RBP8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 LPCAT3Q6P1A2 487 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 UNQ9165/PRO28630Q6UXU0 137 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 SLC38A6Q8IZM9 456 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 CADM3Q8N126 398 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 GDPD1Q8N9F7 314 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 TMEM229BQ8NBD8 167 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 OR1L8Q8NGR8 309 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 ZNF502Q8TBZ5 544 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 EEF1AKMT3Q96AZ1 226 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 WWC2-AS2Q96NR7 200 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 TP53RKQ96S44 253 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 SRSF8Q9BRL6 282 aaKnown RBP8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 HINT2Q9BX68 163 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 SLIRPQ9GZT3 109 aaKnown RBP8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 TMEM14BQ9NUH8 114 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 C19orf73Q9NVV2 129 aa8.38□□□□□ -1.07
LPCAT4-202ENST00000562404 STARD9Q9P2P6 4700 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 TMEM213A2RRL7 107 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 C15orf61A6NNL5 157 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 H3BMQ9 156 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 GABARAPH6UMI1 98 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 LGALS9O00182 355 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 TPPPO94811 219 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 DHFRP00374 187 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 IGKV1-5P01602 117 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 P0C879 139 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 FOLR2P14207 255 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 HIST1H1BP16401 226 aaKnown RBP8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 GPR183P32249 361 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 TMBIM6P55061 237 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 PIGPP57054 158 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 RND3P61587 244 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 DEFB114Q30KQ6 69 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 GPHB5Q86YW7 130 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 RAB2BQ8WUD1 216 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 WFDC10AQ9H1F0 79 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 FAM212BQ9NTI7 297 aaPredicted RBP8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 PEMTQ9UBM1 199 aa8.37□□□□□ -1.07
LPCAT4-202ENST00000562404 DYNC2H1Q8NCM8 4307 aaKnown RBP8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 TRBV7-1A0A0A6YYK4 115 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 H0Y980 276 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 K7EIM0 57 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 SNAPC5O75971 98 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 RAB3DO95716 219 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 IFNA6P05013 189 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 CD7P09564 240 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 PGAM2P15259 253 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 CBLN1P23435 193 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 RPL5P46777 297 aaKnown RBP8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 SP6Q3SY56 376 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 TM4SF20Q53R12 229 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 SPINK9Q5DT21 86 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 FAM209BQ5JX69 171 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 SLC25A24Q6NUK1 477 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 STEAP1BQ6NZ63 245 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 Q8N402 240 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 ARRDC1Q8N5I2 433 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 OR13C8Q8NGS7 320 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 MARCH1Q8TCQ1 289 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 SMIM4Q8WVI0 70 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 LSM10Q969L4 123 aaKnown RBP8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 ISOC1Q96CN7 298 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 WDR89Q96FK6 387 aaPredicted RBP8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 CXorf58Q96LI9 332 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 CCDC59Q9P031 241 aaKnown RBP8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 MLXQ9UH92 298 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 F11RQ9Y624 299 aaKnown RBP8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 CEPT1Q9Y6K0 416 aa8.36□□□□□ -1.07
LPCAT4-202ENST00000562404 A0A0G2JRQ6 117 aa8.35□□□□□ -1.07
LPCAT4-202ENST00000562404 A8MWP6 167 aa8.35□□□□□ -1.07
LPCAT4-202ENST00000562404 A8MZ25 164 aa8.35□□□□□ -1.07
LPCAT4-202ENST00000562404 ADMP35318 185 aa8.35□□□□□ -1.07
LPCAT4-202ENST00000562404 TAS2R19P59542 299 aa8.35□□□□□ -1.07
LPCAT4-202ENST00000562404 SCGB2B2Q4G0G5 96 aa8.35□□□□□ -1.07
LPCAT4-202ENST00000562404 THOC7Q6I9Y2 204 aaKnown RBP8.35□□□□□ -1.07
LPCAT4-202ENST00000562404 LCN12Q6JVE5 192 aa8.35□□□□□ -1.07
LPCAT4-202ENST00000562404 H2BFWTQ7Z2G1 175 aa8.35□□□□□ -1.07
LPCAT4-202ENST00000562404 OR4C16Q8NGL9 310 aa8.35□□□□□ -1.07
LPCAT4-202ENST00000562404 TERB2Q8NHR7 220 aa8.35□□□□□ -1.07
LPCAT4-202ENST00000562404 SCARB1Q8WTV0 552 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms