RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 TEX50A0A1B0GTY4 177 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 FAM240BA0A1B0GVZ2 78 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 TEX22C9J3V5 150 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 SOX15O60248 233 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 RBMXL2O75526 392 aaKnown RBP10.67□□□□□ -0.7
SHMT2-234ENST00000557703 RPLP1P05386 114 aaKnown RBP10.67□□□□□ -0.7
SHMT2-234ENST00000557703 CTRB1P17538 263 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 PSMB6P28072 239 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 BTCP35070 178 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 MYCNOSP40205 109 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 CCR6P51684 374 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 KIAA0141Q14154 515 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-234ENST00000557703 KHDC1LQ5JSQ8 128 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 ASPHD1Q5U4P2 390 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 TMEM268Q5VZI3 342 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 CTRB2Q6GPI1 263 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 C10orf99Q6UWK7 81 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 SELENOHQ8IZQ5 122 aaKnown RBP10.67□□□□□ -0.7
SHMT2-234ENST00000557703 NECAP1Q8NC96 275 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 RNASE11Q8TAA1 199 aaKnown RBP10.67□□□□□ -0.7
SHMT2-234ENST00000557703 PDCD10Q9BUL8 212 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 TMED3Q9Y3Q3 217 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 NOTCH3Q9UM47 2321 aa10.67□□□□□ -0.7
SHMT2-234ENST00000557703 PKD1L1Q8TDX9 2849 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 VWFP04275 2813 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 TRAV3A0A0B4J244 114 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 NUDT19A8MXV4 375 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 SFT2D2O95562 160 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 IGKV1-5P01602 117 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 TRGV3P03979 118 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 TCRBP04435 133 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 MECP2P51608 486 aaKnown RBP10.66□□□□□ -0.7
SHMT2-234ENST00000557703 PRCDQ00LT1 54 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 NSUN5P1Q3KNT7 163 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 PDLIM3Q53GG5 364 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-234ENST00000557703 TREML4Q6UXN2 200 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 WFDC9Q8NEX5 89 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 OR5T1Q8NG75 326 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 FYTTD1Q96QD9 318 aaKnown RBP10.66□□□□□ -0.7
SHMT2-234ENST00000557703 ATP6V0BQ99437 205 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 KLK15Q9H2R5 256 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 ZNF355PQ9NSJ1 428 aa10.66□□□□□ -0.7
SHMT2-234ENST00000557703 A0A0B4J293 547 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 A0A1B0GU03 582 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 C13orf42A0A1B0GVH6 325 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 LINC00854A0A1B0GVQ3 168 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 IGLC7A0M8Q6 106 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 DUS4LO95620 317 aaKnown RBP10.65□□□□□ -0.7
SHMT2-234ENST00000557703 LY86O95711 162 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 OR4E1P0C645 316 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 DEFA4P12838 97 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 VAMP1P23763 118 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 TPPP2P59282 170 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 SPCS3P61009 180 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 ERHP84090 104 aaKnown RBP10.65□□□□□ -0.7
SHMT2-234ENST00000557703 KLHL30-AS1Q8NEE0 82 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 DUSP18Q8NEJ0 188 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 COQ8AQ8NI60 647 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 PALMDQ9NP74 551 aa10.65□□□□□ -0.7
SHMT2-234ENST00000557703 E7EUB6 86 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 I3L521 148 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 HLA-AP01891 365 aaKnown RBP10.64□□□□□ -0.71
SHMT2-234ENST00000557703 PF4P02776 101 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 LGALS1P09382 135 aaKnown RBP10.64□□□□□ -0.71
SHMT2-234ENST00000557703 SULT1A3P0DMM9 295 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 SULT1A4P0DMN0 295 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 ATP5IP56385 69 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-234ENST00000557703 PPP1R1AQ13522 171 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 NMSQ5H8A3 153 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 C10orf55Q5SWW7 151 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 LYG2Q86SG7 212 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 SLC35G3Q8N808 338 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 ZNF114Q8NC26 417 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 LHFPL5Q8TAF8 219 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 CXorf58Q96LI9 332 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 GPR61Q9BZJ8 451 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 C20orf85Q9H1P6 137 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 TBC1D24Q9ULP9 559 aa10.64□□□□□ -0.71
SHMT2-234ENST00000557703 A0A1B0GW64 132 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 C9orf170A2RU37 121 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 HMX3A6NHT5 357 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 CGB1A6NKQ9 187 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 FAM90A26D6RGX4 464 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 CCL24O00175 119 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 IFNA17P01571 189 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 HSPB1P04792 205 aaKnown RBP10.63□□□□□ -0.71
SHMT2-234ENST00000557703 OR8U8P0C7N1 319 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 OR13C7P0DN81 318 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 SUB1P53999 127 aaKnown RBP eCLIP10.63□□□□□ -0.71
SHMT2-234ENST00000557703 ATP5G2Q06055 141 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 DHRS2Q13268 280 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 FHL3Q13643 280 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 SMCO1Q147U7 214 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 C4orf46Q504U0 113 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 ZNF343Q6P1L6 599 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 NOXA1Q86UR1 476 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 OR1P1Q8NH06 330 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 ENKURQ8TC29 256 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 P2RX4Q99571 388 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 MCRIP2Q9BUT9 160 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms