RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 H2BFWTQ7Z2G1 175 aa16.46■□□□□ 0.23
FOXA1-205ENST00000557418 FAM219AQ8IW50 185 aa16.46■□□□□ 0.23
FOXA1-205ENST00000557418 C12orf45Q8N5I9 185 aaPredicted RBP16.46■□□□□ 0.23
FOXA1-205ENST00000557418 GPR146Q96CH1 333 aa16.46■□□□□ 0.23
FOXA1-205ENST00000557418 PHB2Q99623 299 aa16.46■□□□□ 0.23
FOXA1-205ENST00000557418 GPR61Q9BZJ8 451 aa16.46■□□□□ 0.23
FOXA1-205ENST00000557418 ZNF580Q9UK33 172 aa16.46■□□□□ 0.23
FOXA1-205ENST00000557418 WSB1Q9Y6I7 421 aa16.46■□□□□ 0.23
FOXA1-205ENST00000557418 TNCP24821 2201 aa16.46■□□□□ 0.23
FOXA1-205ENST00000557418 CX3CL1P78423 397 aa16.45■□□□□ 0.22
FOXA1-205ENST00000557418 CFHR3Q02985 330 aa16.45■□□□□ 0.22
FOXA1-205ENST00000557418 ZNF562Q6V9R5 426 aa16.45■□□□□ 0.22
FOXA1-205ENST00000557418 MMD2Q8IY49 270 aa16.45■□□□□ 0.22
FOXA1-205ENST00000557418 RNF152Q8N8N0 203 aa16.45■□□□□ 0.22
FOXA1-205ENST00000557418 RRNAD1Q96FB5 475 aaKnown RBP16.45■□□□□ 0.22
FOXA1-205ENST00000557418 P2RX4Q99571 388 aa16.45■□□□□ 0.22
FOXA1-205ENST00000557418 OR51J1Q9H342 316 aa16.45■□□□□ 0.22
FOXA1-205ENST00000557418 NSG2Q9Y328 171 aa16.45■□□□□ 0.22
FOXA1-205ENST00000557418 ALG5Q9Y673 324 aa16.45■□□□□ 0.22
FOXA1-205ENST00000557418 PIGBOS1A0A0B4J2F0 54 aa16.44■□□□□ 0.22
FOXA1-205ENST00000557418 CCL24O00175 119 aa16.44■□□□□ 0.22
FOXA1-205ENST00000557418 CREBL2O60519 120 aaPredicted RBP16.44■□□□□ 0.22
FOXA1-205ENST00000557418 ADAP1O75689 374 aa16.44■□□□□ 0.22
FOXA1-205ENST00000557418 EGR2P11161 476 aaPredicted RBP16.44■□□□□ 0.22
FOXA1-205ENST00000557418 MYOD1P15172 320 aa16.44■□□□□ 0.22
FOXA1-205ENST00000557418 RPL8P62917 257 aaKnown RBP16.44■□□□□ 0.22
FOXA1-205ENST00000557418 MCRIP2Q9BUT9 160 aaKnown RBP16.44■□□□□ 0.22
FOXA1-205ENST00000557418 TMEM14BQ9NUH8 114 aa16.44■□□□□ 0.22
FOXA1-205ENST00000557418 TMED3Q9Y3Q3 217 aa16.44■□□□□ 0.22
FOXA1-205ENST00000557418 HOXB5P09067 269 aa16.43■□□□□ 0.22
FOXA1-205ENST00000557418 HLA-GP17693 338 aa16.43■□□□□ 0.22
FOXA1-205ENST00000557418 MAS1LP35410 378 aa16.43■□□□□ 0.22
FOXA1-205ENST00000557418 AARDQ4LEZ3 155 aa16.43■□□□□ 0.22
FOXA1-205ENST00000557418 C10orf55Q5SWW7 151 aa16.43■□□□□ 0.22
FOXA1-205ENST00000557418 GGNBP1Q5YKI7 109 aa16.43■□□□□ 0.22
FOXA1-205ENST00000557418 TMEM65Q6PI78 240 aa16.43■□□□□ 0.22
FOXA1-205ENST00000557418 DPF1Q92782 380 aa16.43■□□□□ 0.22
FOXA1-205ENST00000557418 RAX2Q96IS3 184 aa16.43■□□□□ 0.22
FOXA1-205ENST00000557418 DUX3Q96PT4 197 aa16.43■□□□□ 0.22
FOXA1-205ENST00000557418 PARP11Q9NR21 331 aa16.43■□□□□ 0.22
FOXA1-205ENST00000557418 FBXO7Q9Y3I1 522 aa16.43■□□□□ 0.22
FOXA1-205ENST00000557418 A0A1B0GW64 132 aa16.42■□□□□ 0.22
FOXA1-205ENST00000557418 CGB1A6NKQ9 187 aa16.42■□□□□ 0.22
FOXA1-205ENST00000557418 C15orf61A6NNL5 157 aa16.42■□□□□ 0.22
FOXA1-205ENST00000557418 E7EUB6 86 aa16.42■□□□□ 0.22
FOXA1-205ENST00000557418 G3V318 75 aa16.42■□□□□ 0.22
FOXA1-205ENST00000557418 ATP6V0E1O15342 81 aa16.42■□□□□ 0.22
FOXA1-205ENST00000557418 PSMB8P28062 276 aa16.42■□□□□ 0.22
FOXA1-205ENST00000557418 OR2B8PP59922 312 aa16.42■□□□□ 0.22
FOXA1-205ENST00000557418 FXYD3Q14802 87 aa16.42■□□□□ 0.22
FOXA1-205ENST00000557418 TNXAQ16473 311 aa16.42■□□□□ 0.22
FOXA1-205ENST00000557418 RNASE11Q8TAA1 199 aaKnown RBP16.42■□□□□ 0.22
FOXA1-205ENST00000557418 CACNG5Q9UF02 275 aa16.42■□□□□ 0.22
FOXA1-205ENST00000557418 PRNDQ9UKY0 176 aa16.42■□□□□ 0.22
FOXA1-205ENST00000557418 FOXA2Q9Y261 457 aaPredicted RBP16.42■□□□□ 0.22
FOXA1-205ENST00000557418 TRAV41A0A0B4J266 112 aa16.41■□□□□ 0.22
FOXA1-205ENST00000557418 MPTX1A8MV57 137 aa16.41■□□□□ 0.22
FOXA1-205ENST00000557418 SNAPC5O75971 98 aa16.41■□□□□ 0.22
FOXA1-205ENST00000557418 PPIFP30405 207 aaKnown RBP16.41■□□□□ 0.22
FOXA1-205ENST00000557418 CRIP2P52943 208 aaPredicted RBP16.41■□□□□ 0.22
FOXA1-205ENST00000557418 GNB1P62873 340 aa16.41■□□□□ 0.22
FOXA1-205ENST00000557418 ZNF429Q86V71 674 aa16.41■□□□□ 0.22
FOXA1-205ENST00000557418 QTRT1Q9BXR0 403 aaKnown RBP16.41■□□□□ 0.22
FOXA1-205ENST00000557418 COA4Q9NYJ1 87 aa16.41■□□□□ 0.22
FOXA1-205ENST00000557418 TEX50A0A1B0GTY4 177 aa16.4■□□□□ 0.22
FOXA1-205ENST00000557418 A0A1B0GU03 582 aa16.4■□□□□ 0.22
FOXA1-205ENST00000557418 PITX3O75364 302 aa16.4■□□□□ 0.22
FOXA1-205ENST00000557418 SLC25A6P12236 298 aa16.4■□□□□ 0.22
FOXA1-205ENST00000557418 HOXD3P31249 432 aaPredicted RBP16.4■□□□□ 0.22
FOXA1-205ENST00000557418 KRTAP10-11P60412 298 aa16.4■□□□□ 0.22
FOXA1-205ENST00000557418 UXS1Q8NBZ7 420 aa16.4■□□□□ 0.22
FOXA1-205ENST00000557418 OR4A16Q8NH70 328 aa16.4■□□□□ 0.22
FOXA1-205ENST00000557418 SRSF12Q8WXF0 261 aaKnown RBP16.4■□□□□ 0.22
FOXA1-205ENST00000557418 ARPC1AQ92747 370 aa16.4■□□□□ 0.22
FOXA1-205ENST00000557418 KLK15Q9H2R5 256 aa16.4■□□□□ 0.22
FOXA1-205ENST00000557418 CCSO14618 274 aa16.39■□□□□ 0.21
FOXA1-205ENST00000557418 CNIH1O95406 144 aa16.39■□□□□ 0.21
FOXA1-205ENST00000557418 SULT1A3P0DMM9 295 aa16.39■□□□□ 0.21
FOXA1-205ENST00000557418 SULT1A4P0DMN0 295 aa16.39■□□□□ 0.21
FOXA1-205ENST00000557418 RPL27AP46776 148 aaKnown RBP16.39■□□□□ 0.21
FOXA1-205ENST00000557418 SMCO1Q147U7 214 aa16.39■□□□□ 0.21
FOXA1-205ENST00000557418 DEFB136Q30KP8 78 aa16.39■□□□□ 0.21
FOXA1-205ENST00000557418 C19orf54Q5BKX5 351 aa16.39■□□□□ 0.21
FOXA1-205ENST00000557418 OR10C1Q96KK4 312 aa16.39■□□□□ 0.21
FOXA1-205ENST00000557418 FAM103A1Q9BTL3 118 aaKnown RBP16.39■□□□□ 0.21
FOXA1-205ENST00000557418 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.39■□□□□ 0.21
FOXA1-205ENST00000557418 ZNF257Q9Y2Q1 563 aa16.39■□□□□ 0.21
FOXA1-205ENST00000557418 OR51B2Q9Y5P1 312 aa16.39■□□□□ 0.21
FOXA1-205ENST00000557418 DNAH3Q8TD57 4116 aa16.39■□□□□ 0.21
FOXA1-205ENST00000557418 TEX22C9J3V5 150 aa16.38■□□□□ 0.21
FOXA1-205ENST00000557418 ST8SIA3O43173 380 aa16.38■□□□□ 0.21
FOXA1-205ENST00000557418 ACTL6BO94805 426 aa16.38■□□□□ 0.21
FOXA1-205ENST00000557418 IFNA21P01568 189 aa16.38■□□□□ 0.21
FOXA1-205ENST00000557418 IGLV1-40P01703 118 aa16.38■□□□□ 0.21
FOXA1-205ENST00000557418 EGFEM1PQ0D2K5 195 aa16.38■□□□□ 0.21
FOXA1-205ENST00000557418 TMEM267Q0VDI3 215 aaPredicted RBP16.38■□□□□ 0.21
FOXA1-205ENST00000557418 ASPHD1Q5U4P2 390 aa16.38■□□□□ 0.21
FOXA1-205ENST00000557418 Q6ZNX1 250 aa16.38■□□□□ 0.21
FOXA1-205ENST00000557418 OR5B3Q8NH48 314 aa16.38■□□□□ 0.21
FOXA1-205ENST00000557418 GRPEL2Q8TAA5 225 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms