RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 COMMD5Q9GZQ3 224 aa13.53□□□□□ -0.24
TPM1-226ENST00000560959 ACOT13Q9NPJ3 140 aa13.53□□□□□ -0.24
TPM1-226ENST00000560959 TAS2R8Q9NYW2 309 aa13.53□□□□□ -0.24
TPM1-226ENST00000560959 IFITM5A6NNB3 132 aa13.52□□□□□ -0.25
TPM1-226ENST00000560959 UPK2O00526 184 aa13.52□□□□□ -0.25
TPM1-226ENST00000560959 PDCD5O14737 125 aa13.52□□□□□ -0.25
TPM1-226ENST00000560959 SERPINE2P07093 398 aa13.52□□□□□ -0.25
TPM1-226ENST00000560959 ZNF124Q15973 351 aa13.52□□□□□ -0.25
TPM1-226ENST00000560959 CDNFQ49AH0 187 aa13.52□□□□□ -0.25
TPM1-226ENST00000560959 HACD4Q5VWC8 232 aa13.52□□□□□ -0.25
TPM1-226ENST00000560959 ZBTB34Q8NCN2 500 aa13.52□□□□□ -0.25
TPM1-226ENST00000560959 RNF2Q99496 336 aa13.52□□□□□ -0.25
TPM1-226ENST00000560959 CHRDL1Q9BU40 450 aa13.52□□□□□ -0.25
TPM1-226ENST00000560959 C21orf62Q9NYP8 219 aa13.52□□□□□ -0.25
TPM1-226ENST00000560959 MUC4Q99102 2169 aa13.52□□□□□ -0.25
TPM1-226ENST00000560959 C15orf61A6NNL5 157 aa13.51□□□□□ -0.25
TPM1-226ENST00000560959 CHEK1O14757 476 aa13.51□□□□□ -0.25
TPM1-226ENST00000560959 HPRT1P00492 218 aa13.51□□□□□ -0.25
TPM1-226ENST00000560959 CD5P06127 495 aa13.51□□□□□ -0.25
TPM1-226ENST00000560959 NQO2P16083 231 aa13.51□□□□□ -0.25
TPM1-226ENST00000560959 FABP5Q01469 135 aa13.51□□□□□ -0.25
TPM1-226ENST00000560959 SLC25A24Q6NUK1 477 aa13.51□□□□□ -0.25
TPM1-226ENST00000560959 SCN3BQ9NY72 215 aa13.51□□□□□ -0.25
TPM1-226ENST00000560959 ELF5Q9UKW6 265 aaPredicted RBP13.51□□□□□ -0.25
TPM1-226ENST00000560959 TRAV1-2A0A0B4J238 106 aa13.5□□□□□ -0.25
TPM1-226ENST00000560959 IGHV7-4-1A0A0J9YVY3 117 aa13.5□□□□□ -0.25
TPM1-226ENST00000560959 PRSS29PA6NIE9 313 aa13.5□□□□□ -0.25
TPM1-226ENST00000560959 F8W735 103 aaPredicted RBP13.5□□□□□ -0.25
TPM1-226ENST00000560959 DEFB4AO15263 64 aa13.5□□□□□ -0.25
TPM1-226ENST00000560959 CA1P00915 261 aaPredicted RBP13.5□□□□□ -0.25
TPM1-226ENST00000560959 HSMCR30P0CW71 290 aa13.5□□□□□ -0.25
TPM1-226ENST00000560959 MLLT11Q13015 90 aaPredicted RBP13.5□□□□□ -0.25
TPM1-226ENST00000560959 FAM90A2PQ658T7 463 aa13.5□□□□□ -0.25
TPM1-226ENST00000560959 SPAG16Q8N0X2 631 aa13.5□□□□□ -0.25
TPM1-226ENST00000560959 Q8NAQ8 132 aa13.5□□□□□ -0.25
TPM1-226ENST00000560959 TMEM116Q8NCL8 245 aa13.5□□□□□ -0.25
TPM1-226ENST00000560959 SCARB1Q8WTV0 552 aa13.5□□□□□ -0.25
TPM1-226ENST00000560959 OR10C1Q96KK4 312 aa13.5□□□□□ -0.25
TPM1-226ENST00000560959 RHPN1-AS1Q9BWJ2 59 aa13.5□□□□□ -0.25
TPM1-226ENST00000560959 PKD1P98161 4303 aa13.5□□□□□ -0.25
TPM1-226ENST00000560959 TRAV10A0A0B4J240 114 aa13.49□□□□□ -0.25
TPM1-226ENST00000560959 DFFBO76075 338 aa13.49□□□□□ -0.25
TPM1-226ENST00000560959 TRAPPC2P0DI81 140 aa13.49□□□□□ -0.25
TPM1-226ENST00000560959 TRAPPC2BP0DI82 140 aa13.49□□□□□ -0.25
TPM1-226ENST00000560959 OR13C7P0DN81 318 aa13.49□□□□□ -0.25
TPM1-226ENST00000560959 PAFAH1B2P68402 229 aa13.49□□□□□ -0.25
TPM1-226ENST00000560959 RELQ04864 619 aaPredicted RBP13.49□□□□□ -0.25
TPM1-226ENST00000560959 OR10W1Q8NGF6 305 aa13.49□□□□□ -0.25
TPM1-226ENST00000560959 CMTM3Q96MX0 182 aa13.49□□□□□ -0.25
TPM1-226ENST00000560959 RNF126Q9BV68 326 aa13.49□□□□□ -0.25
TPM1-226ENST00000560959 ANXA10Q9UJ72 324 aa13.49□□□□□ -0.25
TPM1-226ENST00000560959 IGHV4-4A0A075B6R2 117 aa13.48□□□□□ -0.25
TPM1-226ENST00000560959 TRAV3A0A0B4J244 114 aa13.48□□□□□ -0.25
TPM1-226ENST00000560959 ZNF207O43670 478 aaKnown RBP13.48□□□□□ -0.25
TPM1-226ENST00000560959 CTSGP08311 255 aa13.48□□□□□ -0.25
TPM1-226ENST00000560959 WT1-ASQ06250 92 aa13.48□□□□□ -0.25
TPM1-226ENST00000560959 TMEM41BQ5BJD5 291 aa13.48□□□□□ -0.25
TPM1-226ENST00000560959 PVRIGQ6DKI7 326 aa13.48□□□□□ -0.25
TPM1-226ENST00000560959 ATG5Q9H1Y0 275 aa13.48□□□□□ -0.25
TPM1-226ENST00000560959 PLEKHA2Q9HB19 425 aa13.48□□□□□ -0.25
TPM1-226ENST00000560959 F11RQ9Y624 299 aaKnown RBP13.48□□□□□ -0.25
TPM1-226ENST00000560959 IGHV3OR16-8A0A075B7F1 116 aa13.47□□□□□ -0.25
TPM1-226ENST00000560959 RTL8CO15255 209 aa13.47□□□□□ -0.25
TPM1-226ENST00000560959 MIFP14174 115 aa13.47□□□□□ -0.25
TPM1-226ENST00000560959 OR10A3P58181 314 aa13.47□□□□□ -0.25
TPM1-226ENST00000560959 CADM3Q8N126 398 aa13.47□□□□□ -0.25
TPM1-226ENST00000560959 CENPSQ8N2Z9 138 aa13.47□□□□□ -0.25
TPM1-226ENST00000560959 POM121L12Q8N7R1 296 aa13.47□□□□□ -0.25
TPM1-226ENST00000560959 OR1L8Q8NGR8 309 aa13.47□□□□□ -0.25
TPM1-226ENST00000560959 DGCR14Q96DF8 476 aaKnown RBP13.47□□□□□ -0.25
TPM1-226ENST00000560959 GPHA2Q96T91 129 aa13.47□□□□□ -0.25
TPM1-226ENST00000560959 CCL28Q9NRJ3 127 aa13.47□□□□□ -0.25
TPM1-226ENST00000560959 TMEM140Q9NV12 185 aa13.47□□□□□ -0.25
TPM1-226ENST00000560959 TRAV14DV4A0A0A6YYC5 116 aa13.46□□□□□ -0.25
TPM1-226ENST00000560959 TEX50A0A1B0GTY4 177 aa13.46□□□□□ -0.25
TPM1-226ENST00000560959 K7EIM0 57 aa13.46□□□□□ -0.25
TPM1-226ENST00000560959 TNFSF12O43508 249 aa13.46□□□□□ -0.25
TPM1-226ENST00000560959 HLA-DMBP28068 263 aa13.46□□□□□ -0.25
TPM1-226ENST00000560959 TFPI2P48307 235 aa13.46□□□□□ -0.25
TPM1-226ENST00000560959 CATR1Q13166 79 aa13.46□□□□□ -0.25
TPM1-226ENST00000560959 RCN1Q15293 331 aa13.46□□□□□ -0.25
TPM1-226ENST00000560959 ZNF414Q96IQ9 312 aa13.46□□□□□ -0.25
TPM1-226ENST00000560959 CCDC90BQ9GZT6 254 aa13.46□□□□□ -0.25
TPM1-226ENST00000560959 DUSP21Q9H596 190 aa13.46□□□□□ -0.25
TPM1-226ENST00000560959 NDUFA4L2Q9NRX3 87 aa13.46□□□□□ -0.25
TPM1-226ENST00000560959 TRAV2A0A0B4J234 112 aa13.45□□□□□ -0.26
TPM1-226ENST00000560959 NUPL2O15504 423 aaKnown RBP13.45□□□□□ -0.26
TPM1-226ENST00000560959 SCGNO76038 276 aa13.45□□□□□ -0.26
TPM1-226ENST00000560959 RBMY1A1P0DJD3 496 aaKnown RBP13.45□□□□□ -0.26
TPM1-226ENST00000560959 RBMY1CP0DJD4 496 aa13.45□□□□□ -0.26
TPM1-226ENST00000560959 P0DMU3 169 aa13.45□□□□□ -0.26
TPM1-226ENST00000560959 FAM231AP0DMU4 169 aa13.45□□□□□ -0.26
TPM1-226ENST00000560959 FAM231CP0DMU5 169 aa13.45□□□□□ -0.26
TPM1-226ENST00000560959 RBMY1FQ15415 496 aaKnown RBP13.45□□□□□ -0.26
TPM1-226ENST00000560959 LGALS9BQ3B8N2 356 aa13.45□□□□□ -0.26
TPM1-226ENST00000560959 Q56UQ5 140 aa13.45□□□□□ -0.26
TPM1-226ENST00000560959 ZNF773Q6PK81 442 aa13.45□□□□□ -0.26
TPM1-226ENST00000560959 DMBX1Q8NFW5 382 aa13.45□□□□□ -0.26
TPM1-226ENST00000560959 SECTM1Q8WVN6 248 aa13.45□□□□□ -0.26
TPM1-226ENST00000560959 LSM10Q969L4 123 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms