RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 FXYD6Q9H0Q3 95 aa12.19□□□□□ -0.46
LMX1B-204ENST00000561065 TRBV9A0A0B4J1U6 114 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 TEX22C9J3V5 150 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 E7EUB6 86 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 CD74P04233 296 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 CRYGCP07315 174 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 IL6RP08887 468 aaPredicted RBP12.18□□□□□ -0.46
LMX1B-204ENST00000561065 PTBP1P26599 531 aaKnown RBP eCLIP12.18□□□□□ -0.46
LMX1B-204ENST00000561065 RND3P61587 244 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 SCGB2B2Q4G0G5 96 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 H2BFWTQ7Z2G1 175 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 SBSPONQ8IVN8 264 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 OR4A16Q8NH70 328 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 CXorf58Q96LI9 332 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 PRRT1Q99946 306 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 AKIP1Q9NQ31 210 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 PEMTQ9UBM1 199 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 SCP2D1Q9UJQ7 156 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 C14orf166Q9Y224 244 aaKnown RBP12.18□□□□□ -0.46
LMX1B-204ENST00000561065 CEPT1Q9Y6K0 416 aa12.18□□□□□ -0.46
LMX1B-204ENST00000561065 HMX3A6NHT5 357 aa12.17□□□□□ -0.46
LMX1B-204ENST00000561065 FRMD6-AS1P0C7T7 363 aa12.17□□□□□ -0.46
LMX1B-204ENST00000561065 FAUP35544 74 aaKnown RBP12.17□□□□□ -0.46
LMX1B-204ENST00000561065 PIGPP57054 158 aa12.17□□□□□ -0.46
LMX1B-204ENST00000561065 SYNJ2BPP57105 145 aa12.17□□□□□ -0.46
LMX1B-204ENST00000561065 AP3S2P59780 193 aa12.17□□□□□ -0.46
LMX1B-204ENST00000561065 OR2B8PP59922 312 aa12.17□□□□□ -0.46
LMX1B-204ENST00000561065 SURF2Q15527 256 aaPredicted RBP12.17□□□□□ -0.46
LMX1B-204ENST00000561065 LHFPL1Q86WI0 220 aa12.17□□□□□ -0.46
LMX1B-204ENST00000561065 OR9G4Q8NGQ1 327 aa12.17□□□□□ -0.46
LMX1B-204ENST00000561065 OR5B3Q8NH48 314 aa12.17□□□□□ -0.46
LMX1B-204ENST00000561065 SLIRPQ9GZT3 109 aaKnown RBP12.17□□□□□ -0.46
LMX1B-204ENST00000561065 NDUFA13Q9P0J0 144 aa12.17□□□□□ -0.46
LMX1B-204ENST00000561065 FBXL7Q9UJT9 491 aa12.17□□□□□ -0.46
LMX1B-204ENST00000561065 TRBV7-1A0A0A6YYK4 115 aa12.16□□□□□ -0.46
LMX1B-204ENST00000561065 PIGBOS1A0A0B4J2F0 54 aa12.16□□□□□ -0.46
LMX1B-204ENST00000561065 GSTZ1O43708 216 aaPredicted RBP12.16□□□□□ -0.46
LMX1B-204ENST00000561065 OR2J3O76001 311 aa12.16□□□□□ -0.46
LMX1B-204ENST00000561065 MYOD1P15172 320 aa12.16□□□□□ -0.46
LMX1B-204ENST00000561065 CTRB1P17538 263 aa12.16□□□□□ -0.46
LMX1B-204ENST00000561065 TNFSF8P32971 234 aa12.16□□□□□ -0.46
LMX1B-204ENST00000561065 G6PCP35575 357 aa12.16□□□□□ -0.46
LMX1B-204ENST00000561065 EXOSC2Q13868 293 aaKnown RBP12.16□□□□□ -0.46
LMX1B-204ENST00000561065 C15orf32Q32M92 178 aa12.16□□□□□ -0.46
LMX1B-204ENST00000561065 CTRB2Q6GPI1 263 aa12.16□□□□□ -0.46
LMX1B-204ENST00000561065 Q8N1Y9 231 aa12.16□□□□□ -0.46
LMX1B-204ENST00000561065 EEF1AKMT3Q96AZ1 226 aa12.16□□□□□ -0.46
LMX1B-204ENST00000561065 NXF2Q9GZY0 626 aaKnown RBP12.16□□□□□ -0.46
LMX1B-204ENST00000561065 OR51B2Q9Y5P1 312 aa12.16□□□□□ -0.46
LMX1B-204ENST00000561065 STARD9Q9P2P6 4700 aa12.16□□□□□ -0.46
LMX1B-204ENST00000561065 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.15□□□□□ -0.46
LMX1B-204ENST00000561065 H0Y980 276 aa12.15□□□□□ -0.46
LMX1B-204ENST00000561065 BMPR1BO00238 502 aa12.15□□□□□ -0.46
LMX1B-204ENST00000561065 FAM106AQ4KMX7 169 aa12.15□□□□□ -0.46
LMX1B-204ENST00000561065 ZNF585BQ52M93 769 aa12.15□□□□□ -0.46
LMX1B-204ENST00000561065 LSM10Q969L4 123 aaKnown RBP12.15□□□□□ -0.46
LMX1B-204ENST00000561065 RRNAD1Q96FB5 475 aaKnown RBP12.15□□□□□ -0.46
LMX1B-204ENST00000561065 HINT2Q9BX68 163 aa12.15□□□□□ -0.46
LMX1B-204ENST00000561065 CACFD1Q9UGQ2 172 aa12.15□□□□□ -0.46
LMX1B-204ENST00000561065 KCNIP3Q9Y2W7 256 aa12.15□□□□□ -0.46
LMX1B-204ENST00000561065 SACSQ9NZJ4 4579 aa12.15□□□□□ -0.46
LMX1B-204ENST00000561065 C3orf85A0A1B0GTC6 90 aa12.14□□□□□ -0.47
LMX1B-204ENST00000561065 TEX50A0A1B0GTY4 177 aa12.14□□□□□ -0.47
LMX1B-204ENST00000561065 GGCTO75223 188 aaKnown RBP12.14□□□□□ -0.47
LMX1B-204ENST00000561065 CTSDP07339 412 aaPredicted RBP12.14□□□□□ -0.47
LMX1B-204ENST00000561065 CSN3P07498 182 aa12.14□□□□□ -0.47
LMX1B-204ENST00000561065 OR13C7P0DN81 318 aa12.14□□□□□ -0.47
LMX1B-204ENST00000561065 MECP2P51608 486 aaKnown RBP12.14□□□□□ -0.47
LMX1B-204ENST00000561065 DEDD2Q8WXF8 326 aa12.14□□□□□ -0.47
LMX1B-204ENST00000561065 THAP7Q9BT49 309 aaPredicted RBP12.14□□□□□ -0.47
LMX1B-204ENST00000561065 DMRT1Q9Y5R6 373 aa12.14□□□□□ -0.47
LMX1B-204ENST00000561065 CSMD3Q7Z407 3707 aa12.14□□□□□ -0.47
LMX1B-204ENST00000561065 TEX13DA0A0J9YY54 714 aaPredicted RBP12.13□□□□□ -0.47
LMX1B-204ENST00000561065 CGB1A6NKQ9 187 aa12.13□□□□□ -0.47
LMX1B-204ENST00000561065 AREGP15514 252 aa12.13□□□□□ -0.47
LMX1B-204ENST00000561065 ERHP84090 104 aaKnown RBP12.13□□□□□ -0.47
LMX1B-204ENST00000561065 KLK9Q2XQG4 91 aa12.13□□□□□ -0.47
LMX1B-204ENST00000561065 TRIM16LQ309B1 348 aa12.13□□□□□ -0.47
LMX1B-204ENST00000561065 SPANXN2Q5MJ10 180 aa12.13□□□□□ -0.47
LMX1B-204ENST00000561065 RNASE11Q8TAA1 199 aaKnown RBP12.13□□□□□ -0.47
LMX1B-204ENST00000561065 PDCD10Q9BUL8 212 aa12.13□□□□□ -0.47
LMX1B-204ENST00000561065 NDUFA4L2Q9NRX3 87 aa12.13□□□□□ -0.47
LMX1B-204ENST00000561065 GAR1Q9NY12 217 aaKnown RBP12.13□□□□□ -0.47
LMX1B-204ENST00000561065 KLK9Q9UKQ9 250 aa12.13□□□□□ -0.47
LMX1B-204ENST00000561065 TRAV3A0A0B4J244 114 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 ANKRD20A5PA0PJZ0 165 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 IZUMO1RA6ND01 250 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 IGHV4-30-4P0DP06 118 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 EDN2P20800 178 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 AKR1C2P52895 323 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 PPP5CP53041 499 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 DHODHQ02127 395 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 PYDC2Q56P42 97 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 SLC25A24Q6NUK1 477 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 ADAMTSL5Q6ZMM2 481 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 GDPD1Q8N9F7 314 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 MARCH1Q8TCQ1 289 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 VN1R17PQ8TDU5 208 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 SEC22AQ96IW7 307 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 RCHY1Q96PM5 261 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms