RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 NDPQ00604 133 aa14.31□□□□□ -0.12
CLPX-203ENST00000558958 RNF126Q9BV68 326 aa14.31□□□□□ -0.12
CLPX-203ENST00000558958 HINT2Q9BX68 163 aa14.31□□□□□ -0.12
CLPX-203ENST00000558958 CUBNO60494 3623 aa14.3□□□□□ -0.12
CLPX-203ENST00000558958 SSSCA1O60232 199 aa14.3□□□□□ -0.12
CLPX-203ENST00000558958 RLN2P04090 185 aa14.3□□□□□ -0.12
CLPX-203ENST00000558958 PET100P0DJ07 73 aa14.3□□□□□ -0.12
CLPX-203ENST00000558958 DTD1Q8TEA8 209 aa14.3□□□□□ -0.12
CLPX-203ENST00000558958 ARPC1AQ92747 370 aa14.3□□□□□ -0.12
CLPX-203ENST00000558958 C11orf1Q9H5F2 150 aa14.3□□□□□ -0.12
CLPX-203ENST00000558958 OR5AC2Q9NZP5 309 aa14.3□□□□□ -0.12
CLPX-203ENST00000558958 TEX22C9J3V5 150 aa14.29□□□□□ -0.12
CLPX-203ENST00000558958 TMEM50AO95807 157 aa14.29□□□□□ -0.12
CLPX-203ENST00000558958 VDAC2P45880 294 aaPredicted RBP14.29□□□□□ -0.12
CLPX-203ENST00000558958 HOXA1P49639 335 aaPredicted RBP14.29□□□□□ -0.12
CLPX-203ENST00000558958 C11orf87Q6NUJ2 197 aa14.29□□□□□ -0.12
CLPX-203ENST00000558958 PRSS54Q6PEW0 395 aa14.29□□□□□ -0.12
CLPX-203ENST00000558958 OR10W1Q8NGF6 305 aa14.29□□□□□ -0.12
CLPX-203ENST00000558958 GRPEL2Q8TAA5 225 aa14.29□□□□□ -0.12
CLPX-203ENST00000558958 RAB40CQ96S21 281 aa14.29□□□□□ -0.12
CLPX-203ENST00000558958 PLEKHA3Q9HB20 300 aa14.29□□□□□ -0.12
CLPX-203ENST00000558958 MBD2Q9UBB5 411 aa14.29□□□□□ -0.12
CLPX-203ENST00000558958 A0A1W2PN81 502 aa14.28□□□□□ -0.12
CLPX-203ENST00000558958 MSGN1A6NI15 193 aa14.28□□□□□ -0.12
CLPX-203ENST00000558958 LINC01548A6NM66 108 aa14.28□□□□□ -0.12
CLPX-203ENST00000558958 INS-IGF2F8WCM5 200 aa14.28□□□□□ -0.12
CLPX-203ENST00000558958 IGHG2P01859 326 aa14.28□□□□□ -0.12
CLPX-203ENST00000558958 IAPPP10997 89 aa14.28□□□□□ -0.12
CLPX-203ENST00000558958 EGR2P11161 476 aaPredicted RBP14.28□□□□□ -0.12
CLPX-203ENST00000558958 LYL1P12980 280 aa14.28□□□□□ -0.12
CLPX-203ENST00000558958 CHRNA7P36544 502 aa14.28□□□□□ -0.12
CLPX-203ENST00000558958 PAX9P55771 341 aa14.28□□□□□ -0.12
CLPX-203ENST00000558958 C9orf152Q5JTZ5 239 aa14.28□□□□□ -0.12
CLPX-203ENST00000558958 THAP6Q8TBB0 222 aa14.28□□□□□ -0.12
CLPX-203ENST00000558958 CIB3Q96Q77 187 aaPredicted RBP14.28□□□□□ -0.12
CLPX-203ENST00000558958 ENY2Q9NPA8 101 aa14.28□□□□□ -0.12
CLPX-203ENST00000558958 FBXO7Q9Y3I1 522 aa14.28□□□□□ -0.12
CLPX-203ENST00000558958 IGLC7A0M8Q6 106 aa14.27□□□□□ -0.12
CLPX-203ENST00000558958 RNASE1P07998 156 aaKnown RBP14.27□□□□□ -0.12
CLPX-203ENST00000558958 SLC25A4P12235 298 aa14.27□□□□□ -0.12
CLPX-203ENST00000558958 PVALBP20472 110 aaPredicted RBP14.27□□□□□ -0.12
CLPX-203ENST00000558958 WT1-ASQ06250 92 aa14.27□□□□□ -0.12
CLPX-203ENST00000558958 Q6ZS46 218 aa14.27□□□□□ -0.12
CLPX-203ENST00000558958 SMIM8Q96KF7 97 aa14.27□□□□□ -0.12
CLPX-203ENST00000558958 JMJD8Q96S16 334 aa14.27□□□□□ -0.12
CLPX-203ENST00000558958 SRSF8Q9BRL6 282 aaKnown RBP14.27□□□□□ -0.12
CLPX-203ENST00000558958 FAM103A1Q9BTL3 118 aaKnown RBP14.27□□□□□ -0.12
CLPX-203ENST00000558958 NPFFR1Q9GZQ6 430 aa14.27□□□□□ -0.12
CLPX-203ENST00000558958 HEYLQ9NQ87 328 aaPredicted RBP14.27□□□□□ -0.12
CLPX-203ENST00000558958 WSB1Q9Y6I7 421 aa14.27□□□□□ -0.12
CLPX-203ENST00000558958 E5RGE8 158 aa14.26□□□□□ -0.13
CLPX-203ENST00000558958 ATP6V0E1O15342 81 aa14.26□□□□□ -0.13
CLPX-203ENST00000558958 KCNAB3O43448 404 aa14.26□□□□□ -0.13
CLPX-203ENST00000558958 LY86O95711 162 aa14.26□□□□□ -0.13
CLPX-203ENST00000558958 C1QBP02746 253 aa14.26□□□□□ -0.13
CLPX-203ENST00000558958 TAS2R30P59541 319 aa14.26□□□□□ -0.13
CLPX-203ENST00000558958 OR11H4Q8NGC9 324 aa14.26□□□□□ -0.13
CLPX-203ENST00000558958 ABHD5Q8WTS1 349 aa14.26□□□□□ -0.13
CLPX-203ENST00000558958 HIPK2Q9H2X6 1198 aa14.26□□□□□ -0.13
CLPX-203ENST00000558958 PARP11Q9NR21 331 aa14.26□□□□□ -0.13
CLPX-203ENST00000558958 FAM181BA6NEQ2 426 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 TRIM77I1YAP6 450 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 L7N2F9 121 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 APELAP0DMC3 54 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 OR13C7P0DN81 318 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 AREGP15514 252 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 UBA52P62987 128 aaKnown RBP14.25□□□□□ -0.13
CLPX-203ENST00000558958 VAMP2P63027 116 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 HSD17B13Q7Z5P4 300 aaPredicted RBP14.25□□□□□ -0.13
CLPX-203ENST00000558958 SLC35E3Q7Z769 313 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 MRPL41Q8IXM3 137 aaKnown RBP14.25□□□□□ -0.13
CLPX-203ENST00000558958 SGMS2Q8NHU3 365 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 TEP1Q99973 2627 aaKnown RBP14.25□□□□□ -0.13
CLPX-203ENST00000558958 PRSS22Q9GZN4 317 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 NF1P21359 2839 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 NIPBLQ6KC79 2804 aaeCLIP14.25□□□□□ -0.13
CLPX-203ENST00000558958 FXYD6-FXYD2A0A087WZ82 144 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 CRIP2P52943 208 aaPredicted RBP14.25□□□□□ -0.13
CLPX-203ENST00000558958 RPL23AP62750 156 aaKnown RBP14.25□□□□□ -0.13
CLPX-203ENST00000558958 ERHP84090 104 aaKnown RBP14.25□□□□□ -0.13
CLPX-203ENST00000558958 ASPHD1Q5U4P2 390 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 TMEM65Q6PI78 240 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 OR2C3Q8N628 320 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 DCUN1D4Q92564 292 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 ZNF702PQ9H963 129 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 PSENENQ9NZ42 101 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 U3KQ87 197 aa14.25□□□□□ -0.13
CLPX-203ENST00000558958 H3BP45 60 aa14.24□□□□□ -0.13
CLPX-203ENST00000558958 TCF21O43680 179 aa14.24□□□□□ -0.13
CLPX-203ENST00000558958 TSC22D2O75157 780 aa14.24□□□□□ -0.13
CLPX-203ENST00000558958 IGF1P05019 195 aa14.24□□□□□ -0.13
CLPX-203ENST00000558958 P2RY1P47900 373 aa14.24□□□□□ -0.13
CLPX-203ENST00000558958 RPL15P61313 204 aaKnown RBP14.24□□□□□ -0.13
CLPX-203ENST00000558958 ZFP69Q49AA0 526 aa14.24□□□□□ -0.13
CLPX-203ENST00000558958 ZNF546Q86UE3 836 aa14.24□□□□□ -0.13
CLPX-203ENST00000558958 LFNGQ8NES3 379 aa14.24□□□□□ -0.13
CLPX-203ENST00000558958 LYRM2Q9NU23 88 aaPredicted RBP14.24□□□□□ -0.13
CLPX-203ENST00000558958 REG1AP05451 166 aa14.23□□□□□ -0.13
CLPX-203ENST00000558958 HTR2BP41595 481 aa14.23□□□□□ -0.13
CLPX-203ENST00000558958 BSXQ3C1V8 233 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms