RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 RIIAD1A6NNX1 92 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 ZNF705GA8MUZ8 300 aaPredicted RBP1.76□□□□□ -2.13
SPG11-206ENST00000558093 H3BQF6 201 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 H7BYZ3 331 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 I3L521 148 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 AIPO00170 330 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 FFAR1O14842 300 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 MYL12BO14950 172 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 SNAPC5O75971 98 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 NRASP01111 189 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 TRBV12-3P01733 135 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 CRYBA1P05813 215 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 HIST1H1BP16401 226 aaKnown RBP1.76□□□□□ -2.13
SPG11-206ENST00000558093 EVI2AP22794 236 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 CASP1P29466 404 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 PPP1CCP36873 323 aaKnown RBP1.76□□□□□ -2.13
SPG11-206ENST00000558093 RAB5CP51148 216 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 NCBP2P52298 156 aaKnown RBP eCLIP1.76□□□□□ -2.13
SPG11-206ENST00000558093 ZNF140P52738 457 aaPredicted RBP1.76□□□□□ -2.13
SPG11-206ENST00000558093 COPZ1P61923 177 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 RPS21P63220 83 aaKnown RBP1.76□□□□□ -2.13
SPG11-206ENST00000558093 FABP5Q01469 135 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 DHRS2Q13268 280 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 RBMY1FQ15415 496 aaKnown RBP1.76□□□□□ -2.13
SPG11-206ENST00000558093 MMDQ15546 238 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 Q499Y3 187 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 C6orf99Q4VX62 202 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 PABPC1L2AQ5JQF8 200 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 LYRM7Q5U5X0 104 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 Q5W150 140 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 GLIPR1L1Q6UWM5 242 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 SBSNQ6UWP8 590 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 FBXW12Q6X9E4 464 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 Q6ZRU5 148 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 CLEC20AQ6ZU45 233 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 LINC00173Q6ZV60 143 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 TCF23Q7RTU1 214 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 VN1R4Q7Z5H5 301 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 TCTE3Q8IZS6 198 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 C12orf45Q8N5I9 185 aaPredicted RBP1.76□□□□□ -2.13
SPG11-206ENST00000558093 LINC00337Q8N6G1 96 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 ZNF420Q8TAQ5 688 aaPredicted RBP1.76□□□□□ -2.13
SPG11-206ENST00000558093 SLC25A40Q8TBP6 338 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 ADAT3Q96EY9 351 aaPredicted RBP1.76□□□□□ -2.13
SPG11-206ENST00000558093 CARD19Q96LW7 228 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 IGF2BP2-AS1Q96M15 143 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 NAA38Q9BRA0 125 aaKnown RBP1.76□□□□□ -2.13
SPG11-206ENST00000558093 PSMG3Q9BT73 122 aaPredicted RBP1.76□□□□□ -2.13
SPG11-206ENST00000558093 PBOV1Q9GZY1 135 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 GTSF1LQ9H1H1 148 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 PARP11Q9NR21 331 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 HEBP1Q9NRV9 189 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 SCN3BQ9NY72 215 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 TRMT112Q9UI30 125 aaKnown RBP1.76□□□□□ -2.13
SPG11-206ENST00000558093 RPUSD1Q9UJJ7 312 aaKnown RBP1.76□□□□□ -2.13
SPG11-206ENST00000558093 SCP2D1Q9UJQ7 156 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 CYSLTR1Q9Y271 337 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 HS3ST2Q9Y278 367 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 ENPP4Q9Y6X5 453 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 EML6Q6ZMW3 1958 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 ARHGAP35Q9NRY4 1499 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 OVOS2A0A0G2JMS6 1433 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 N4BP2Q86UW6 1770 aaPredicted RBP1.75□□□□□ -2.13
SPG11-206ENST00000558093 TRAV5A0A0B4J249 113 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 TRAV38-1A0A0B4J264 116 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 A0A0J9YXV3 536 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 LOC389332A0A1B0GUA5 103 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 A8MWP6 167 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 PIRO00625 290 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 RBFOX2O43251 390 aaKnown RBP eCLIP1.75□□□□□ -2.13
SPG11-206ENST00000558093 PGLYRP1O75594 196 aaPredicted RBP1.75□□□□□ -2.13
SPG11-206ENST00000558093 SLC25A14O95258 325 aaPredicted RBP1.75□□□□□ -2.13
SPG11-206ENST00000558093 IGHG2P01859 326 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 GYPCP04921 128 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 IGKV4-1P06312 121 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 LINC00694P0DN24 101 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 OR12D1P0DN82 309 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 GADD45AP24522 165 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 CXCL12P48061 93 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 MP68P56378 58 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 RBM11P57052 281 aaKnown RBP1.75□□□□□ -2.13
SPG11-206ENST00000558093 CDK6Q00534 326 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 PSG9Q00887 426 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 CAV1Q03135 178 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 ERCC8Q13216 396 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 COL5A1-AS1Q5SY13 56 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 FKBP1CQ5VVH2 108 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 NXNL2Q5VZ03 156 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 GLT8D1Q68CQ7 371 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 DNAJC24Q6P3W2 148 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 PRSS54Q6PEW0 395 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 ZNF493Q6ZR52 646 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 ZNF767PQ75MW2 155 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 PRNTQ86SH4 94 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 TMEM75Q8N9X5 138 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 OR51A4Q8NGJ6 313 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 OR2T27Q8NH04 317 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 RXFP4Q8TDU9 374 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 NAT14Q8WUY8 206 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 SLAMF6Q96DU3 332 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms