RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 FAM122AQ96E09 287 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 ASCL3Q9NQ33 180 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 OR51B2Q9Y5P1 312 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 TRGV10A0A0A0MS01 117 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 GRIFINA4D1Z8 144 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 C9JCJ5 164 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 CBLN1P23435 193 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 GLRXP35754 106 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 SSTP61278 116 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 ZNF90Q03938 601 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 RAB31Q13636 194 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 POU2AF1Q16633 256 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 ZNF474Q6S9Z5 364 aaPredicted RBP13.59□□□□□ -0.23
SPG11-215ENST00000559193 ZCCHC14Q8WYQ9 949 aaKnown RBP13.59□□□□□ -0.23
SPG11-215ENST00000559193 TP53TG3Q9ULZ0 132 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 MT-CO2P00403 227 aa13.58□□□□□ -0.24
SPG11-215ENST00000559193 GNG10P50151 68 aa13.58□□□□□ -0.24
SPG11-215ENST00000559193 SELENOTP62341 195 aa13.58□□□□□ -0.24
SPG11-215ENST00000559193 EAF1Q96JC9 268 aaPredicted RBP13.58□□□□□ -0.24
SPG11-215ENST00000559193 IGLV3-9A0A075B6K5 115 aa13.58□□□□□ -0.24
SPG11-215ENST00000559193 ACTL6BO94805 426 aa13.58□□□□□ -0.24
SPG11-215ENST00000559193 LBHQ53QV2 105 aaPredicted RBP13.58□□□□□ -0.24
SPG11-215ENST00000559193 MOB3BQ86TA1 216 aa13.58□□□□□ -0.24
SPG11-215ENST00000559193 UHRF2Q96PU4 802 aa13.58□□□□□ -0.24
SPG11-215ENST00000559193 DSCAMO60469 2012 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 SCGB1D1O95968 90 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 LINC00310P59036 64 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 TIMM23BQ5SRD1 257 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 STUMQ69YW2 141 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 ADTRPQ96IZ2 230 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 RAB9BQ9NP90 201 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 SLC45A2Q9UMX9 530 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 POLR3KQ9Y2Y1 108 aaPredicted RBP13.57□□□□□ -0.24
SPG11-215ENST00000559193 LY96Q9Y6Y9 160 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 TRAV9-1A0A075B6T8 112 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 FNDC10F2Z333 226 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 MMP23AO75900 390 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 AREGP15514 252 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 GATA4P43694 442 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 GAFA1Q96PS6 74 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 SFXN3Q9BWM7 321 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 PRNDQ9UKY0 176 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 TP53TG5Q9Y2B4 290 aa13.57□□□□□ -0.24
SPG11-215ENST00000559193 DSCAML1Q8TD84 2053 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 EREGO14944 169 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 LGALS4P56470 323 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 DEFB109BQ30KR1 87 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 RPRMLQ8N4K4 120 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 CMTM2Q8TAZ6 248 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 MS4A10Q96PG2 267 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 GCM1Q9NP62 436 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 RNF7Q9UBF6 113 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 SLC25A10Q9UBX3 287 aaPredicted RBP13.56□□□□□ -0.24
SPG11-215ENST00000559193 NAGKQ9UJ70 344 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 BDP1A6H8Y1 2624 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 CADP27708 2225 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 IGKV1OR2-108A0A075B7D4 117 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 J3QR06 171 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 FRMD6-AS1P0C7T7 363 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 PRCDQ00LT1 54 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 OR5I1Q13606 314 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 DEFB108BQ8NET1 73 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 NABP2Q9BQ15 211 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 LRFN3Q9BTN0 628 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 MRPL18Q9H0U6 180 aaKnown RBP13.56□□□□□ -0.24
SPG11-215ENST00000559193 PLEKHA3Q9HB20 300 aa13.56□□□□□ -0.24
SPG11-215ENST00000559193 SRRM4A7MD48 611 aaKnown RBP13.55□□□□□ -0.24
SPG11-215ENST00000559193 UPK2O00526 184 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 IGKV1-16P04430 117 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 PSG5Q15238 335 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 USF2Q15853 346 aaPredicted RBP13.55□□□□□ -0.24
SPG11-215ENST00000559193 PIP4P1Q86T03 277 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 FAM216BQ8N7L0 139 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 CORO2AQ92828 525 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 ZNF503Q96F45 646 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 ZNRD1Q9P1U0 126 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 V9GYV3 84 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 SPAARA0A1B0GVQ0 90 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 FTH1P19P0C7X4 201 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 CT45A6P0DMU7 189 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 CT45A5P0DMU8 189 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 CT45A7P0DMV0 189 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 KRTCAP3Q53RY4 240 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 CENPWQ5EE01 88 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 OR1L6Q8NGR2 347 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 CCL13Q99616 98 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 ZNF257Q9Y2Q1 563 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 ARL2-SNX15V9GYD0 113 aa13.55□□□□□ -0.24
SPG11-215ENST00000559193 KIR2DL5BA0A0G2JN68 375 aa13.54□□□□□ -0.24
SPG11-215ENST00000559193 KIR2DL5BA0A0G2JPC4 375 aa13.54□□□□□ -0.24
SPG11-215ENST00000559193 MMD2Q8IY49 270 aa13.54□□□□□ -0.24
SPG11-215ENST00000559193 KIR2DL5AQ8N109 375 aa13.54□□□□□ -0.24
SPG11-215ENST00000559193 DEFB124Q8NES8 71 aa13.54□□□□□ -0.24
SPG11-215ENST00000559193 SNRNP40Q96DI7 357 aaKnown RBP13.54□□□□□ -0.24
SPG11-215ENST00000559193 FAM215AQ9Y5M1 114 aa13.54□□□□□ -0.24
SPG11-215ENST00000559193 RAI1Q7Z5J4 1906 aaPredicted RBP13.54□□□□□ -0.24
SPG11-215ENST00000559193 A8MXE2 369 aa13.54□□□□□ -0.24
SPG11-215ENST00000559193 IGHV1-46P01743 117 aa13.54□□□□□ -0.24
SPG11-215ENST00000559193 FOSL1P15407 271 aa13.54□□□□□ -0.24
SPG11-215ENST00000559193 GATA2P23769 480 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms