RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 CDK10Q15131 360 aa9.36□□□□□ -0.91
RABGGTA-213ENST00000560127 CLVS1Q8IUQ0 354 aaPredicted RBP9.36□□□□□ -0.91
RABGGTA-213ENST00000560127 MMD2Q8IY49 270 aa9.36□□□□□ -0.91
RABGGTA-213ENST00000560127 MIXL1Q9H2W2 232 aa9.36□□□□□ -0.91
RABGGTA-213ENST00000560127 DNAH5Q8TE73 4624 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 IGKV1D-13A0A0B4J2D9 117 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 IGHV3-35A0A0C4DH35 117 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 A0A1B0GW64 132 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 MEIS3P1A6NDR6 274 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 LINC00473A8K010 186 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 MPTX1A8MV57 137 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 C11orf94C9JXX5 98 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 E7EUB6 86 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 HPGDSO60760 199 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 IGLV2-14P01704 120 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 HLA-DQB1P01920 261 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 FCER2P06734 321 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 IGKV1-13P0DP09 117 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 ELK1P19419 428 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 ELLP55199 621 aaPredicted RBP9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 GNG2P59768 71 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 ARL6IP1Q15041 203 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 ZNF124Q15973 351 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 KLK9Q2XQG4 91 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 HOGA1Q86XE5 327 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 APRG1Q8IVJ8 170 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 OSR1Q8TAX0 266 aaPredicted RBP9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 CD300LFQ8TDQ1 290 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 RBM38Q9H0Z9 239 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 COMMD3Q9UBI1 195 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 KLK9Q9UKQ9 250 aa9.35□□□□□ -0.91
RABGGTA-213ENST00000560127 IGHV4-4A0A075B6R2 117 aa9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 MFSD2BA6NFX1 497 aa9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 M0R2N4 97 aa9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 CREBL2O60519 120 aaPredicted RBP9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 CRYGCP07315 174 aa9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 AREGP15514 252 aa9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 NFYAP23511 347 aaPredicted RBP9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 PSMB6P28072 239 aa9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 DUTP33316 252 aaKnown RBP9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 TALDO1P37837 337 aa9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 RPL5P46777 297 aaKnown RBP9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 MRPS15P82914 257 aaKnown RBP9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 EIF4EBP1Q13541 118 aaPredicted RBP9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 DYNC2LI1Q8TCX1 351 aa9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 FYTTD1Q96QD9 318 aaKnown RBP9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 SLC2A9Q9NRM0 540 aa9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 ANXA10Q9UJ72 324 aa9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 UFC1Q9Y3C8 167 aa9.34□□□□□ -0.91
RABGGTA-213ENST00000560127 NACAE9PAV3 2078 aa9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 TRBV7-1A0A0A6YYK4 115 aa9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 DPPA5A6NC42 116 aa9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 H3BMQ9 156 aa9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 APOA1P02647 267 aa9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 MYOD1P15172 320 aa9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 GPR183P32249 361 aa9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 TMEM69Q5SWH9 247 aa9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 ZNF645Q8N7E2 425 aa9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 BEST4Q8NFU0 473 aa9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 OR4A5Q8NH83 315 aa9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 OR10J5Q8NHC4 309 aa9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 ADTRPQ96IZ2 230 aa9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 ZNF436Q9C0F3 470 aaPredicted RBP9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 C6orf62Q9GZU0 229 aaPredicted RBP9.33□□□□□ -0.92
RABGGTA-213ENST00000560127 IGLV11-55A0A075B6I3 123 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 OR4C46A6NHA9 309 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 ZNF735P0CB33 412 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 ZNF182P17025 639 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 NAT1P18440 290 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 ADMP35318 185 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 RPL27AP46776 148 aaKnown RBP9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 RORCP51449 518 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 TMBIM6P55061 237 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 LAMTOR1Q6IAA8 161 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 CNIH2Q6PI25 160 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 POM121L12Q8N7R1 296 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 GPX8Q8TED1 209 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 RAB2BQ8WUD1 216 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 TMEM190Q8WZ59 177 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 S100A16Q96FQ6 103 aaKnown RBP9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 HRH4Q9H3N8 390 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 DIABLOQ9NR28 239 aa9.32□□□□□ -0.92
RABGGTA-213ENST00000560127 J3QRK9 145 aa9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 CTDSP2O14595 271 aa9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 CTSDP07339 412 aaPredicted RBP9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 RPA2P15927 270 aa9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 HIST1H1BP16401 226 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 BRWD1-AS2P59051 145 aa9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 RPL30P62888 115 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 LGALS9BQ3B8N2 356 aa9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 PLET1Q6UQ28 207 aa9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 VKORC1L1Q8N0U8 176 aa9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 ZNF502Q8TBZ5 544 aa9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 CXorf58Q96LI9 332 aa9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 CMTM3Q96MX0 182 aa9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 GPHA2Q96T91 129 aa9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 BCL7BQ9BQE9 202 aa9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 GINS4Q9BRT9 223 aa9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 SLIRPQ9GZT3 109 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-213ENST00000560127 OR2W1Q9Y3N9 320 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms