RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 DUSP13Q9UII6 198 aa20.24■□□□□ 0.83
SHF-207ENST00000560540 POLR3KQ9Y2Y1 108 aaPredicted RBP20.24■□□□□ 0.83
SHF-207ENST00000560540 ARL2-SNX15V9GYD0 113 aa20.24■□□□□ 0.83
SHF-207ENST00000560540 TRAV3A0A0B4J244 114 aa20.23■□□□□ 0.83
SHF-207ENST00000560540 IGHV2OR16-5A0A0B4J2B6 119 aa20.23■□□□□ 0.83
SHF-207ENST00000560540 EREGO14944 169 aa20.23■□□□□ 0.83
SHF-207ENST00000560540 ESDP10768 282 aa20.23■□□□□ 0.83
SHF-207ENST00000560540 SELLP14151 372 aa20.23■□□□□ 0.83
SHF-207ENST00000560540 TEPPQ6URK8 271 aa20.23■□□□□ 0.83
SHF-207ENST00000560540 CMTM2Q8TAZ6 248 aa20.23■□□□□ 0.83
SHF-207ENST00000560540 PRORYQ9H606 182 aa20.23■□□□□ 0.83
SHF-207ENST00000560540 CFHR2P36980 270 aa20.23■□□□□ 0.83
SHF-207ENST00000560540 RPL29P47914 159 aaKnown RBP20.23■□□□□ 0.83
SHF-207ENST00000560540 RPL31P62899 125 aaKnown RBP20.23■□□□□ 0.83
SHF-207ENST00000560540 ARSJQ5FYB0 599 aaPredicted RBP20.23■□□□□ 0.83
SHF-207ENST00000560540 VWA1Q6PCB0 445 aa20.23■□□□□ 0.83
SHF-207ENST00000560540 TGIF2LXQ8IUE1 241 aa20.23■□□□□ 0.83
SHF-207ENST00000560540 FOXA2Q9Y261 457 aaPredicted RBP20.23■□□□□ 0.83
SHF-207ENST00000560540 EPG5Q9HCE0 2579 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 TRGV10A0A0A0MS01 117 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 A0A1B0GUS0 222 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 FNDC10F2Z333 226 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 NUPR1O60356 82 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 AREGP15514 252 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 RAB7AP51149 207 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 PAFAH1B2P68402 229 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 RAB31Q13636 194 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 STPG3Q8N7X2 389 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 SSMEM1Q8WWF3 244 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 PLPPR2Q96GM1 343 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 UHRF2Q96PU4 802 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 TMEM8BA6NDV4 472 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 NPY1RP25929 384 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 ZNF134P52741 427 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 ZNF90Q03938 601 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.22■□□□□ 0.83
SHF-207ENST00000560540 SLC24A4Q8NFF2 622 aa20.22■□□□□ 0.83
SHF-207ENST00000560540 IGHV1-18A0A0C4DH31 117 aa20.21■□□□□ 0.83
SHF-207ENST00000560540 K7EN84 100 aa20.21■□□□□ 0.83
SHF-207ENST00000560540 SFXN3Q9BWM7 321 aa20.21■□□□□ 0.83
SHF-207ENST00000560540 TMEM14BQ9NUH8 114 aa20.21■□□□□ 0.83
SHF-207ENST00000560540 SMG1Q96Q15 3661 aaKnown RBP20.21■□□□□ 0.83
SHF-207ENST00000560540 A8MXE2 369 aa20.2■□□□□ 0.82
SHF-207ENST00000560540 TPPP2P59282 170 aa20.2■□□□□ 0.82
SHF-207ENST00000560540 C9orf106Q8NAJ2 232 aa20.2■□□□□ 0.82
SHF-207ENST00000560540 OR2Z1Q8NG97 314 aa20.2■□□□□ 0.82
SHF-207ENST00000560540 NEU1Q99519 415 aa20.2■□□□□ 0.82
SHF-207ENST00000560540 NCOR1P1Q9H4R4 102 aa20.2■□□□□ 0.82
SHF-207ENST00000560540 SEPSECSQ9HD40 501 aaKnown RBP20.2■□□□□ 0.82
SHF-207ENST00000560540 CORO2AQ92828 525 aa20.2■□□□□ 0.82
SHF-207ENST00000560540 RAB9BQ9NP90 201 aa20.2■□□□□ 0.82
SHF-207ENST00000560540 CALYQ9NYX4 217 aa20.2■□□□□ 0.82
SHF-207ENST00000560540 HSPE1P61604 102 aaKnown RBP20.19■□□□□ 0.82
SHF-207ENST00000560540 PRR20EP86478 221 aa20.19■□□□□ 0.82
SHF-207ENST00000560540 PRR20CP86479 221 aa20.19■□□□□ 0.82
SHF-207ENST00000560540 PRR20DP86480 221 aa20.19■□□□□ 0.82
SHF-207ENST00000560540 PRR20BP86481 221 aa20.19■□□□□ 0.82
SHF-207ENST00000560540 PRR20AP86496 221 aa20.19■□□□□ 0.82
SHF-207ENST00000560540 EAF1Q96JC9 268 aaPredicted RBP20.19■□□□□ 0.82
SHF-207ENST00000560540 SNHG12Q9BXW3 62 aa20.19■□□□□ 0.82
SHF-207ENST00000560540 SLC25A10Q9UBX3 287 aaPredicted RBP20.19■□□□□ 0.82
SHF-207ENST00000560540 TP53TG3Q9ULZ0 132 aa20.19■□□□□ 0.82
SHF-207ENST00000560540 RP1L1Q8IWN7 2480 aaPredicted RBP20.19■□□□□ 0.82
SHF-207ENST00000560540 CRYABP02511 175 aaKnown RBP20.18■□□□□ 0.82
SHF-207ENST00000560540 HNF1AP20823 631 aa20.18■□□□□ 0.82
SHF-207ENST00000560540 THBS3P49746 956 aa20.18■□□□□ 0.82
SHF-207ENST00000560540 LGALS4P56470 323 aa20.18■□□□□ 0.82
SHF-207ENST00000560540 PRR30Q53SZ7 412 aaPredicted RBP20.18■□□□□ 0.82
SHF-207ENST00000560540 SPATA31B1PQ5VZV4 182 aa20.18■□□□□ 0.82
SHF-207ENST00000560540 GCSAMQ8N6F7 178 aa20.18■□□□□ 0.82
SHF-207ENST00000560540 FAM169BQ8N8A8 192 aa20.18■□□□□ 0.82
SHF-207ENST00000560540 MRPL18Q9H0U6 180 aaKnown RBP20.18■□□□□ 0.82
SHF-207ENST00000560540 PLSCR4Q9NRQ2 329 aa20.18■□□□□ 0.82
SHF-207ENST00000560540 TMEM106BQ9NUM4 274 aa20.18■□□□□ 0.82
SHF-207ENST00000560540 USP24Q9UPU5 2620 aa20.18■□□□□ 0.82
SHF-207ENST00000560540 TRBV9A0A0B4J1U6 114 aa20.18■□□□□ 0.82
SHF-207ENST00000560540 TCAPO15273 167 aa20.18■□□□□ 0.82
SHF-207ENST00000560540 CBLN1P23435 193 aa20.18■□□□□ 0.82
SHF-207ENST00000560540 RANP62826 216 aaKnown RBP20.18■□□□□ 0.82
SHF-207ENST00000560540 HLA-DRB5Q30154 266 aa20.18■□□□□ 0.82
SHF-207ENST00000560540 MRPL52Q86TS9 123 aaKnown RBP20.18■□□□□ 0.82
SHF-207ENST00000560540 NEUROG1Q92886 237 aa20.18■□□□□ 0.82
SHF-207ENST00000560540 GRIFINA4D1Z8 144 aa20.17■□□□□ 0.82
SHF-207ENST00000560540 M0R143 59 aa20.17■□□□□ 0.82
SHF-207ENST00000560540 CGB3P0DN86 165 aa20.17■□□□□ 0.82
SHF-207ENST00000560540 CGB7P0DN87 165 aa20.17■□□□□ 0.82
SHF-207ENST00000560540 OR4A47Q6IF82 309 aa20.17■□□□□ 0.82
SHF-207ENST00000560540 ENY2Q9NPA8 101 aa20.17■□□□□ 0.82
SHF-207ENST00000560540 CRISP2P16562 243 aa20.17■□□□□ 0.82
SHF-207ENST00000560540 LINC00310P59036 64 aa20.17■□□□□ 0.82
SHF-207ENST00000560540 POU2AF1Q16633 256 aa20.17■□□□□ 0.82
SHF-207ENST00000560540 RPEL1Q2QD12 228 aa20.17■□□□□ 0.82
SHF-207ENST00000560540 SARAFQ96BY9 339 aa20.17■□□□□ 0.82
SHF-207ENST00000560540 CBLN4Q9NTU7 201 aa20.17■□□□□ 0.82
SHF-207ENST00000560540 C1orf229Q6ZS94 237 aaPredicted RBP20.16■□□□□ 0.82
SHF-207ENST00000560540 OR4P4Q8NGL7 312 aa20.16■□□□□ 0.82
SHF-207ENST00000560540 OR1L6Q8NGR2 347 aa20.16■□□□□ 0.82
SHF-207ENST00000560540 ADTRPQ96IZ2 230 aa20.16■□□□□ 0.82
SHF-207ENST00000560540 TBX15Q96SF7 602 aa20.16■□□□□ 0.82
SHF-207ENST00000560540 CA2P00918 260 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms