RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 LYPLA2O95372 231 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 ZFYVE9O95405 1425 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 HAND1O96004 215 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 IGHV3-7P01780 117 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 C1QCP02747 245 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 TTRP02766 147 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 IGKV1-16P04430 117 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 SERPINA7P05543 415 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 RPS17P08708 135 aaKnown RBP0.68□□□□□ -2.3
CHD9-204ENST00000561869 CTXN2P0C2S0 81 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 CD79AP11912 226 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 S100A7P31151 101 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 HOXA6P31267 233 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 ANP32AP39687 249 aaKnown RBP0.68□□□□□ -2.3
CHD9-204ENST00000561869 CSN1S1P47710 185 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 HINT1P49773 126 aaPredicted RBP0.68□□□□□ -2.3
CHD9-204ENST00000561869 ERVS71-1P61550 626 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 SNRPD2P62316 118 aaKnown RBP0.68□□□□□ -2.3
CHD9-204ENST00000561869 HIST1H4AP62805 103 aaKnown RBP0.68□□□□□ -2.3
CHD9-204ENST00000561869 ERHP84090 104 aaKnown RBP0.68□□□□□ -2.3
CHD9-204ENST00000561869 RPL18Q07020 188 aaKnown RBP0.68□□□□□ -2.3
CHD9-204ENST00000561869 AESQ08117 197 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 FADDQ13158 208 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 IBA57Q5T440 356 aaKnown RBP0.68□□□□□ -2.3
CHD9-204ENST00000561869 TMEM42Q69YG0 159 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 SPOPLQ6IQ16 392 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 TRAPPC5Q8IUR0 188 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 CPAMD8Q8IZJ3 1885 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 OR51D1Q8NGF3 324 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 MRPL30Q8TCC3 161 aaKnown RBP0.68□□□□□ -2.3
CHD9-204ENST00000561869 TSPAN32Q96QS1 320 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 HSPB9Q9BQS6 159 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 WDR61Q9GZS3 305 aaKnown RBP0.68□□□□□ -2.3
CHD9-204ENST00000561869 CHST6Q9GZX3 395 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 TLNRD1Q9H1K6 362 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 EFCAB1Q9HAE3 211 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 CISHQ9NSE2 258 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 CMTM6Q9NX76 183 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 PAQR5Q9NXK6 330 aaPredicted RBP0.68□□□□□ -2.3
CHD9-204ENST00000561869 IL36BQ9NZH7 164 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 HECW2Q9P2P5 1572 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 TP73-AS1Q9UF72 201 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 TIMM22Q9Y584 194 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 TIMM9Q9Y5J7 89 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 NEO1Q92859 1461 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 RGS12O14924 1447 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 A0A087WUJ7 227 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 A0A0D9SEW6 157 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 TRBV10-2A0A0K0K1G8 114 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 IRGMA1A4Y4 181 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 SMIM9A6NGZ8 99 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 ZNF860A6NHJ4 632 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 H3BT86 120 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 J3QQQ9 107 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 FADS1O60427 444 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 CREBL2O60519 120 aaPredicted RBP0.67□□□□□ -2.3
CHD9-204ENST00000561869 NOS1APO75052 506 aaPredicted RBP0.67□□□□□ -2.3
CHD9-204ENST00000561869 ZNF737O75373 536 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 IGKV1-5P01602 117 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 HLA-DRB1P01911 266 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 TNNC2P02585 160 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 CLPSP04118 112 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 PRM2P04554 102 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 ZNF705DP0CH99 300 aaPredicted RBP0.67□□□□□ -2.3
CHD9-204ENST00000561869 SULT1A3P0DMM9 295 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 SULT1A4P0DMN0 295 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 MSNP26038 577 aaKnown RBP0.67□□□□□ -2.3
CHD9-204ENST00000561869 HLA-DMBP28068 263 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 G6PCP35575 357 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 RPL5P46777 297 aaKnown RBP0.67□□□□□ -2.3
CHD9-204ENST00000561869 HAAOP46952 286 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 ZNF80P51504 273 aaPredicted RBP0.67□□□□□ -2.3
CHD9-204ENST00000561869 TMEM258P61165 79 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 RPL26P61254 145 aaKnown RBP0.67□□□□□ -2.3
CHD9-204ENST00000561869 SRSF6Q13247 344 aaKnown RBP0.67□□□□□ -2.3
CHD9-204ENST00000561869 EDDM3AQ14507 147 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 GRK1Q15835 563 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 IAH1Q2TAA2 248 aaPredicted RBP0.67□□□□□ -2.3
CHD9-204ENST00000561869 LPCAT3Q6P1A2 487 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 KTN1-AS1Q86SY8 53 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 OR13C4Q8NGS5 318 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 PPP1R2P1Q96PQ5 205 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 NIPSNAP1Q9BPW8 284 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 DOHHQ9BU89 302 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 C20orf27Q9GZN8 174 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 OR51V1Q9H2C8 321 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 FAM96AQ9H5X1 160 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 PRTFDC1Q9NRG1 225 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.67□□□□□ -2.3
CHD9-204ENST00000561869 FBXL12Q9NXK8 326 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 RPL26L1Q9UNX3 145 aaKnown RBP0.67□□□□□ -2.3
CHD9-204ENST00000561869 COL4A1P02462 1669 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 FLT4P35916 1363 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 ROBO3Q96MS0 1386 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 RALGAPA2Q2PPJ7 1873 aa0.67□□□□□ -2.3
CHD9-204ENST00000561869 PTPRBP23467 1997 aa0.66□□□□□ -2.3
CHD9-204ENST00000561869 PRRC2BQ5JSZ5 2229 aaKnown RBP0.66□□□□□ -2.3
CHD9-204ENST00000561869 BRWD1Q9NSI6 2320 aa0.66□□□□□ -2.3
CHD9-204ENST00000561869 MAST2Q6P0Q8 1798 aa0.66□□□□□ -2.3
CHD9-204ENST00000561869 STRCQ7RTU9 1775 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms