RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 SMIM4Q8WVI0 70 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 ISOC1Q96CN7 298 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 ZNF486Q96H40 463 aaPredicted RBP8.34□□□□□ -1.07
SPG11-216ENST00000559347 SMAD5-AS1Q9Y6J3 95 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 S4R3C0 116 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 STAB2Q8WWQ8 2551 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 TEX50A0A1B0GTY4 177 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 C15orf61A6NNL5 157 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 IGHV3-23P01764 117 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 IFNA6P05013 189 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 CSN3P07498 182 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 DEFA4P12838 97 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 PTBP1P26599 531 aaKnown RBP eCLIP8.33□□□□□ -1.08
SPG11-216ENST00000559347 TAS2R19P59542 299 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 WT1-ASQ06250 92 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 HSD17B13Q7Z5P4 300 aaPredicted RBP8.33□□□□□ -1.08
SPG11-216ENST00000559347 GDPD1Q8N9F7 314 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 TMEM229BQ8NBD8 167 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 OR1L8Q8NGR8 309 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 EEF1AKMT3Q96AZ1 226 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 SEC22AQ96IW7 307 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 SLIRPQ9GZT3 109 aaKnown RBP8.33□□□□□ -1.08
SPG11-216ENST00000559347 NDUFA4L2Q9NRX3 87 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 SIGLEC8Q9NYZ4 499 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 PEMTQ9UBM1 199 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 NSG2Q9Y328 171 aa8.33□□□□□ -1.08
SPG11-216ENST00000559347 TENM3Q9P273 2699 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 DBX1A6NMT0 343 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 H0Y980 276 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 CTDSPLO15194 276 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 GGCTO75223 188 aaKnown RBP8.32□□□□□ -1.08
SPG11-216ENST00000559347 HLA-AP01891 365 aaKnown RBP8.32□□□□□ -1.08
SPG11-216ENST00000559347 SERPINE2P07093 398 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 TRAPPC2P0DI81 140 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 TRAPPC2BP0DI82 140 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 PGAM2P15259 253 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 PI3P19957 117 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 ARL3P36405 182 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 IL18Q14116 193 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 TATDN3Q17R31 274 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 FAAP20Q6NZ36 180 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 STEAP1BQ6NZ63 245 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 CLEC19AQ6UXS0 136 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 OR5B3Q8NH48 314 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 LSM10Q969L4 123 aaKnown RBP8.32□□□□□ -1.08
SPG11-216ENST00000559347 MRGPRFQ96AM1 343 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 CXorf58Q96LI9 332 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 TSC22D3Q99576 134 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 C6orf62Q9GZU0 229 aaPredicted RBP8.32□□□□□ -1.08
SPG11-216ENST00000559347 TMEM14BQ9NUH8 114 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 PRNDQ9UKY0 176 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 OR51B2Q9Y5P1 312 aa8.32□□□□□ -1.08
SPG11-216ENST00000559347 TRBV7-1A0A0A6YYK4 115 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 A8MWP6 167 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 LGALS9O00182 355 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 SNAPC5O75971 98 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 RAB3DO95716 219 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 OR13C7P0DN81 318 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 EDN2P20800 178 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 PIGPP57054 158 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 SCGB2B2Q4G0G5 96 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 LCN12Q6JVE5 192 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 ADAMTSL5Q6ZMM2 481 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 Q8N402 240 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 ZNF502Q8TBZ5 544 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 DIRAS2Q96HU8 199 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 TP53RKQ96S44 253 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 THAP7Q9BT49 309 aaPredicted RBP8.31□□□□□ -1.08
SPG11-216ENST00000559347 HINT2Q9BX68 163 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 THYN1Q9P016 225 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 RABL2AQ9UBK7 228 aaPredicted RBP8.31□□□□□ -1.08
SPG11-216ENST00000559347 RABL2BQ9UNT1 228 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 F11RQ9Y624 299 aaKnown RBP8.31□□□□□ -1.08
SPG11-216ENST00000559347 CEPT1Q9Y6K0 416 aa8.31□□□□□ -1.08
SPG11-216ENST00000559347 IZUMO1RA6ND01 250 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 C2orf70A6NJV1 201 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 CYB5BO43169 146 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 OR2C1O95371 312 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 FRMD6-AS1P0C7T7 363 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 NHLRC4P0CG21 123 aaPredicted RBP8.3□□□□□ -1.08
SPG11-216ENST00000559347 GPR183P32249 361 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 MECP2P51608 486 aaKnown RBP8.3□□□□□ -1.08
SPG11-216ENST00000559347 MFAP2P55001 183 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 MEF2DQ14814 521 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 H2BFWTQ7Z2G1 175 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 GPHB5Q86YW7 130 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 Q8N1Y9 231 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 CCDC71LQ8N9Z2 235 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 OR4C16Q8NGL9 310 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 OR13C8Q8NGS7 320 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 OR2K2Q8NGT1 345 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 TERB2Q8NHR7 220 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 MARCH1Q8TCQ1 289 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 TMEM56Q96MV1 263 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 ASCL2Q99929 193 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 NXF2Q9GZY0 626 aaKnown RBP8.3□□□□□ -1.08
SPG11-216ENST00000559347 RBM38Q9H0Z9 239 aaKnown RBP8.3□□□□□ -1.08
SPG11-216ENST00000559347 FKBP11Q9NYL4 201 aa8.3□□□□□ -1.08
SPG11-216ENST00000559347 KMT2CQ8NEZ4 4911 aaKnown RBP8.29□□□□□ -1.08
SPG11-216ENST00000559347 C3orf85A0A1B0GTC6 90 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms