RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 TRBV6-6A0A0A6YYG2 114 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 IGHV3-21A0A0B4J1V1 117 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 SLC17A2O00624 439 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 CHEK1O14757 476 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 ARL6IP5O75915 188 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 DEFA4P12838 97 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 FABP5Q01469 135 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 FAM90A2PQ658T7 463 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 TRPT1Q86TN4 253 aaKnown RBP8.4□□□□□ -1.06
SMAD3-206ENST00000558739 FAM89BQ8N5H3 189 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 CXorf58Q96LI9 332 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 OR2A7Q96R45 310 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 RHPN1-AS1Q9BWJ2 59 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 KRTAP1-5Q9BYS1 174 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 Q9N2K0 584 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 SMPXQ9UHP9 88 aa8.4□□□□□ -1.06
SMAD3-206ENST00000558739 KNCNA6PVL3 124 aa8.39□□□□□ -1.07
SMAD3-206ENST00000558739 FOXI3A8MTJ6 420 aaPredicted RBP8.39□□□□□ -1.07
SMAD3-206ENST00000558739 BPNT1O95861 308 aa8.39□□□□□ -1.07
SMAD3-206ENST00000558739 HTN3P15516 51 aa8.39□□□□□ -1.07
SMAD3-206ENST00000558739 EMP1P54849 157 aa8.39□□□□□ -1.07
SMAD3-206ENST00000558739 HAMPP81172 84 aa8.39□□□□□ -1.07
SMAD3-206ENST00000558739 IGSF11Q5DX21 431 aa8.39□□□□□ -1.07
SMAD3-206ENST00000558739 UBE2UQ5VVX9 321 aa8.39□□□□□ -1.07
SMAD3-206ENST00000558739 TMEM88Q6PEY1 159 aa8.39□□□□□ -1.07
SMAD3-206ENST00000558739 MORN3Q6PF18 240 aaPredicted RBP8.39□□□□□ -1.07
SMAD3-206ENST00000558739 ZNRF2Q8NHG8 242 aa8.39□□□□□ -1.07
SMAD3-206ENST00000558739 OSR1Q8TAX0 266 aaPredicted RBP8.39□□□□□ -1.07
SMAD3-206ENST00000558739 TMEM59Q9BXS4 323 aa8.39□□□□□ -1.07
SMAD3-206ENST00000558739 LPAR5Q9H1C0 372 aa8.39□□□□□ -1.07
SMAD3-206ENST00000558739 NDUFB11Q9NX14 153 aa8.39□□□□□ -1.07
SMAD3-206ENST00000558739 PKHD1L1Q86WI1 4243 aa8.38□□□□□ -1.07
SMAD3-206ENST00000558739 IGHV7-4-1A0A0J9YVY3 117 aa8.38□□□□□ -1.07
SMAD3-206ENST00000558739 NDUFA4O00483 81 aa8.38□□□□□ -1.07
SMAD3-206ENST00000558739 BET1O15155 118 aa8.38□□□□□ -1.07
SMAD3-206ENST00000558739 CREBL2O60519 120 aaPredicted RBP8.38□□□□□ -1.07
SMAD3-206ENST00000558739 FCGR3BO75015 233 aa8.38□□□□□ -1.07
SMAD3-206ENST00000558739 KBTBD11O94819 623 aa8.38□□□□□ -1.07
SMAD3-206ENST00000558739 RRASP10301 218 aa8.38□□□□□ -1.07
SMAD3-206ENST00000558739 CALRP27797 417 aaKnown RBP8.38□□□□□ -1.07
SMAD3-206ENST00000558739 STHQ8IWL8 128 aa8.38□□□□□ -1.07
SMAD3-206ENST00000558739 SPARTQ8N0X7 666 aa8.38□□□□□ -1.07
SMAD3-206ENST00000558739 LILRB2Q8N423 598 aa8.38□□□□□ -1.07
SMAD3-206ENST00000558739 Q9H521 79 aa8.38□□□□□ -1.07
SMAD3-206ENST00000558739 TMEM14BQ9NUH8 114 aa8.38□□□□□ -1.07
SMAD3-206ENST00000558739 AK6Q9Y3D8 172 aaKnown RBP8.38□□□□□ -1.07
SMAD3-206ENST00000558739 TRAV1-2A0A0B4J238 106 aa8.37□□□□□ -1.07
SMAD3-206ENST00000558739 TRDV1A0A1B0GX56 115 aa8.37□□□□□ -1.07
SMAD3-206ENST00000558739 IGLC7A0M8Q6 106 aa8.37□□□□□ -1.07
SMAD3-206ENST00000558739 SOCS1O15524 211 aa8.37□□□□□ -1.07
SMAD3-206ENST00000558739 DHFRP00374 187 aa8.37□□□□□ -1.07
SMAD3-206ENST00000558739 HIST1H1BP16401 226 aaKnown RBP8.37□□□□□ -1.07
SMAD3-206ENST00000558739 PTBP1P26599 531 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMAD3-206ENST00000558739 RANBP1P43487 201 aa8.37□□□□□ -1.07
SMAD3-206ENST00000558739 PSMD7P51665 324 aa8.37□□□□□ -1.07
SMAD3-206ENST00000558739 RPL30P62888 115 aaKnown RBP8.37□□□□□ -1.07
SMAD3-206ENST00000558739 DLK1P80370 383 aa8.37□□□□□ -1.07
SMAD3-206ENST00000558739 DCUN1D5Q9BTE7 237 aa8.37□□□□□ -1.07
SMAD3-206ENST00000558739 OR51E2Q9H255 320 aa8.37□□□□□ -1.07
SMAD3-206ENST00000558739 MS4A6AQ9H2W1 248 aa8.37□□□□□ -1.07
SMAD3-206ENST00000558739 PLEKHJ1Q9NW61 149 aa8.37□□□□□ -1.07
SMAD3-206ENST00000558739 HSF4Q9ULV5 492 aa8.37□□□□□ -1.07
SMAD3-206ENST00000558739 V9GY05 133 aa8.37□□□□□ -1.07
SMAD3-206ENST00000558739 K7EMT4 169 aa8.36□□□□□ -1.07
SMAD3-206ENST00000558739 NUPL2O15504 423 aaKnown RBP8.36□□□□□ -1.07
SMAD3-206ENST00000558739 NPY1RP25929 384 aa8.36□□□□□ -1.07
SMAD3-206ENST00000558739 TMEM50BP56557 158 aa8.36□□□□□ -1.07
SMAD3-206ENST00000558739 P2RY14Q15391 338 aa8.36□□□□□ -1.07
SMAD3-206ENST00000558739 C2orf76Q3KRA6 126 aa8.36□□□□□ -1.07
SMAD3-206ENST00000558739 ZNF66Q6ZN08 573 aa8.36□□□□□ -1.07
SMAD3-206ENST00000558739 TCF24Q7RTU0 167 aa8.36□□□□□ -1.07
SMAD3-206ENST00000558739 PUSL1Q8N0Z8 303 aaKnown RBP8.36□□□□□ -1.07
SMAD3-206ENST00000558739 TMEM116Q8NCL8 245 aa8.36□□□□□ -1.07
SMAD3-206ENST00000558739 FCGR1BQ92637 280 aa8.36□□□□□ -1.07
SMAD3-206ENST00000558739 FAM3DQ96BQ1 224 aa8.36□□□□□ -1.07
SMAD3-206ENST00000558739 BSCL2Q96G97 398 aaPredicted RBP8.36□□□□□ -1.07
SMAD3-206ENST00000558739 URM1Q9BTM9 101 aaKnown RBP8.36□□□□□ -1.07
SMAD3-206ENST00000558739 RNF167Q9H6Y7 350 aa8.36□□□□□ -1.07
SMAD3-206ENST00000558739 PLGRKTQ9HBL7 147 aa8.36□□□□□ -1.07
SMAD3-206ENST00000558739 C12orf4Q9NQ89 552 aa8.36□□□□□ -1.07
SMAD3-206ENST00000558739 IGHV3-66A0A0C4DH42 116 aa8.35□□□□□ -1.07
SMAD3-206ENST00000558739 C15orf62A8K5M9 175 aa8.35□□□□□ -1.07
SMAD3-206ENST00000558739 TRDCB7Z8K6 153 aa8.35□□□□□ -1.07
SMAD3-206ENST00000558739 APOHP02749 345 aaPredicted RBP8.35□□□□□ -1.07
SMAD3-206ENST00000558739 FGF9P31371 208 aaPredicted RBP8.35□□□□□ -1.07
SMAD3-206ENST00000558739 CMC4P56277 68 aaPredicted RBP8.35□□□□□ -1.07
SMAD3-206ENST00000558739 PLA2G7Q13093 441 aa8.35□□□□□ -1.07
SMAD3-206ENST00000558739 RAB11BQ15907 218 aa8.35□□□□□ -1.07
SMAD3-206ENST00000558739 MFSD4AQ8N468 514 aa8.35□□□□□ -1.07
SMAD3-206ENST00000558739 UBAC2Q8NBM4 344 aa8.35□□□□□ -1.07
SMAD3-206ENST00000558739 TMEM167AQ8TBQ9 72 aa8.35□□□□□ -1.07
SMAD3-206ENST00000558739 MAFIPQ8WZ33 124 aa8.35□□□□□ -1.07
SMAD3-206ENST00000558739 ST8SIA2Q92186 375 aa8.35□□□□□ -1.07
SMAD3-206ENST00000558739 ZNF503Q96F45 646 aa8.35□□□□□ -1.07
SMAD3-206ENST00000558739 FAM210BQ96KR6 192 aa8.35□□□□□ -1.07
SMAD3-206ENST00000558739 C17orf77Q96MU5 243 aa8.35□□□□□ -1.07
SMAD3-206ENST00000558739 RIMS4Q9H426 269 aaPredicted RBP8.35□□□□□ -1.07
SMAD3-206ENST00000558739 RRP15Q9Y3B9 282 aaKnown RBP8.35□□□□□ -1.07
SMAD3-206ENST00000558739 TMED3Q9Y3Q3 217 aa8.35□□□□□ -1.07
SMAD3-206ENST00000558739 TMEM272A0A1B0GTI8 110 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms