RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 C10orf113Q5VZT2 155 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 HEPN1Q6WQI6 88 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 STPG3Q8N7X2 389 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 TRBV23-1A0A0A0MS06 115 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 GNG7O60262 68 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 RPL11P62913 178 aaKnown RBP13.49□□□□□ -0.25
AP4E1-205ENST00000561393 ARL16Q0P5N6 197 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 F2RL2O00254 374 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 IGFBP2P18065 325 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 CD24P25063 80 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 LGALS7P47929 136 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 PPOXP50336 477 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 SPNS3Q6ZMD2 512 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 TOLLIPQ9H0E2 274 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 NOTCH3Q9UM47 2321 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 C15orf61A6NNL5 157 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 CCDC144NLQ6NUI1 221 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 RASL11BQ9BPW5 248 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 IFI27L2Q9H2X8 130 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 TIMM9Q9Y5J7 89 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 CSPG4Q6UVK1 2322 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 CLN5O75503 358 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 LCN2P80188 198 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 MSMPQ1L6U9 139 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 RNF212Q495C1 297 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 BAGE3Q86Y29 109 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 BAGE2Q86Y30 109 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 TMEM133Q9H2Q1 129 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 NIT2Q9NQR4 276 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 THYN1Q9P016 225 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 K7EQM0 130 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 C10orf55Q5SWW7 151 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 SLC16A13Q7RTY0 426 aa13.48□□□□□ -0.25
AP4E1-205ENST00000561393 ARFGEF3Q5TH69 2177 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 LOC102723971A0A1B0GUV8 181 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 SRP19P09132 144 aaKnown RBP13.47□□□□□ -0.25
AP4E1-205ENST00000561393 GCSAMLQ5JQS6 135 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 ZNF506Q5JVG8 444 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 ZNF383Q8NA42 475 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 BORCS7Q96B45 105 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 FAM122AQ96E09 287 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 NABP2Q9BQ15 211 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 ZNF705FA8MVS1 300 aaPredicted RBP13.47□□□□□ -0.25
AP4E1-205ENST00000561393 UPK2O00526 184 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 ZNF705DP0CH99 300 aaPredicted RBP13.47□□□□□ -0.25
AP4E1-205ENST00000561393 ZNF705BP0CI00 300 aaPredicted RBP13.47□□□□□ -0.25
AP4E1-205ENST00000561393 COL8A2P25067 703 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 RANP62826 216 aaKnown RBP13.47□□□□□ -0.25
AP4E1-205ENST00000561393 ST6GALNAC3Q8NDV1 305 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 ZNF331Q9NQX6 463 aaPredicted RBP13.47□□□□□ -0.25
AP4E1-205ENST00000561393 CBLN4Q9NTU7 201 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 C1RLQ9NZP8 487 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 VCANP13611 3396 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 TNRC6AQ8NDV7 1962 aaKnown RBP13.47□□□□□ -0.25
AP4E1-205ENST00000561393 PDE6DO43924 150 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 ECSCRQ19T08 205 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 PDPNQ86YL7 162 aa13.47□□□□□ -0.25
AP4E1-205ENST00000561393 SSBP3Q9BWW4 388 aaPredicted RBP13.47□□□□□ -0.25
AP4E1-205ENST00000561393 IL6RP08887 468 aaPredicted RBP13.46□□□□□ -0.25
AP4E1-205ENST00000561393 OR10W1Q8NGF6 305 aa13.46□□□□□ -0.25
AP4E1-205ENST00000561393 OR2T6Q8NHC8 308 aa13.46□□□□□ -0.25
AP4E1-205ENST00000561393 TNFRSF19Q9NS68 423 aa13.46□□□□□ -0.25
AP4E1-205ENST00000561393 TNCP24821 2201 aa13.46□□□□□ -0.25
AP4E1-205ENST00000561393 B4DEV8 164 aa13.46□□□□□ -0.25
AP4E1-205ENST00000561393 GRNP28799 593 aaKnown RBP13.46□□□□□ -0.25
AP4E1-205ENST00000561393 GATA4P43694 442 aa13.46□□□□□ -0.25
AP4E1-205ENST00000561393 KDF1Q8NAX2 398 aaPredicted RBP13.46□□□□□ -0.25
AP4E1-205ENST00000561393 OR5AU1Q8NGC0 362 aa13.46□□□□□ -0.25
AP4E1-205ENST00000561393 IGHV3OR16-10A0A075B7F0 116 aa13.46□□□□□ -0.26
AP4E1-205ENST00000561393 DNASE2O00115 360 aaPredicted RBP13.46□□□□□ -0.26
AP4E1-205ENST00000561393 CSN1S1P47710 185 aa13.46□□□□□ -0.26
AP4E1-205ENST00000561393 TMEM14EPQ6UXP3 125 aa13.46□□□□□ -0.26
AP4E1-205ENST00000561393 Q6ZPA2 131 aa13.46□□□□□ -0.26
AP4E1-205ENST00000561393 CLDND2Q8NHS1 167 aa13.46□□□□□ -0.26
AP4E1-205ENST00000561393 PARLQ9H300 379 aa13.46□□□□□ -0.26
AP4E1-205ENST00000561393 DPM3Q9P2X0 92 aa13.46□□□□□ -0.26
AP4E1-205ENST00000561393 EXPH5Q8NEV8 1989 aa13.45□□□□□ -0.26
AP4E1-205ENST00000561393 IGKV1-16P04430 117 aa13.45□□□□□ -0.26
AP4E1-205ENST00000561393 S100A7P31151 101 aa13.45□□□□□ -0.26
AP4E1-205ENST00000561393 PAX9P55771 341 aa13.45□□□□□ -0.26
AP4E1-205ENST00000561393 DLX1P56177 255 aa13.45□□□□□ -0.26
AP4E1-205ENST00000561393 TCL1AP56279 114 aa13.45□□□□□ -0.26
AP4E1-205ENST00000561393 OR2T10Q8NGZ9 312 aa13.45□□□□□ -0.26
AP4E1-205ENST00000561393 NEU4Q8WWR8 484 aaPredicted RBP13.45□□□□□ -0.26
AP4E1-205ENST00000561393 MMP23AO75900 390 aa13.45□□□□□ -0.26
AP4E1-205ENST00000561393 MOSP00540 346 aa13.45□□□□□ -0.26
AP4E1-205ENST00000561393 CFHR2P36980 270 aa13.45□□□□□ -0.26
AP4E1-205ENST00000561393 C12orf57Q99622 126 aa13.45□□□□□ -0.26
AP4E1-205ENST00000561393 HELTA6NFD8 242 aa13.45□□□□□ -0.26
AP4E1-205ENST00000561393 OR10G8Q8NGN5 311 aa13.45□□□□□ -0.26
AP4E1-205ENST00000561393 ZNF430Q9H8G1 570 aaPredicted RBP13.45□□□□□ -0.26
AP4E1-205ENST00000561393 COL5A1P20908 1838 aaPredicted RBP13.44□□□□□ -0.26
AP4E1-205ENST00000561393 GNLYP22749 145 aa13.44□□□□□ -0.26
AP4E1-205ENST00000561393 ZNF134P52741 427 aa13.44□□□□□ -0.26
AP4E1-205ENST00000561393 ATP5J2P56134 94 aa13.44□□□□□ -0.26
AP4E1-205ENST00000561393 MST1LQ2TV78 715 aa13.44□□□□□ -0.26
AP4E1-205ENST00000561393 HLA-DRB5Q30154 266 aa13.44□□□□□ -0.26
AP4E1-205ENST00000561393 ZNF343Q6P1L6 599 aa13.44□□□□□ -0.26
AP4E1-205ENST00000561393 CLEC2AQ6UVW9 174 aa13.44□□□□□ -0.26
AP4E1-205ENST00000561393 RNF2Q99496 336 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms