RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 POU2AF1Q16633 256 aa20.21■□□□□ 0.83
SNRPA1-215ENST00000561187 OR1L6Q8NGR2 347 aa20.21■□□□□ 0.83
SNRPA1-215ENST00000561187 GIMAP1Q8WWP7 306 aa20.21■□□□□ 0.83
SNRPA1-215ENST00000561187 ZNF2Q9BSG1 426 aaPredicted RBP20.21■□□□□ 0.83
SNRPA1-215ENST00000561187 LOC102724200A0A096LPH7 203 aaPredicted RBP20.2■□□□□ 0.82
SNRPA1-215ENST00000561187 TGOLN2O43493 480 aa20.2■□□□□ 0.82
SNRPA1-215ENST00000561187 GNRHRP30968 328 aa20.2■□□□□ 0.82
SNRPA1-215ENST00000561187 WT1-ASQ06250 92 aa20.2■□□□□ 0.82
SNRPA1-215ENST00000561187 SLC25A24Q6NUK1 477 aa20.2■□□□□ 0.82
SNRPA1-215ENST00000561187 GDPD1Q8N9F7 314 aa20.2■□□□□ 0.82
SNRPA1-215ENST00000561187 PLEKHA2Q9HB19 425 aa20.2■□□□□ 0.82
SNRPA1-215ENST00000561187 MARCH11A6NNE9 402 aa20.19■□□□□ 0.82
SNRPA1-215ENST00000561187 TRAPPC2P0DI81 140 aa20.19■□□□□ 0.82
SNRPA1-215ENST00000561187 TRAPPC2BP0DI82 140 aa20.19■□□□□ 0.82
SNRPA1-215ENST00000561187 OVOL2Q9BRP0 275 aa20.19■□□□□ 0.82
SNRPA1-215ENST00000561187 FXYD6Q9H0Q3 95 aa20.19■□□□□ 0.82
SNRPA1-215ENST00000561187 COMMD9Q9P000 198 aa20.19■□□□□ 0.82
SNRPA1-215ENST00000561187 THYN1Q9P016 225 aa20.19■□□□□ 0.82
SNRPA1-215ENST00000561187 UFC1Q9Y3C8 167 aa20.19■□□□□ 0.82
SNRPA1-215ENST00000561187 TEX50A0A1B0GTY4 177 aa20.18■□□□□ 0.82
SNRPA1-215ENST00000561187 ZNF207O43670 478 aaKnown RBP20.18■□□□□ 0.82
SNRPA1-215ENST00000561187 PTBP1P26599 531 aaKnown RBP eCLIP20.18■□□□□ 0.82
SNRPA1-215ENST00000561187 LSM3P62310 102 aaKnown RBP20.18■□□□□ 0.82
SNRPA1-215ENST00000561187 PMS2P11Q13670 270 aa20.18■□□□□ 0.82
SNRPA1-215ENST00000561187 ANKRD55Q3KP44 614 aa20.18■□□□□ 0.82
SNRPA1-215ENST00000561187 UBAC2Q8NBM4 344 aa20.18■□□□□ 0.82
SNRPA1-215ENST00000561187 CD300LFQ8TDQ1 290 aa20.18■□□□□ 0.82
SNRPA1-215ENST00000561187 TMEM190Q8WZ59 177 aa20.18■□□□□ 0.82
SNRPA1-215ENST00000561187 XRCC3O43542 346 aa20.17■□□□□ 0.82
SNRPA1-215ENST00000561187 G6PCP35575 357 aa20.17■□□□□ 0.82
SNRPA1-215ENST00000561187 LPAR6P43657 344 aa20.17■□□□□ 0.82
SNRPA1-215ENST00000561187 MFAP2P55001 183 aa20.17■□□□□ 0.82
SNRPA1-215ENST00000561187 TAS2R20P59543 309 aa20.17■□□□□ 0.82
SNRPA1-215ENST00000561187 TMEM69Q5SWH9 247 aa20.17■□□□□ 0.82
SNRPA1-215ENST00000561187 SAMD12Q8N8I0 201 aa20.17■□□□□ 0.82
SNRPA1-215ENST00000561187 FCAMRQ8WWV6 532 aa20.17■□□□□ 0.82
SNRPA1-215ENST00000561187 MARC2Q969Z3 335 aa20.17■□□□□ 0.82
SNRPA1-215ENST00000561187 C20orf24Q9BUV8 137 aa20.17■□□□□ 0.82
SNRPA1-215ENST00000561187 MRPL27Q9P0M9 148 aaKnown RBP20.17■□□□□ 0.82
SNRPA1-215ENST00000561187 PGLYRP1O75594 196 aaPredicted RBP20.16■□□□□ 0.82
SNRPA1-215ENST00000561187 KRASP01116 189 aa20.16■□□□□ 0.82
SNRPA1-215ENST00000561187 C8orf88P0DMB2 117 aa20.16■□□□□ 0.82
SNRPA1-215ENST00000561187 UBE2NLQ5JXB2 153 aa20.16■□□□□ 0.82
SNRPA1-215ENST00000561187 OR1L8Q8NGR8 309 aa20.16■□□□□ 0.82
SNRPA1-215ENST00000561187 OR5H2Q8NGV7 314 aa20.16■□□□□ 0.82
SNRPA1-215ENST00000561187 MOB3AQ96BX8 217 aa20.16■□□□□ 0.82
SNRPA1-215ENST00000561187 S100A16Q96FQ6 103 aaKnown RBP20.16■□□□□ 0.82
SNRPA1-215ENST00000561187 SRSF8Q9BRL6 282 aaKnown RBP20.16■□□□□ 0.82
SNRPA1-215ENST00000561187 ZNF436Q9C0F3 470 aaPredicted RBP20.16■□□□□ 0.82
SNRPA1-215ENST00000561187 SERPINE2P07093 398 aa20.15■□□□□ 0.82
SNRPA1-215ENST00000561187 TSPAN14Q8NG11 270 aa20.15■□□□□ 0.82
SNRPA1-215ENST00000561187 VN1R17PQ8TDU5 208 aa20.15■□□□□ 0.82
SNRPA1-215ENST00000561187 CHRDL1Q9BU40 450 aa20.15■□□□□ 0.82
SNRPA1-215ENST00000561187 OR51B2Q9Y5P1 312 aa20.15■□□□□ 0.82
SNRPA1-215ENST00000561187 TRAV25A0A0B4J276 109 aa20.14■□□□□ 0.81
SNRPA1-215ENST00000561187 CYB5BO43169 146 aa20.14■□□□□ 0.81
SNRPA1-215ENST00000561187 F2RP25116 425 aa20.14■□□□□ 0.81
SNRPA1-215ENST00000561187 PHLDA2Q53GA4 152 aa20.14■□□□□ 0.81
SNRPA1-215ENST00000561187 OR2C3Q8N628 320 aa20.14■□□□□ 0.81
SNRPA1-215ENST00000561187 LSM10Q969L4 123 aaKnown RBP20.14■□□□□ 0.81
SNRPA1-215ENST00000561187 F11RQ9Y624 299 aaKnown RBP20.14■□□□□ 0.81
SNRPA1-215ENST00000561187 RPS19P39019 145 aaKnown RBP20.13■□□□□ 0.81
SNRPA1-215ENST00000561187 ELLP55199 621 aaPredicted RBP20.13■□□□□ 0.81
SNRPA1-215ENST00000561187 DEFB135Q30KP9 77 aa20.13■□□□□ 0.81
SNRPA1-215ENST00000561187 Q56UQ5 140 aa20.13■□□□□ 0.81
SNRPA1-215ENST00000561187 SLC38A6Q8IZM9 456 aa20.13■□□□□ 0.81
SNRPA1-215ENST00000561187 BORCS5Q969J3 196 aa20.13■□□□□ 0.81
SNRPA1-215ENST00000561187 DGCR14Q96DF8 476 aaKnown RBP20.13■□□□□ 0.81
SNRPA1-215ENST00000561187 NDUFA4L2Q9NRX3 87 aa20.13■□□□□ 0.81
SNRPA1-215ENST00000561187 C21orf62Q9NYP8 219 aa20.13■□□□□ 0.81
SNRPA1-215ENST00000561187 A0A0J9YWU9 116 aa20.12■□□□□ 0.81
SNRPA1-215ENST00000561187 CXorf65A6NEN9 183 aa20.12■□□□□ 0.81
SNRPA1-215ENST00000561187 HLA-DMAP28067 261 aa20.12■□□□□ 0.81
SNRPA1-215ENST00000561187 HRH1P35367 487 aa20.12■□□□□ 0.81
SNRPA1-215ENST00000561187 EWSR1Q01844 656 aaKnown RBP eCLIP20.12■□□□□ 0.81
SNRPA1-215ENST00000561187 KCTD21Q4G0X4 260 aa20.12■□□□□ 0.81
SNRPA1-215ENST00000561187 THOC7Q6I9Y2 204 aaKnown RBP20.12■□□□□ 0.81
SNRPA1-215ENST00000561187 SCARB1Q8WTV0 552 aa20.12■□□□□ 0.81
SNRPA1-215ENST00000561187 BSCL2Q96G97 398 aaPredicted RBP20.12■□□□□ 0.81
SNRPA1-215ENST00000561187 SPAG8Q99932 426 aaPredicted RBP20.12■□□□□ 0.81
SNRPA1-215ENST00000561187 C5orf66Q9H5L9 145 aa20.12■□□□□ 0.81
SNRPA1-215ENST00000561187 DAZ1Q9NQZ3 744 aaKnown RBP20.12■□□□□ 0.81
SNRPA1-215ENST00000561187 ANAPC10Q9UM13 185 aa20.12■□□□□ 0.81
SNRPA1-215ENST00000561187 DBX1A6NMT0 343 aa20.11■□□□□ 0.81
SNRPA1-215ENST00000561187 SNAPC5O75971 98 aa20.11■□□□□ 0.81
SNRPA1-215ENST00000561187 TAS2R46P59540 309 aa20.11■□□□□ 0.81
SNRPA1-215ENST00000561187 DHRS11Q6UWP2 260 aa20.11■□□□□ 0.81
SNRPA1-215ENST00000561187 F8W735 103 aaPredicted RBP20.1■□□□□ 0.81
SNRPA1-215ENST00000561187 K7EIM0 57 aa20.1■□□□□ 0.81
SNRPA1-215ENST00000561187 GPR31O00270 319 aa20.1■□□□□ 0.81
SNRPA1-215ENST00000561187 RPL35AP18077 110 aaKnown RBP20.1■□□□□ 0.81
SNRPA1-215ENST00000561187 ODF3L2Q3SX64 289 aa20.1■□□□□ 0.81
SNRPA1-215ENST00000561187 HSD17B13Q7Z5P4 300 aaPredicted RBP20.1■□□□□ 0.81
SNRPA1-215ENST00000561187 CMTM1Q8IZ96 169 aa20.1■□□□□ 0.81
SNRPA1-215ENST00000561187 IGHV3-49A0A0A0MS15 119 aa20.09■□□□□ 0.81
SNRPA1-215ENST00000561187 EIF4EP06730 217 aaKnown RBP20.09■□□□□ 0.81
SNRPA1-215ENST00000561187 ADMP35318 185 aa20.09■□□□□ 0.81
SNRPA1-215ENST00000561187 NDUFA4O00483 81 aa20.08■□□□□ 0.81
SNRPA1-215ENST00000561187 TSPAN4O14817 238 aa20.08■□□□□ 0.81
SNRPA1-215ENST00000561187 FGF2P09038 288 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms