RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 MRGPRFQ96AM1 343 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 EEF1AKMT3Q96AZ1 226 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 FKBP11Q9NYL4 201 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 THYN1Q9P016 225 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 PRNDQ9UKY0 176 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 C14orf166Q9Y224 244 aaKnown RBP9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 PRKDCP78527 4128 aaKnown RBP9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 C3orf85A0A1B0GTC6 90 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 IGLC7A0M8Q6 106 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 PPP5D1E7EU14 171 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 CTDSPLO15194 276 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 NDUFB8O95169 186 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 FGF2P09038 288 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 AKAIN1P0CW23 69 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 OR13C7P0DN81 318 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 SPNP16150 400 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 S100A5P33763 92 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 AKR1C2P52895 323 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 KLF5Q13887 457 aaPredicted RBP9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 TRIM16LQ309B1 348 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 FAM209BQ5JX69 171 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 THOC7Q6I9Y2 204 aaKnown RBP9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 SLC25A24Q6NUK1 477 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 HAPLN4Q86UW8 402 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 LHFPL1Q86WI0 220 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 OR13C8Q8NGS7 320 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 RNASE11Q8TAA1 199 aaKnown RBP9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 TMEM56Q96MV1 263 aa9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 FAM212BQ9NTI7 297 aaPredicted RBP9.94□□□□□ -0.82
CTDSPL2-209ENST00000560620 TEX13DA0A0J9YY54 714 aaPredicted RBP9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 H0Y980 276 aa9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 BMPR1BO00238 502 aa9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 HLA-AP01891 365 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 ARL3P36405 182 aa9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 RND3P61587 244 aa9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 PYDC2Q56P42 97 aa9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 CLEC19AQ6UXS0 136 aa9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 HSD17B13Q7Z5P4 300 aaPredicted RBP9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 OR4C16Q8NGL9 310 aa9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 LSM10Q969L4 123 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 SEC22AQ96IW7 307 aa9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 CXorf58Q96LI9 332 aa9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 FANCD2OSQ96PS1 177 aa9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 TP53RKQ96S44 253 aa9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 SRSF8Q9BRL6 282 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 MCUBQ9NWR8 336 aa9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 PEMTQ9UBM1 199 aa9.93□□□□□ -0.82
CTDSPL2-209ENST00000560620 IGLV11-55A0A075B6I3 123 aa9.92□□□□□ -0.82
CTDSPL2-209ENST00000560620 C15orf61A6NNL5 157 aa9.92□□□□□ -0.82
CTDSPL2-209ENST00000560620 GGCTO75223 188 aaKnown RBP9.92□□□□□ -0.82
CTDSPL2-209ENST00000560620 ATG12O94817 140 aa9.92□□□□□ -0.82
CTDSPL2-209ENST00000560620 IGKV1-39P01597 117 aa9.92□□□□□ -0.82
CTDSPL2-209ENST00000560620 IGKV1D-39P04432 117 aa9.92□□□□□ -0.82
CTDSPL2-209ENST00000560620 SP6Q3SY56 376 aa9.92□□□□□ -0.82
CTDSPL2-209ENST00000560620 GDPD1Q8N9F7 314 aa9.92□□□□□ -0.82
CTDSPL2-209ENST00000560620 OR51S1Q8NGJ8 323 aa9.92□□□□□ -0.82
CTDSPL2-209ENST00000560620 OR5B3Q8NH48 314 aa9.92□□□□□ -0.82
CTDSPL2-209ENST00000560620 PRRT1Q99946 306 aa9.92□□□□□ -0.82
CTDSPL2-209ENST00000560620 ZC4H2Q9NQZ6 224 aa9.92□□□□□ -0.82
CTDSPL2-209ENST00000560620 NDUFA4L2Q9NRX3 87 aa9.92□□□□□ -0.82
CTDSPL2-209ENST00000560620 TRBV7-1A0A0A6YYK4 115 aa9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 ANKRD20A5PA0PJZ0 165 aa9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 ZNF320A2RRD8 509 aa9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 MFSD2BA6NFX1 497 aa9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 GSTZ1O43708 216 aaPredicted RBP9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 OR2C1O95371 312 aa9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 CTSDP07339 412 aaPredicted RBP9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 GP9P14770 177 aa9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 PTBP1P26599 531 aaKnown RBP eCLIP9.91□□□□□ -0.824e-6■■■■■ 31.7
CTDSPL2-209ENST00000560620 WT1-ASQ06250 92 aa9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 RRNAD1Q96FB5 475 aaKnown RBP9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 CCDC140Q96MF4 163 aa9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 THAP7Q9BT49 309 aaPredicted RBP9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 PDCD10Q9BUL8 212 aa9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 NXF2Q9GZY0 626 aaKnown RBP9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 TMEM14BQ9NUH8 114 aa9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 SCP2D1Q9UJQ7 156 aa9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 SMAD5-AS1Q9Y6J3 95 aa9.91□□□□□ -0.82
CTDSPL2-209ENST00000560620 DBX1A6NMT0 343 aa9.9□□□□□ -0.82
CTDSPL2-209ENST00000560620 IFNA17P01571 189 aa9.9□□□□□ -0.82
CTDSPL2-209ENST00000560620 IGLV1-51P01701 117 aa9.9□□□□□ -0.82
CTDSPL2-209ENST00000560620 CLEC3BP05452 202 aa9.9□□□□□ -0.82
CTDSPL2-209ENST00000560620 GPR183P32249 361 aa9.9□□□□□ -0.82
CTDSPL2-209ENST00000560620 FAUP35544 74 aaKnown RBP9.9□□□□□ -0.82
CTDSPL2-209ENST00000560620 IZUMO4Q1ZYL8 232 aa9.9□□□□□ -0.82
CTDSPL2-209ENST00000560620 FAM106AQ4KMX7 169 aa9.9□□□□□ -0.82
CTDSPL2-209ENST00000560620 CADM3Q8N126 398 aa9.9□□□□□ -0.82
CTDSPL2-209ENST00000560620 DYNLRB2Q8TF09 96 aa9.9□□□□□ -0.82
CTDSPL2-209ENST00000560620 B9D2Q9BPU9 175 aa9.9□□□□□ -0.82
CTDSPL2-209ENST00000560620 LSM4Q9Y4Z0 139 aaKnown RBP9.9□□□□□ -0.82
CTDSPL2-209ENST00000560620 IGHV3-21A0A0B4J1V1 117 aa9.89□□□□□ -0.83
CTDSPL2-209ENST00000560620 B3GALNT1O75752 331 aa9.89□□□□□ -0.83
CTDSPL2-209ENST00000560620 CSN3P07498 182 aa9.89□□□□□ -0.83
CTDSPL2-209ENST00000560620 OR5AC1P0C628 307 aa9.89□□□□□ -0.83
CTDSPL2-209ENST00000560620 AP3S2P59780 193 aa9.89□□□□□ -0.83
CTDSPL2-209ENST00000560620 SURF2Q15527 256 aaPredicted RBP9.89□□□□□ -0.83
CTDSPL2-209ENST00000560620 SPINK9Q5DT21 86 aa9.89□□□□□ -0.83
CTDSPL2-209ENST00000560620 LCN12Q6JVE5 192 aa9.89□□□□□ -0.83
CTDSPL2-209ENST00000560620 PLET1Q6UQ28 207 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms