RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 ZNF66Q6ZN08 573 aa7.89□□□□□ -1.15
SYNE2-221ENST00000556342 GALNT14Q96FL9 552 aa7.89□□□□□ -1.15
SYNE2-221ENST00000556342 DAZ1Q9NQZ3 744 aaKnown RBP7.89□□□□□ -1.15
SYNE2-221ENST00000556342 SCN3BQ9NY72 215 aa7.89□□□□□ -1.15
SYNE2-221ENST00000556342 BET1LQ9NYM9 111 aa7.89□□□□□ -1.15
SYNE2-221ENST00000556342 TAS2R8Q9NYW2 309 aa7.89□□□□□ -1.15
SYNE2-221ENST00000556342 IGLC7A0M8Q6 106 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 METTL21EPA6NDL7 271 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 OR4C46A6NHA9 309 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 IFITM5A6NNB3 132 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 TGOLN2O43493 480 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 RPA2P15927 270 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 PTBP1P26599 531 aaKnown RBP eCLIP7.88□□□□□ -1.15
SYNE2-221ENST00000556342 RCN1Q15293 331 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 TIMM50Q3ZCQ8 353 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 OGFRL1Q5TC84 451 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-221ENST00000556342 LAMTOR1Q6IAA8 161 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 OR4A5Q8NH83 315 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 GPHA2Q96T91 129 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 MFFQ9GZY8 342 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 DCSTAMPQ9H295 470 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 ACOT13Q9NPJ3 140 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 THYN1Q9P016 225 aa7.88□□□□□ -1.15
SYNE2-221ENST00000556342 TRAV1-2A0A0B4J238 106 aa7.87□□□□□ -1.15
SYNE2-221ENST00000556342 PDCD5O14737 125 aa7.87□□□□□ -1.15
SYNE2-221ENST00000556342 CASQ2O14958 399 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-221ENST00000556342 NANOS2P60321 138 aaKnown RBP7.87□□□□□ -1.15
SYNE2-221ENST00000556342 RBMS2Q15434 407 aaKnown RBP7.87□□□□□ -1.15
SYNE2-221ENST00000556342 CDNFQ49AH0 187 aa7.87□□□□□ -1.15
SYNE2-221ENST00000556342 HACD4Q5VWC8 232 aa7.87□□□□□ -1.15
SYNE2-221ENST00000556342 CNIH2Q6PI25 160 aa7.87□□□□□ -1.15
SYNE2-221ENST00000556342 OR5B3Q8NH48 314 aa7.87□□□□□ -1.15
SYNE2-221ENST00000556342 MGLLQ99685 303 aa7.87□□□□□ -1.15
SYNE2-221ENST00000556342 SRSF8Q9BRL6 282 aaKnown RBP7.87□□□□□ -1.15
SYNE2-221ENST00000556342 KRTAP4-7Q9BYR0 210 aa7.87□□□□□ -1.15
SYNE2-221ENST00000556342 C6orf62Q9GZU0 229 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-221ENST00000556342 ATG5Q9H1Y0 275 aa7.87□□□□□ -1.15
SYNE2-221ENST00000556342 C11orf68Q9H3H3 251 aaKnown RBP7.87□□□□□ -1.15
SYNE2-221ENST00000556342 DUSP21Q9H596 190 aa7.87□□□□□ -1.15
SYNE2-221ENST00000556342 HRASLSQ9HDD0 168 aa7.87□□□□□ -1.15
SYNE2-221ENST00000556342 FBXL17Q9UF56 701 aa7.87□□□□□ -1.15
SYNE2-221ENST00000556342 TRAV3A0A0B4J244 114 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 OR2T8A6NH00 312 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 IFNA4P05014 189 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 CTSDP07339 412 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-221ENST00000556342 HOXA5P20719 270 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 APRG1Q8IVJ8 170 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 C11orf45Q8TAV5 145 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 CD300LFQ8TDQ1 290 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 VN1R17PQ8TDU5 208 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 NUDCD2Q8WVJ2 157 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 BSCL2Q96G97 398 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-221ENST00000556342 RARRES2Q99969 163 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 AIFM2Q9BRQ8 373 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 C20orf24Q9BUV8 137 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 COMMD5Q9GZQ3 224 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 CSTL1Q9H114 145 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 ANXA10Q9UJ72 324 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 PLA2G2DQ9UNK4 145 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 TPRKBQ9Y3C4 175 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 PKHD1P08F94 4074 aa7.86□□□□□ -1.15
SYNE2-221ENST00000556342 TMEM235A6NFC5 223 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 KRTAP9-7A8MTY7 169 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 MPTX1A8MV57 137 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 K7EMT4 169 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 NDUFA4O00483 81 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 UPK2O00526 184 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 RBFOX2O43251 390 aaKnown RBP eCLIP7.85□□□□□ -1.15
SYNE2-221ENST00000556342 TNFSF12O43508 249 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 RGS10O43665 173 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 RAB3BP20337 219 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 MYL9P24844 172 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 TCTAP57738 103 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 SPSB3Q6PJ21 355 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 SPAG16Q8N0X2 631 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 GDPD1Q8N9F7 314 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 C2CD4CQ8TF44 421 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 ATP6V0BQ99437 205 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 QTRT1Q9BXR0 403 aaKnown RBP7.85□□□□□ -1.15
SYNE2-221ENST00000556342 CCDC90BQ9GZT6 254 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 VCXQ9H320 206 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 CCL28Q9NRJ3 127 aa7.85□□□□□ -1.15
SYNE2-221ENST00000556342 IGHV3OR16-8A0A075B7F1 116 aa7.84□□□□□ -1.15
SYNE2-221ENST00000556342 CYB5BO43169 146 aa7.84□□□□□ -1.15
SYNE2-221ENST00000556342 ZNF207O43670 478 aaKnown RBP7.84□□□□□ -1.15
SYNE2-221ENST00000556342 SSX5O60225 188 aa7.84□□□□□ -1.15
SYNE2-221ENST00000556342 NQO2P16083 231 aa7.84□□□□□ -1.15
SYNE2-221ENST00000556342 TAS2R31P59538 309 aa7.84□□□□□ -1.15
SYNE2-221ENST00000556342 MSMO1Q15800 293 aa7.84□□□□□ -1.15
SYNE2-221ENST00000556342 POU2AF1Q16633 256 aa7.84□□□□□ -1.15
SYNE2-221ENST00000556342 NR2C2APQ86WQ0 139 aa7.84□□□□□ -1.15
SYNE2-221ENST00000556342 OR10W1Q8NGF6 305 aa7.84□□□□□ -1.15
SYNE2-221ENST00000556342 OR13F1Q8NGS4 319 aa7.84□□□□□ -1.15
SYNE2-221ENST00000556342 OR11H2Q8NH07 326 aa7.84□□□□□ -1.15
SYNE2-221ENST00000556342 SECTM1Q8WVN6 248 aa7.84□□□□□ -1.15
SYNE2-221ENST00000556342 CHRDL1Q9BU40 450 aa7.84□□□□□ -1.15
SYNE2-221ENST00000556342 IGHV3-21A0A0B4J1V1 117 aa7.83□□□□□ -1.16
SYNE2-221ENST00000556342 C15orf62A8K5M9 175 aa7.83□□□□□ -1.16
SYNE2-221ENST00000556342 SULT1C2O00338 296 aa7.83□□□□□ -1.16
SYNE2-221ENST00000556342 EBAG9O00559 213 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms