RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 RBMY1EA6NEQ0 496 aaKnown RBP9.22□□□□□ -0.93
SPG11-219ENST00000559822 TGOLN2O43493 480 aa9.22□□□□□ -0.93
SPG11-219ENST00000559822 SNAPC5O75971 98 aa9.22□□□□□ -0.93
SPG11-219ENST00000559822 RLN1P04808 185 aa9.22□□□□□ -0.93
SPG11-219ENST00000559822 RBMY1DP0C7P1 496 aaKnown RBP9.22□□□□□ -0.93
SPG11-219ENST00000559822 PRSS3P35030 304 aa9.22□□□□□ -0.93
SPG11-219ENST00000559822 TAS2R20P59543 309 aa9.22□□□□□ -0.93
SPG11-219ENST00000559822 RBPMS2Q6ZRY4 209 aaKnown RBP9.22□□□□□ -0.93
SPG11-219ENST00000559822 OR1L6Q8NGR2 347 aa9.22□□□□□ -0.93
SPG11-219ENST00000559822 OR6F1Q8NGZ6 308 aa9.22□□□□□ -0.93
SPG11-219ENST00000559822 LSM10Q969L4 123 aaKnown RBP9.22□□□□□ -0.93
SPG11-219ENST00000559822 ATP6V0BQ99437 205 aa9.22□□□□□ -0.93
SPG11-219ENST00000559822 RETNQ9HD89 108 aa9.22□□□□□ -0.93
SPG11-219ENST00000559822 MLXQ9UH92 298 aa9.22□□□□□ -0.93
SPG11-219ENST00000559822 ANAPC10Q9UM13 185 aa9.22□□□□□ -0.93
SPG11-219ENST00000559822 DNAH7Q8WXX0 4024 aa9.22□□□□□ -0.93
SPG11-219ENST00000559822 TENM2Q9NT68 2774 aa9.22□□□□□ -0.93
SPG11-219ENST00000559822 A0A087WXM4 84 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 GPR31O00270 319 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 JTBO76095 146 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 PMP2P02689 132 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 SERPINE2P07093 398 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 C8orf88P0DMB2 117 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 OR13C7P0DN81 318 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 NAT1P18440 290 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 EDN2P20800 178 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 RFX2P48378 723 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 TM4SF20Q53R12 229 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 LPCAT3Q6P1A2 487 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 SPSB3Q6PJ21 355 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 BTNL8Q6UX41 500 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 SLC38A6Q8IZM9 456 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 DGCR14Q96DF8 476 aaKnown RBP9.21□□□□□ -0.94
SPG11-219ENST00000559822 BSCL2Q96G97 398 aaPredicted RBP9.21□□□□□ -0.94
SPG11-219ENST00000559822 TSC22D3Q99576 134 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 FAM110AQ9BQ89 295 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 GGTLC1Q9BX51 225 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 HINT2Q9BX68 163 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 WFDC10AQ9H1F0 79 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 FKBP11Q9NYL4 201 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 PRNDQ9UKY0 176 aa9.21□□□□□ -0.94
SPG11-219ENST00000559822 LOC102724200A0A096LPH7 203 aaPredicted RBP9.2□□□□□ -0.94
SPG11-219ENST00000559822 TEX50A0A1B0GTY4 177 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 SMIM31A0A1B0GVY4 71 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 PGLYRP1O75594 196 aaPredicted RBP9.2□□□□□ -0.94
SPG11-219ENST00000559822 SCAF4O95104 1147 aaKnown RBP9.2□□□□□ -0.94
SPG11-219ENST00000559822 TNFAIP8O95379 198 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 RPA2P15927 270 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 RPS19P39019 145 aaKnown RBP9.2□□□□□ -0.94
SPG11-219ENST00000559822 LPAR6P43657 344 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 ZNF585BQ52M93 769 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 LAMTOR1Q6IAA8 161 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 SLC25A24Q6NUK1 477 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 UNQ9165/PRO28630Q6UXU0 137 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 OR10W1Q8NGF6 305 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 OR5B3Q8NH48 314 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 TMEM190Q8WZ59 177 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 TMEM56Q96MV1 263 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 CMTM3Q96MX0 182 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 SPAG8Q99932 426 aaPredicted RBP9.2□□□□□ -0.94
SPG11-219ENST00000559822 ZNF436Q9C0F3 470 aaPredicted RBP9.2□□□□□ -0.94
SPG11-219ENST00000559822 C5orf66Q9H5L9 145 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 DAZ1Q9NQZ3 744 aaKnown RBP9.2□□□□□ -0.94
SPG11-219ENST00000559822 NDUFA4L2Q9NRX3 87 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 FAM212BQ9NTI7 297 aaPredicted RBP9.2□□□□□ -0.94
SPG11-219ENST00000559822 GAR1Q9NY12 217 aaKnown RBP9.2□□□□□ -0.94
SPG11-219ENST00000559822 OR51B2Q9Y5P1 312 aa9.2□□□□□ -0.94
SPG11-219ENST00000559822 F11RQ9Y624 299 aaKnown RBP9.2□□□□□ -0.94
SPG11-219ENST00000559822 DYNC2H1Q8NCM8 4307 aaKnown RBP9.19□□□□□ -0.94
SPG11-219ENST00000559822 OR2T8A6NH00 312 aa9.19□□□□□ -0.94
SPG11-219ENST00000559822 NDUFA4O00483 81 aa9.19□□□□□ -0.94
SPG11-219ENST00000559822 KRASP01116 189 aa9.19□□□□□ -0.94
SPG11-219ENST00000559822 HRH1P35367 487 aa9.19□□□□□ -0.94
SPG11-219ENST00000559822 TGFBR1P36897 503 aa9.19□□□□□ -0.94
SPG11-219ENST00000559822 TSPAN5P62079 268 aa9.19□□□□□ -0.94
SPG11-219ENST00000559822 LSM3P62310 102 aaKnown RBP9.19□□□□□ -0.94
SPG11-219ENST00000559822 WT1-ASQ06250 92 aa9.19□□□□□ -0.94
SPG11-219ENST00000559822 FCAMRQ8WWV6 532 aa9.19□□□□□ -0.94
SPG11-219ENST00000559822 SLC25A46Q96AG3 418 aa9.19□□□□□ -0.94
SPG11-219ENST00000559822 YIPF6Q96EC8 236 aa9.19□□□□□ -0.94
SPG11-219ENST00000559822 FXYD6Q9H0Q3 95 aa9.19□□□□□ -0.94
SPG11-219ENST00000559822 SCPEP1Q9HB40 452 aa9.19□□□□□ -0.94
SPG11-219ENST00000559822 C21orf62Q9NYP8 219 aa9.19□□□□□ -0.94
SPG11-219ENST00000559822 IGHV3-35A0A0C4DH35 117 aa9.18□□□□□ -0.94
SPG11-219ENST00000559822 APOA1P02647 267 aa9.18□□□□□ -0.94
SPG11-219ENST00000559822 HLA-DMAP28067 261 aa9.18□□□□□ -0.94
SPG11-219ENST00000559822 G6PCP35575 357 aa9.18□□□□□ -0.94
SPG11-219ENST00000559822 OR2C3Q8N628 320 aa9.18□□□□□ -0.94
SPG11-219ENST00000559822 GPX8Q8TED1 209 aa9.18□□□□□ -0.94
SPG11-219ENST00000559822 C15orf61A6NNL5 157 aa9.17□□□□□ -0.94
SPG11-219ENST00000559822 TSPAN4O14817 238 aa9.17□□□□□ -0.94
SPG11-219ENST00000559822 RCVRNP35243 200 aa9.17□□□□□ -0.94
SPG11-219ENST00000559822 APOC4P55056 127 aa9.17□□□□□ -0.94
SPG11-219ENST00000559822 PHLDA2Q53GA4 152 aa9.17□□□□□ -0.94
SPG11-219ENST00000559822 Q56UQ5 140 aa9.17□□□□□ -0.94
SPG11-219ENST00000559822 UBAC2Q8NBM4 344 aa9.17□□□□□ -0.94
SPG11-219ENST00000559822 SCARB1Q8WTV0 552 aa9.17□□□□□ -0.94
SPG11-219ENST00000559822 TMEM14BQ9NUH8 114 aa9.17□□□□□ -0.94
SPG11-219ENST00000559822 COMMD3Q9UBI1 195 aa9.17□□□□□ -0.94
SPG11-219ENST00000559822 NSG2Q9Y328 171 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms