RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 DHODHQ02127 395 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 ZNF79Q15937 498 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 TATDN3Q17R31 274 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 RPEL1Q2QD12 228 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 C15orf32Q32M92 178 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 C9orf66Q5T8R8 295 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 FOXB2Q5VYV0 432 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 THOC7Q6I9Y2 204 aaKnown RBP6.96□□□□□ -1.3
SPG11-207ENST00000558138 SLC35G3Q8N808 338 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 GDPD1Q8N9F7 314 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 EEF1AKMT3Q96AZ1 226 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 SOSTQ9BQB4 213 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 SRRQ9GZT4 340 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 PLEKHA3Q9HB20 300 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 AKIP1Q9NQ31 210 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 SLC2A8Q9NY64 477 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 THYN1Q9P016 225 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 PEF1Q9UBV8 284 aaKnown RBP6.96□□□□□ -1.3
SPG11-207ENST00000558138 ZMAT5Q9UDW3 170 aaKnown RBP6.96□□□□□ -1.3
SPG11-207ENST00000558138 MGAM2Q2M2H8 2515 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 TEX50A0A1B0GTY4 177 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 C15orf61A6NNL5 157 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 E7EUB6 86 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 LY86O95711 162 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 IGHV3-23P01764 117 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 FGF2P09038 288 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 ETV6P41212 452 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 HOXA1P49639 335 aaPredicted RBP6.95□□□□□ -1.3
SPG11-207ENST00000558138 KLF9Q13886 244 aaPredicted RBP6.95□□□□□ -1.3
SPG11-207ENST00000558138 KIAA0141Q14154 515 aaPredicted RBP6.95□□□□□ -1.3
SPG11-207ENST00000558138 SPINK9Q5DT21 86 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 TMEM268Q5VZI3 342 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 SLC25A24Q6NUK1 477 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 C19orf35Q6ZS72 473 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 HSD17B13Q7Z5P4 300 aaPredicted RBP6.95□□□□□ -1.3
SPG11-207ENST00000558138 NECAP1Q8NC96 275 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 WFDC9Q8NEX5 89 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 OR10W1Q8NGF6 305 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 OR5B3Q8NH48 314 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 DCUN1D4Q92564 292 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 TRIM63Q969Q1 353 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 SEC22AQ96IW7 307 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 SRSF8Q9BRL6 282 aaKnown RBP6.95□□□□□ -1.3
SPG11-207ENST00000558138 ELOVL1Q9BW60 279 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 C5orf66Q9H5L9 145 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 GPR132Q9UNW8 380 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 S4R3C0 116 aa6.95□□□□□ -1.3
SPG11-207ENST00000558138 NBEAL1Q6ZS30 2694 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 NAP1L6A6NFF2 107 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 CRYM-AS1A6NIL9 109 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 CTRB1P17538 263 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 VAMP1P23763 118 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 UCP1P25874 307 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 ERHP84090 104 aaKnown RBP6.94□□□□□ -1.3
SPG11-207ENST00000558138 ZNF45Q02386 682 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 FHL3Q13643 280 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 IZUMO4Q1ZYL8 232 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 BEAN1Q3B7T3 259 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 CTRB2Q6GPI1 263 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 MRAPQ8TCY5 172 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 DLX4Q92988 240 aaPredicted RBP6.94□□□□□ -1.3
SPG11-207ENST00000558138 RBPMSQ93062 196 aaKnown RBP6.94□□□□□ -1.3
SPG11-207ENST00000558138 MISP3Q96FF7 219 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 OR4C12Q96R67 309 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 RTBDNQ9BSG5 229 aaPredicted RBP6.94□□□□□ -1.3
SPG11-207ENST00000558138 TMEM222Q9H0R3 208 aa6.94□□□□□ -1.3
SPG11-207ENST00000558138 A0A1B0GW64 132 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 IGLC7A0M8Q6 106 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 NXPH3O95157 252 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 NDUFB8O95169 186 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 BRI3O95415 125 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 IGKV1-39P01597 117 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 IGKV1D-39P04432 117 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 CRYGCP07315 174 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 ARL3P36405 182 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 SNCAP37840 140 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 SRPXP78539 464 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 RBMS2Q15434 407 aaKnown RBP6.93□□□□□ -1.3
SPG11-207ENST00000558138 BAK1Q16611 211 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 CNPY1Q3B7I2 92 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 FAM209BQ5JX69 171 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 ZNF343Q6P1L6 599 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 CLEC19AQ6UXS0 136 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 REC114Q7Z4M0 266 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 FAM219AQ8IW50 185 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 CENPSQ8N2Z9 138 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 UBAC2Q8NBM4 344 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 OR1L6Q8NGR2 347 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 DEDD2Q8WXF8 326 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 CXorf58Q96LI9 332 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 SLC25A21Q9BQT8 299 aaPredicted RBP6.93□□□□□ -1.3
SPG11-207ENST00000558138 ZC4H2Q9NQZ6 224 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 NDUFA4L2Q9NRX3 87 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 TMEM14BQ9NUH8 114 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 PRR13Q9NZ81 148 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 TNCP24821 2201 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 PKD1L1Q8TDX9 2849 aa6.93□□□□□ -1.3
SPG11-207ENST00000558138 VWFP04275 2813 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 TRBV9A0A0B4J1U6 114 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 IGHV3-21A0A0B4J1V1 117 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms