RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 DUX3Q96PT4 197 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 ELL3Q9HB65 397 aaPredicted RBP4.27□□□□□ -1.73
TMEM260-210ENST00000556422 PRSS50Q9UI38 385 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 CDC42EP3Q9UKI2 254 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 TMEM50AO95807 157 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 NGFP01138 241 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 TPT1P13693 172 aaKnown RBP4.27□□□□□ -1.73
TMEM260-210ENST00000556422 RRADP55042 308 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 RNPS1Q15287 305 aaKnown RBP4.27□□□□□ -1.73
TMEM260-210ENST00000556422 ACOT6Q3I5F7 207 aaPredicted RBP4.27□□□□□ -1.73
TMEM260-210ENST00000556422 C6orf226Q5I0X4 101 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 OR5H2Q8NGV7 314 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 BORCS8Q96FH0 119 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 OR10C1Q96KK4 312 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 IL36GQ9NZH8 169 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 C1QTNF9BB2RNN3 333 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 F8VVB4 439 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 F8VWA3 439 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 CT45A10P0DMU9 189 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 LYL1P12980 280 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 AMY2BP19961 511 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 EFNB3Q15768 340 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 LRRC37A5PQ49AS3 106 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 C11orf87Q6NUJ2 197 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 DPPA3Q6W0C5 159 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 ADAMTSL5Q6ZMM2 481 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 TEX29Q8N6K0 151 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 SECTM1Q8WVN6 248 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 HS3ST6Q96QI5 342 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 HSPB9Q9BQS6 159 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 DEFB127Q9H1M4 99 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 GCM1Q9NP62 436 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 EHFQ9NZC4 300 aa4.27□□□□□ -1.73
TMEM260-210ENST00000556422 ACACBO00763 2458 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 C5orf49A4QMS7 147 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 NBR2O15453 112 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 LILRA1O75019 489 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 SYNGR4O95473 234 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 CT45A6P0DMU7 189 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 CT45A5P0DMU8 189 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 CT45A7P0DMV0 189 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 TAS2R46P59540 309 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 RPEL1Q2QD12 228 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 CT45A1Q5HYN5 189 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 TTC32Q5I0X7 151 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 FBXL14Q8N1E6 418 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 ZNF611Q8N823 705 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 FDCSPQ8NFU4 85 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 OR4B1Q8NGF8 309 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 CT45A3Q8NHU0 189 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 VN1R17PQ8TDU5 208 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 SPTBN4Q9H254 2564 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 FABP5P3A8MUU1 101 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 A8MZ25 164 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 B4DEV8 164 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 FCGR3AP08637 254 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 SLC25A4P12235 298 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 RPL35AP18077 110 aaKnown RBP4.26□□□□□ -1.73
TMEM260-210ENST00000556422 GPM6AP51674 278 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 ZNF345Q14585 488 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 H2BFWTQ7Z2G1 175 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 MRGPRGQ86SM5 289 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 CACFD1Q9UGQ2 172 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 SELENOKQ9Y6D0 94 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 TRGV5A0A0B4J1U4 118 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 OR2T8A6NH00 312 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 H0YIZ8 118 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 SFT2D2O95562 160 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 OPRM1P35372 400 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 RPL8P62917 257 aaKnown RBP4.26□□□□□ -1.73
TMEM260-210ENST00000556422 ZFAND6Q6FIF0 208 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 IGFL2Q6UWQ7 119 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 UNQ6126/PRO20091Q6UXV3 157 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 ZNF66Q6ZN08 573 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 OSR2Q8N2R0 312 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 STARD4Q96DR4 205 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 TMEM126AQ9H061 195 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 GP6Q9HCN6 339 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 IL36RNQ9UBH0 155 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 WASHC3Q9Y3C0 194 aa4.26□□□□□ -1.73
TMEM260-210ENST00000556422 IGHV1-69-2A0A0G2JMI3 117 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 HBZP02008 142 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 CRYAAP02489 173 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 AADACP22760 399 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 IL15RAQ13261 267 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 GUSBP1Q15486 140 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 SPATA45Q537H7 98 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 SLC25A26Q70HW3 274 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 KCNRGQ8N5I3 272 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 DNAJC30Q96LL9 226 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 BARX1Q9HBU1 254 aaPredicted RBP4.25□□□□□ -1.73
TMEM260-210ENST00000556422 C1orf123Q9NWV4 160 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 ZZEF1O43149 2961 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 TRBV6-7A0A0A0MS04 114 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 TRAV38-1A0A0B4J264 116 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 A0A1B0GW64 132 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 OR4C46A6NHA9 309 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 CLDN34H7C241 214 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 IGHG3P01860 377 aa4.25□□□□□ -1.73
TMEM260-210ENST00000556422 HKR1P10072 659 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms