RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 SRSF8Q9BRL6 282 aaKnown RBP8.63□□□□□ -1.03
CASC4-205ENST00000558735 SRD5A3Q9H8P0 318 aa8.63□□□□□ -1.03
CASC4-205ENST00000558735 TMEM140Q9NV12 185 aa8.63□□□□□ -1.03
CASC4-205ENST00000558735 EHFQ9NZC4 300 aa8.63□□□□□ -1.03
CASC4-205ENST00000558735 RYR1P21817 5038 aa8.63□□□□□ -1.03
CASC4-205ENST00000558735 IGHV3-35A0A0C4DH35 117 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 SERPINE2P07093 398 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 FGF2P09038 288 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 TRAPPC2P0DI81 140 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 TRAPPC2BP0DI82 140 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 OR13C7P0DN81 318 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 F2RP25116 425 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 LPAR6P43657 344 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 TAS2R20P59543 309 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 HERV-K104P61576 105 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 LSM3P62310 102 aaKnown RBP8.62□□□□□ -1.03
CASC4-205ENST00000558735 WT1-ASQ06250 92 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 UBE2NLQ5JXB2 153 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 SAMD12Q8N8I0 201 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 FCAMRQ8WWV6 532 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 MOB3AQ96BX8 217 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 ZNF2Q9BSG1 426 aaPredicted RBP8.62□□□□□ -1.03
CASC4-205ENST00000558735 QTRT1Q9BXR0 403 aaKnown RBP8.62□□□□□ -1.03
CASC4-205ENST00000558735 IFT46Q9NQC8 304 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 NDUFA4L2Q9NRX3 87 aa8.62□□□□□ -1.03
CASC4-205ENST00000558735 SCAF4O95104 1147 aaKnown RBP8.61□□□□□ -1.03
CASC4-205ENST00000558735 KRASP01116 189 aa8.61□□□□□ -1.03
CASC4-205ENST00000558735 GPR183P32249 361 aa8.61□□□□□ -1.03
CASC4-205ENST00000558735 PRSS3P35030 304 aa8.61□□□□□ -1.03
CASC4-205ENST00000558735 MFAP2P55001 183 aa8.61□□□□□ -1.03
CASC4-205ENST00000558735 SLC25A24Q6NUK1 477 aa8.61□□□□□ -1.03
CASC4-205ENST00000558735 PLET1Q6UQ28 207 aa8.61□□□□□ -1.03
CASC4-205ENST00000558735 CADM3Q8N126 398 aa8.61□□□□□ -1.03
CASC4-205ENST00000558735 OR1L8Q8NGR8 309 aa8.61□□□□□ -1.03
CASC4-205ENST00000558735 OR6F1Q8NGZ6 308 aa8.61□□□□□ -1.03
CASC4-205ENST00000558735 VN1R17PQ8TDU5 208 aa8.61□□□□□ -1.03
CASC4-205ENST00000558735 BORCS5Q969J3 196 aa8.61□□□□□ -1.03
CASC4-205ENST00000558735 DGCR14Q96DF8 476 aaKnown RBP8.61□□□□□ -1.03
CASC4-205ENST00000558735 COMMD9Q9P000 198 aa8.61□□□□□ -1.03
CASC4-205ENST00000558735 MRPL27Q9P0M9 148 aaKnown RBP8.61□□□□□ -1.03
CASC4-205ENST00000558735 NSG2Q9Y328 171 aa8.61□□□□□ -1.03
CASC4-205ENST00000558735 TRAV25A0A0B4J276 109 aa8.6□□□□□ -1.03
CASC4-205ENST00000558735 MARCH11A6NNE9 402 aa8.6□□□□□ -1.03
CASC4-205ENST00000558735 TGOLN2O43493 480 aa8.6□□□□□ -1.03
CASC4-205ENST00000558735 RLN1P04808 185 aa8.6□□□□□ -1.03
CASC4-205ENST00000558735 G6PCP35575 357 aa8.6□□□□□ -1.03
CASC4-205ENST00000558735 ELLP55199 621 aaPredicted RBP8.6□□□□□ -1.03
CASC4-205ENST00000558735 TMEM69Q5SWH9 247 aa8.6□□□□□ -1.03
CASC4-205ENST00000558735 BTNL8Q6UX41 500 aa8.6□□□□□ -1.03
CASC4-205ENST00000558735 SLC16A13Q7RTY0 426 aa8.6□□□□□ -1.03
CASC4-205ENST00000558735 GDPD1Q8N9F7 314 aa8.6□□□□□ -1.03
CASC4-205ENST00000558735 OR52B4Q8NGK2 314 aa8.6□□□□□ -1.03
CASC4-205ENST00000558735 OR5H2Q8NGV7 314 aa8.6□□□□□ -1.03
CASC4-205ENST00000558735 GPX8Q8TED1 209 aa8.6□□□□□ -1.03
CASC4-205ENST00000558735 MARC2Q969Z3 335 aa8.6□□□□□ -1.03
CASC4-205ENST00000558735 ZNF436Q9C0F3 470 aaPredicted RBP8.6□□□□□ -1.03
CASC4-205ENST00000558735 THYN1Q9P016 225 aa8.6□□□□□ -1.03
CASC4-205ENST00000558735 A0A087WXM4 84 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 IGHV3-21A0A0B4J1V1 117 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 DBX1A6NMT0 343 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 F8W735 103 aaPredicted RBP8.59□□□□□ -1.03
CASC4-205ENST00000558735 EIF4EP06730 217 aaKnown RBP8.59□□□□□ -1.03
CASC4-205ENST00000558735 HLA-DMAP28067 261 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 HRH1P35367 487 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 TAS2R46P59540 309 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 ERVK-16P61578 105 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 ANKRD55Q3KP44 614 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 THOC7Q6I9Y2 204 aaKnown RBP8.59□□□□□ -1.03
CASC4-205ENST00000558735 HSD17B13Q7Z5P4 300 aaPredicted RBP8.59□□□□□ -1.03
CASC4-205ENST00000558735 CMTM1Q8IZ96 169 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 TSPAN14Q8NG11 270 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 SCARB1Q8WTV0 552 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 SLC25A46Q96AG3 418 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 CHRDL1Q9BU40 450 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 HINT2Q9BX68 163 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 FXYD6Q9H0Q3 95 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 UFC1Q9Y3C8 167 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 OR51B2Q9Y5P1 312 aa8.59□□□□□ -1.03
CASC4-205ENST00000558735 F11RQ9Y624 299 aaKnown RBP8.59□□□□□ -1.03
CASC4-205ENST00000558735 OR2T8A6NH00 312 aa8.58□□□□□ -1.04
CASC4-205ENST00000558735 K7EIM0 57 aa8.58□□□□□ -1.04
CASC4-205ENST00000558735 GPR31O00270 319 aa8.58□□□□□ -1.04
CASC4-205ENST00000558735 SNAPC5O75971 98 aa8.58□□□□□ -1.04
CASC4-205ENST00000558735 ADMP35318 185 aa8.58□□□□□ -1.04
CASC4-205ENST00000558735 PHLDA2Q53GA4 152 aa8.58□□□□□ -1.04
CASC4-205ENST00000558735 RBPMS2Q6ZRY4 209 aaKnown RBP8.58□□□□□ -1.04
CASC4-205ENST00000558735 ZNF414Q96IQ9 312 aa8.58□□□□□ -1.04
CASC4-205ENST00000558735 OVOL2Q9BRP0 275 aa8.58□□□□□ -1.04
CASC4-205ENST00000558735 C5orf66Q9H5L9 145 aa8.58□□□□□ -1.04
CASC4-205ENST00000558735 COMMD3Q9UBI1 195 aa8.58□□□□□ -1.04
CASC4-205ENST00000558735 HECTD4Q9Y4D8 3996 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 DNAH10Q8IVF4 4471 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 LOC102724200A0A096LPH7 203 aaPredicted RBP8.57□□□□□ -1.04
CASC4-205ENST00000558735 CYB5BO43169 146 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 IGKV1-39P01597 117 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 APOA1P02647 267 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 IGKV1D-39P04432 117 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 CTSGP08311 255 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 NCS1P62166 190 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 SPSB3Q6PJ21 355 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms