RNA–Protein interactions for RNA: ENST00000557657.5

TMEM260-216, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-216ENST00000557657 FABP4P15090 132 aa17.32■□□□□ 0.36
TMEM260-216ENST00000557657 TDGF1P3P51864 188 aa17.32■□□□□ 0.36
TMEM260-216ENST00000557657 LYPD2Q6UXB3 125 aa17.32■□□□□ 0.36
TMEM260-216ENST00000557657 YTHDF2Q9Y5A9 579 aaKnown RBP17.32■□□□□ 0.36
TMEM260-216ENST00000557657 SCO2A0A1W2PP80 73 aa17.32■□□□□ 0.36
TMEM260-216ENST00000557657 CTAG1AP78358 180 aa17.32■□□□□ 0.36
TMEM260-216ENST00000557657 NPVFQ9HCQ7 196 aa17.32■□□□□ 0.36
TMEM260-216ENST00000557657 SLC35D1Q9NTN3 355 aa17.32■□□□□ 0.36
TMEM260-216ENST00000557657 MKRN2OSH3BPM6 223 aa17.31■□□□□ 0.36
TMEM260-216ENST00000557657 S100A2P29034 98 aa17.31■□□□□ 0.36
TMEM260-216ENST00000557657 TMPRSS3P57727 454 aa17.31■□□□□ 0.36
TMEM260-216ENST00000557657 PRB3Q04118 309 aaPredicted RBP17.31■□□□□ 0.36
TMEM260-216ENST00000557657 SLC25A48Q6ZT89 311 aaKnown RBP17.31■□□□□ 0.36
TMEM260-216ENST00000557657 LINC01551Q86U37 167 aa17.31■□□□□ 0.36
TMEM260-216ENST00000557657 MRPL20Q9BYC9 149 aaKnown RBP17.31■□□□□ 0.36
TMEM260-216ENST00000557657 SLC25A10Q9UBX3 287 aaPredicted RBP17.31■□□□□ 0.36
TMEM260-216ENST00000557657 NAV3Q8IVL0 2385 aa17.31■□□□□ 0.36
TMEM260-216ENST00000557657 TRGV8A0A0C4DH27 118 aa17.31■□□□□ 0.36
TMEM260-216ENST00000557657 ZNF729A6NN14 1252 aaPredicted RBP17.31■□□□□ 0.36
TMEM260-216ENST00000557657 C17orf100A8MU93 164 aa17.31■□□□□ 0.36
TMEM260-216ENST00000557657 J3QR06 171 aa17.31■□□□□ 0.36
TMEM260-216ENST00000557657 PRRG2O14669 202 aa17.31■□□□□ 0.36
TMEM260-216ENST00000557657 STAG3L2P0CL84 134 aa17.3■□□□□ 0.36
TMEM260-216ENST00000557657 STAG3L3P0CL85 134 aa17.3■□□□□ 0.36
TMEM260-216ENST00000557657 S100PP25815 95 aa17.3■□□□□ 0.36
TMEM260-216ENST00000557657 DLX1P56177 255 aa17.3■□□□□ 0.36
TMEM260-216ENST00000557657 RPL31P62899 125 aaKnown RBP17.3■□□□□ 0.36
TMEM260-216ENST00000557657 EFNB3Q15768 340 aa17.3■□□□□ 0.36
TMEM260-216ENST00000557657 LRFN3Q9BTN0 628 aa17.3■□□□□ 0.36
TMEM260-216ENST00000557657 ENY2Q9NPA8 101 aa17.3■□□□□ 0.36
TMEM260-216ENST00000557657 IGKV1OR2-108A0A075B7D4 117 aa17.3■□□□□ 0.36
TMEM260-216ENST00000557657 ITGB1BP1O14713 200 aa17.3■□□□□ 0.36
TMEM260-216ENST00000557657 S100A12P80511 92 aa17.3■□□□□ 0.36
TMEM260-216ENST00000557657 TEX36Q5VZQ5 186 aa17.3■□□□□ 0.36
TMEM260-216ENST00000557657 GFRALQ6UXV0 394 aa17.3■□□□□ 0.36
TMEM260-216ENST00000557657 H1FXQ92522 213 aaKnown RBP17.3■□□□□ 0.36
TMEM260-216ENST00000557657 OR5B12Q96R08 314 aa17.3■□□□□ 0.36
TMEM260-216ENST00000557657 OR51M1Q9H341 326 aa17.3■□□□□ 0.36
TMEM260-216ENST00000557657 SVEP1Q4LDE5 3571 aa17.29■□□□□ 0.36
TMEM260-216ENST00000557657 E7EUB6 86 aa17.29■□□□□ 0.36
TMEM260-216ENST00000557657 MPDU1O75352 247 aa17.29■□□□□ 0.36
TMEM260-216ENST00000557657 SAA1P0DJI8 122 aaPredicted RBP17.29■□□□□ 0.36
TMEM260-216ENST00000557657 TEPPQ6URK8 271 aa17.29■□□□□ 0.36
TMEM260-216ENST00000557657 NUP37Q8NFH4 326 aa17.29■□□□□ 0.36
TMEM260-216ENST00000557657 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.29■□□□□ 0.36
TMEM260-216ENST00000557657 FAM216AQ8WUB2 273 aa17.29■□□□□ 0.36
TMEM260-216ENST00000557657 RAB1CQ92928 201 aa17.29■□□□□ 0.36
TMEM260-216ENST00000557657 TEX50A0A1B0GTY4 177 aa17.28■□□□□ 0.36
TMEM260-216ENST00000557657 HRASP01112 189 aa17.28■□□□□ 0.36
TMEM260-216ENST00000557657 FAM78BQ5VT40 261 aa17.28■□□□□ 0.36
TMEM260-216ENST00000557657 TMEM200BQ69YZ2 307 aa17.28■□□□□ 0.36
TMEM260-216ENST00000557657 MIR17HGQ75NE6 70 aa17.28■□□□□ 0.36
TMEM260-216ENST00000557657 PYGO2Q9BRQ0 406 aa17.28■□□□□ 0.36
TMEM260-216ENST00000557657 NCOR1P1Q9H4R4 102 aa17.28■□□□□ 0.36
TMEM260-216ENST00000557657 SRD5A3Q9H8P0 318 aa17.28■□□□□ 0.36
TMEM260-216ENST00000557657 SAP30LQ9HAJ7 183 aa17.28■□□□□ 0.36
TMEM260-216ENST00000557657 PTPRQQ9UMZ3 2332 aa17.28■□□□□ 0.36
TMEM260-216ENST00000557657 IGF2RP11717 2491 aa17.28■□□□□ 0.36
TMEM260-216ENST00000557657 CHRNB4P30926 498 aa17.28■□□□□ 0.36
TMEM260-216ENST00000557657 A0A0U1RQK1 487 aa17.27■□□□□ 0.36
TMEM260-216ENST00000557657 hADV38S2A0JD32 116 aa17.27■□□□□ 0.36
TMEM260-216ENST00000557657 UPK2O00526 184 aa17.27■□□□□ 0.36
TMEM260-216ENST00000557657 IGHV3-48P01763 117 aa17.27■□□□□ 0.36
TMEM260-216ENST00000557657 OR4P4Q8NGL7 312 aa17.27■□□□□ 0.36
TMEM260-216ENST00000557657 TMEM37Q8WXS4 190 aa17.27■□□□□ 0.36
TMEM260-216ENST00000557657 PLEKHA3Q9HB20 300 aa17.27■□□□□ 0.36
TMEM260-216ENST00000557657 TRAV20A0A0B4J274 112 aa17.27■□□□□ 0.35
TMEM260-216ENST00000557657 PPP5D1E7EU14 171 aa17.27■□□□□ 0.35
TMEM260-216ENST00000557657 CORO2AQ92828 525 aa17.27■□□□□ 0.35
TMEM260-216ENST00000557657 WFIKKN1Q96NZ8 548 aa17.26■□□□□ 0.35
TMEM260-216ENST00000557657 LINC00574Q9H8X3 128 aa17.26■□□□□ 0.35
TMEM260-216ENST00000557657 KCNIP2Q9NS61 270 aa17.26■□□□□ 0.35
TMEM260-216ENST00000557657 FUT9Q9Y231 359 aa17.26■□□□□ 0.35
TMEM260-216ENST00000557657 LINC00312Q9Y6C7 94 aa17.26■□□□□ 0.35
TMEM260-216ENST00000557657 ABCA4P78363 2273 aa17.26■□□□□ 0.35
TMEM260-216ENST00000557657 PDE6DO43924 150 aa17.26■□□□□ 0.35
TMEM260-216ENST00000557657 CXorf1O96002 111 aa17.26■□□□□ 0.35
TMEM260-216ENST00000557657 IGHV2-70P01814 119 aa17.26■□□□□ 0.35
TMEM260-216ENST00000557657 GCHFRP30047 84 aa17.26■□□□□ 0.35
TMEM260-216ENST00000557657 C10orf55Q5SWW7 151 aa17.26■□□□□ 0.35
TMEM260-216ENST00000557657 LINC00869P0C866 280 aa17.25■□□□□ 0.35
TMEM260-216ENST00000557657 TNFRSF1AP19438 455 aa17.25■□□□□ 0.35
TMEM260-216ENST00000557657 OR2T10Q8NGZ9 312 aa17.25■□□□□ 0.35
TMEM260-216ENST00000557657 OR9G1Q8NH87 305 aa17.25■□□□□ 0.35
TMEM260-216ENST00000557657 ADTRPQ96IZ2 230 aa17.25■□□□□ 0.35
TMEM260-216ENST00000557657 CTSZQ9UBR2 303 aa17.25■□□□□ 0.35
TMEM260-216ENST00000557657 ATRXP46100 2492 aa17.25■□□□□ 0.35
TMEM260-216ENST00000557657 PRCDQ00LT1 54 aa17.25■□□□□ 0.35
TMEM260-216ENST00000557657 RTL8BQ17RB0 113 aa17.25■□□□□ 0.35
TMEM260-216ENST00000557657 HIST1H2BLQ99880 126 aa17.25■□□□□ 0.35
TMEM260-216ENST00000557657 RAB9BQ9NP90 201 aa17.25■□□□□ 0.35
TMEM260-216ENST00000557657 ASH1LQ9NR48 2969 aaKnown RBP17.24■□□□□ 0.35
TMEM260-216ENST00000557657 NKX6-3A6NJ46 265 aa17.24■□□□□ 0.35
TMEM260-216ENST00000557657 FOXC1Q12948 553 aa17.24■□□□□ 0.35
TMEM260-216ENST00000557657 C9orf152Q5JTZ5 239 aa17.24■□□□□ 0.35
TMEM260-216ENST00000557657 HARBI1Q96MB7 349 aa17.24■□□□□ 0.35
TMEM260-216ENST00000557657 ZNF714Q96N38 554 aa17.24■□□□□ 0.35
TMEM260-216ENST00000557657 TMEM178BH3BS89 294 aa17.24■□□□□ 0.35
TMEM260-216ENST00000557657 POU2AF1Q16633 256 aa17.24■□□□□ 0.35
TMEM260-216ENST00000557657 OCC1Q8TAD7 63 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms