RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 HNRNPCP07910 306 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMAD6-204ENST00000559931 FGF2P09038 288 aa11.29□□□□□ -0.6
SMAD6-204ENST00000559931 EGR2P11161 476 aaPredicted RBP11.29□□□□□ -0.6
SMAD6-204ENST00000559931 SSBP2P81877 361 aaPredicted RBP11.29□□□□□ -0.6
SMAD6-204ENST00000559931 IAH1Q2TAA2 248 aaPredicted RBP11.29□□□□□ -0.6
SMAD6-204ENST00000559931 SPINK9Q5DT21 86 aa11.29□□□□□ -0.6
SMAD6-204ENST00000559931 GSG1LQ6UXU4 331 aa11.29□□□□□ -0.6
SMAD6-204ENST00000559931 ZNF429Q86V71 674 aa11.29□□□□□ -0.6
SMAD6-204ENST00000559931 OR5T1Q8NG75 326 aa11.29□□□□□ -0.6
SMAD6-204ENST00000559931 MED28Q9H204 178 aa11.29□□□□□ -0.6
SMAD6-204ENST00000559931 ZNF355PQ9NSJ1 428 aa11.29□□□□□ -0.6
SMAD6-204ENST00000559931 CACFD1Q9UGQ2 172 aa11.29□□□□□ -0.6
SMAD6-204ENST00000559931 ZNF257Q9Y2Q1 563 aa11.29□□□□□ -0.6
SMAD6-204ENST00000559931 C7orf66A4D0T2 115 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 CEBPZOSA8MTT3 80 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 MPTX1A8MV57 137 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 E7EUB6 86 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 GOSR2O14653 212 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 SLC25A6P12236 298 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 SPCS3P61009 180 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 AKIRIN2Q53H80 203 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 ZNF329Q86UD4 541 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 MRPL41Q8IXM3 137 aaKnown RBP11.28□□□□□ -0.6
SMAD6-204ENST00000559931 KLHDC1Q8N7A1 406 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 OR10W1Q8NGF6 305 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 TMEM68Q96MH6 324 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 PLEKHA3Q9HB20 300 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 NDUFA4L2Q9NRX3 87 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 COA4Q9NYJ1 87 aa11.28□□□□□ -0.6
SMAD6-204ENST00000559931 A0A1W2PN81 502 aa11.27□□□□□ -0.61
SMAD6-204ENST00000559931 SCGB1D2O95969 90 aa11.27□□□□□ -0.61
SMAD6-204ENST00000559931 REG1AP05451 166 aa11.27□□□□□ -0.61
SMAD6-204ENST00000559931 OR13C7P0DN81 318 aa11.27□□□□□ -0.61
SMAD6-204ENST00000559931 CHRNA7P36544 502 aa11.27□□□□□ -0.61
SMAD6-204ENST00000559931 HOXA1P49639 335 aaPredicted RBP11.27□□□□□ -0.61
SMAD6-204ENST00000559931 TMEM65Q6PI78 240 aa11.27□□□□□ -0.61
SMAD6-204ENST00000559931 OR5AU1Q8NGC0 362 aa11.27□□□□□ -0.61
SMAD6-204ENST00000559931 OR10C1Q96KK4 312 aa11.27□□□□□ -0.61
SMAD6-204ENST00000559931 MGAT4CQ9UBM8 478 aa11.27□□□□□ -0.61
SMAD6-204ENST00000559931 A0A1B0GW64 132 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 CGB1A6NKQ9 187 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 TEX22C9J3V5 150 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 WRBO00258 174 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 SIX6O95475 246 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 PF4V1P10720 104 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 DEFA4P12838 97 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 AREGP15514 252 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 ERHP84090 104 aaKnown RBP11.26□□□□□ -0.61
SMAD6-204ENST00000559931 PRCDQ00LT1 54 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 C2orf68Q2NKX9 166 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 AWAT1Q58HT5 328 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 CXorf66Q5JRM2 361 aaPredicted RBP11.26□□□□□ -0.61
SMAD6-204ENST00000559931 HSD17B13Q7Z5P4 300 aaPredicted RBP11.26□□□□□ -0.61
SMAD6-204ENST00000559931 ZBTB8BQ8NAP8 495 aaPredicted RBP11.26□□□□□ -0.61
SMAD6-204ENST00000559931 OR52E5Q8NH55 327 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 C2orf50Q96LR7 162 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 SRSF8Q9BRL6 282 aaKnown RBP11.26□□□□□ -0.61
SMAD6-204ENST00000559931 WNT10AQ9GZT5 417 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 HEYLQ9NQ87 328 aaPredicted RBP11.26□□□□□ -0.61
SMAD6-204ENST00000559931 ZNF580Q9UK33 172 aa11.26□□□□□ -0.61
SMAD6-204ENST00000559931 STAB1Q9NY15 2570 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 PITX3O75364 302 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 MED6O75586 246 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 PSMB6P28072 239 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 SNCAP37840 140 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 NKX2-1P43699 371 aaPredicted RBP11.25□□□□□ -0.61
SMAD6-204ENST00000559931 CRIP2P52943 208 aaPredicted RBP11.25□□□□□ -0.61
SMAD6-204ENST00000559931 PROK1P58294 105 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 TNFRSF9Q07011 255 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 ASPHD1Q5U4P2 390 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 TEX38Q6PEX7 206 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 C10orf99Q6UWK7 81 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 C12orf54Q6X4T0 127 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 TTC9CQ8N5M4 171 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 OR4X2Q8NGF9 303 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 OR5M8Q8NGP6 311 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 MS4A10Q96PG2 267 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 MAGT1Q9H0U3 335 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 HIPK2Q9H2X6 1198 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 RBKSQ9H477 322 aa11.25□□□□□ -0.61
SMAD6-204ENST00000559931 IGLC7A0M8Q6 106 aa11.24□□□□□ -0.61
SMAD6-204ENST00000559931 FAM90A26D6RGX4 464 aa11.24□□□□□ -0.61
SMAD6-204ENST00000559931 AARDQ4LEZ3 155 aa11.24□□□□□ -0.61
SMAD6-204ENST00000559931 COMMD1Q8N668 190 aa11.24□□□□□ -0.61
SMAD6-204ENST00000559931 C11orf44Q8N8P7 122 aa11.24□□□□□ -0.61
SMAD6-204ENST00000559931 FAM110DQ8TAY7 271 aaPredicted RBP11.24□□□□□ -0.61
SMAD6-204ENST00000559931 HSPB7Q9UBY9 170 aa11.24□□□□□ -0.61
SMAD6-204ENST00000559931 NPIPB5A8MRT5 1133 aa11.23□□□□□ -0.61
SMAD6-204ENST00000559931 CYB5BO43169 146 aa11.23□□□□□ -0.61
SMAD6-204ENST00000559931 SYNGR2O43760 224 aa11.23□□□□□ -0.61
SMAD6-204ENST00000559931 PRH1P02810 166 aa11.23□□□□□ -0.61
SMAD6-204ENST00000559931 TRGV3P03979 118 aa11.23□□□□□ -0.61
SMAD6-204ENST00000559931 PPIFP30405 207 aaKnown RBP11.23□□□□□ -0.61
SMAD6-204ENST00000559931 SUB1P53999 127 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMAD6-204ENST00000559931 CYCSP99999 105 aaKnown RBP11.23□□□□□ -0.61
SMAD6-204ENST00000559931 WT1-ASQ06250 92 aa11.23□□□□□ -0.61
SMAD6-204ENST00000559931 FCN2Q15485 313 aa11.23□□□□□ -0.61
SMAD6-204ENST00000559931 C19orf54Q5BKX5 351 aa11.23□□□□□ -0.61
SMAD6-204ENST00000559931 KHDC1LQ5JSQ8 128 aa11.23□□□□□ -0.61
SMAD6-204ENST00000559931 SLC25A24Q6NUK1 477 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms