RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 GADD45AP24522 165 aa12.04□□□□□ -0.48
HERC1-207ENST00000560316 SLC25A24Q6NUK1 477 aa12.04□□□□□ -0.48
HERC1-207ENST00000560316 SPSB3Q6PJ21 355 aa12.04□□□□□ -0.48
HERC1-207ENST00000560316 RNF126Q9BV68 326 aa12.04□□□□□ -0.48
HERC1-207ENST00000560316 RHPN1-AS1Q9BWJ2 59 aa12.04□□□□□ -0.48
HERC1-207ENST00000560316 PLCXD1Q9NUJ7 323 aa12.04□□□□□ -0.48
HERC1-207ENST00000560316 LSM2Q9Y333 95 aaKnown RBP12.04□□□□□ -0.48
HERC1-207ENST00000560316 IGHV7-4-1A0A0J9YVY3 117 aa12.03□□□□□ -0.48
HERC1-207ENST00000560316 C15orf61A6NNL5 157 aa12.03□□□□□ -0.48
HERC1-207ENST00000560316 C15orf62A8K5M9 175 aa12.03□□□□□ -0.48
HERC1-207ENST00000560316 F8W735 103 aaPredicted RBP12.03□□□□□ -0.48
HERC1-207ENST00000560316 RPS25P62851 125 aaKnown RBP12.03□□□□□ -0.48
HERC1-207ENST00000560316 SPHARQ15513 63 aa12.03□□□□□ -0.48
HERC1-207ENST00000560316 LEMD1Q68G75 181 aa12.03□□□□□ -0.48
HERC1-207ENST00000560316 DHRSXQ8N5I4 330 aa12.03□□□□□ -0.48
HERC1-207ENST00000560316 UBAC2Q8NBM4 344 aa12.03□□□□□ -0.48
HERC1-207ENST00000560316 TMEM116Q8NCL8 245 aa12.03□□□□□ -0.48
HERC1-207ENST00000560316 ZNF414Q96IQ9 312 aa12.03□□□□□ -0.48
HERC1-207ENST00000560316 V9GY05 133 aa12.03□□□□□ -0.48
HERC1-207ENST00000560316 IGHV3OR16-13A0A075B7E8 117 aa12.02□□□□□ -0.49
HERC1-207ENST00000560316 ELOA3CA0A087WX78 387 aaPredicted RBP12.02□□□□□ -0.49
HERC1-207ENST00000560316 IGHV3-74A0A0B4J1X5 117 aa12.02□□□□□ -0.49
HERC1-207ENST00000560316 TNFSF12O43508 249 aa12.02□□□□□ -0.49
HERC1-207ENST00000560316 CALRP27797 417 aaKnown RBP12.02□□□□□ -0.49
HERC1-207ENST00000560316 SSX1Q16384 188 aa12.02□□□□□ -0.49
HERC1-207ENST00000560316 C10orf67Q8IYJ2 551 aa12.02□□□□□ -0.49
HERC1-207ENST00000560316 C8orf59Q8N0T1 100 aaPredicted RBP12.02□□□□□ -0.49
HERC1-207ENST00000560316 GDPD1Q8N9F7 314 aa12.02□□□□□ -0.49
HERC1-207ENST00000560316 SCARB1Q8WTV0 552 aa12.02□□□□□ -0.49
HERC1-207ENST00000560316 UFD1Q92890 307 aa12.02□□□□□ -0.49
HERC1-207ENST00000560316 COMMD5Q9GZQ3 224 aa12.02□□□□□ -0.49
HERC1-207ENST00000560316 C21orf62Q9NYP8 219 aa12.02□□□□□ -0.49
HERC1-207ENST00000560316 UPK2O00526 184 aa12.01□□□□□ -0.49
HERC1-207ENST00000560316 ARL6IP5O75915 188 aa12.01□□□□□ -0.49
HERC1-207ENST00000560316 P0DMU3 169 aa12.01□□□□□ -0.49
HERC1-207ENST00000560316 FAM231AP0DMU4 169 aa12.01□□□□□ -0.49
HERC1-207ENST00000560316 FAM231CP0DMU5 169 aa12.01□□□□□ -0.49
HERC1-207ENST00000560316 OR13C7P0DN81 318 aa12.01□□□□□ -0.49
HERC1-207ENST00000560316 DTYMKP23919 212 aa12.01□□□□□ -0.49
HERC1-207ENST00000560316 LGALS9BQ3B8N2 356 aa12.01□□□□□ -0.49
HERC1-207ENST00000560316 Q56UQ5 140 aa12.01□□□□□ -0.49
HERC1-207ENST00000560316 ZNF66Q6ZN08 573 aa12.01□□□□□ -0.49
HERC1-207ENST00000560316 ZNF767PQ75MW2 155 aa12.01□□□□□ -0.49
HERC1-207ENST00000560316 SRSF8Q9BRL6 282 aaKnown RBP12.01□□□□□ -0.49
HERC1-207ENST00000560316 SCRT1Q9BWW7 348 aa12.01□□□□□ -0.49
HERC1-207ENST00000560316 QTRT1Q9BXR0 403 aaKnown RBP12.01□□□□□ -0.49
HERC1-207ENST00000560316 CYB5BO43169 146 aa12□□□□□ -0.49
HERC1-207ENST00000560316 AMBPP02760 352 aa12□□□□□ -0.49
HERC1-207ENST00000560316 SERPINE2P07093 398 aa12□□□□□ -0.49
HERC1-207ENST00000560316 GIG44P09565 113 aaPredicted RBP12□□□□□ -0.49
HERC1-207ENST00000560316 CTXN2P0C2S0 81 aa12□□□□□ -0.49
HERC1-207ENST00000560316 DEFB131AP59861 70 aa12□□□□□ -0.49
HERC1-207ENST00000560316 WT1-ASQ06250 92 aa12□□□□□ -0.49
HERC1-207ENST00000560316 FAM90A2PQ658T7 463 aa12□□□□□ -0.49
HERC1-207ENST00000560316 SPAG16Q8N0X2 631 aa12□□□□□ -0.49
HERC1-207ENST00000560316 CENPSQ8N2Z9 138 aa12□□□□□ -0.49
HERC1-207ENST00000560316 CMTM3Q96MX0 182 aa12□□□□□ -0.49
HERC1-207ENST00000560316 IGLV2-18A0A075B6J9 118 aa11.99□□□□□ -0.49
HERC1-207ENST00000560316 DEFB131BA0A096LNP1 70 aa11.99□□□□□ -0.49
HERC1-207ENST00000560316 PTGES3LE9PB15 166 aa11.99□□□□□ -0.49
HERC1-207ENST00000560316 YIF1AO95070 293 aa11.99□□□□□ -0.49
HERC1-207ENST00000560316 CTSGP08311 255 aa11.99□□□□□ -0.49
HERC1-207ENST00000560316 MIFP14174 115 aa11.99□□□□□ -0.49
HERC1-207ENST00000560316 GIMAP1Q8WWP7 306 aa11.99□□□□□ -0.49
HERC1-207ENST00000560316 AIFM2Q9BRQ8 373 aa11.99□□□□□ -0.49
HERC1-207ENST00000560316 CELA1Q9UNI1 258 aa11.99□□□□□ -0.49
HERC1-207ENST00000560316 K7EIM0 57 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 NUPL2O15504 423 aaKnown RBP11.98□□□□□ -0.49
HERC1-207ENST00000560316 HSMCR30P0CW71 290 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 TRAPPC2P0DI81 140 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 TRAPPC2BP0DI82 140 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 RAB6AP20340 208 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 RANBP1P43487 201 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 OR10A3P58181 314 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 PAFAH1B2P68402 229 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 C12orf74Q32Q52 190 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 CDNFQ49AH0 187 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 CNIH2Q6PI25 160 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 TCF24Q7RTU0 167 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 STHQ8IWL8 128 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 FAM24BQ8N5W8 94 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 SECTM1Q8WVN6 248 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 ATP6V0BQ99437 205 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 NDUFAF3Q9BU61 184 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 CCL28Q9NRJ3 127 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 TMEM140Q9NV12 185 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 F11RQ9Y624 299 aaKnown RBP11.98□□□□□ -0.49
HERC1-207ENST00000560316 X6R8D5 127 aa11.98□□□□□ -0.49
HERC1-207ENST00000560316 TRAV14DV4A0A0A6YYC5 116 aa11.97□□□□□ -0.49
HERC1-207ENST00000560316 TEX50A0A1B0GTY4 177 aa11.97□□□□□ -0.49
HERC1-207ENST00000560316 SULT1C2O00338 296 aa11.97□□□□□ -0.49
HERC1-207ENST00000560316 NQO2P16083 231 aa11.97□□□□□ -0.49
HERC1-207ENST00000560316 TAS2R31P59538 309 aa11.97□□□□□ -0.49
HERC1-207ENST00000560316 FABP5Q01469 135 aa11.97□□□□□ -0.49
HERC1-207ENST00000560316 ZNF773Q6PK81 442 aa11.97□□□□□ -0.49
HERC1-207ENST00000560316 MAPKAPK5-AS1Q8N8E1 139 aa11.97□□□□□ -0.49
HERC1-207ENST00000560316 NUDCD2Q8WVJ2 157 aa11.97□□□□□ -0.49
HERC1-207ENST00000560316 OR10C1Q96KK4 312 aa11.97□□□□□ -0.49
HERC1-207ENST00000560316 ATG5Q9H1Y0 275 aa11.97□□□□□ -0.49
HERC1-207ENST00000560316 MS4A6AQ9H2W1 248 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms