RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 TRGC2P03986 189 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 NPBWR2P48146 333 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 LHX2P50458 406 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 SUMO2P61956 95 aaKnown RBP9.03□□□□□ -0.96
ACTN1-216ENST00000556083 BSPH1Q075Z2 132 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 SRSF8Q9BRL6 282 aaKnown RBP9.03□□□□□ -0.96
ACTN1-216ENST00000556083 RPP21Q9H633 154 aaKnown RBP9.03□□□□□ -0.96
ACTN1-216ENST00000556083 YAE1D1Q9NRH1 226 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 TPRP12270 2363 aaKnown RBP9.03□□□□□ -0.96
ACTN1-216ENST00000556083 ZNFX1Q9P2E3 1918 aaKnown RBP9.03□□□□□ -0.96
ACTN1-216ENST00000556083 F2Z2F3 143 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 FAM71F2Q6NXP2 309 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 ABHD17AQ96GS6 310 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 IMMP2LQ96T52 175 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 C7orf69Q9H7B7 122 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 NXT2Q9NPJ8 142 aaKnown RBP9.03□□□□□ -0.96
ACTN1-216ENST00000556083 PEF1Q9UBV8 284 aaKnown RBP9.03□□□□□ -0.96
ACTN1-216ENST00000556083 A1L4Q6 167 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 HOXA5P20719 270 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 IGHV1-2P23083 117 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 CD69Q07108 199 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 SPSB3Q6PJ21 355 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 ORMDL3Q8N138 153 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 SIGLEC12Q96PQ1 595 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 WDR90Q96KV7 1748 aa9.02□□□□□ -0.96
ACTN1-216ENST00000556083 TRAV21A0A0B4J279 112 aa9.02□□□□□ -0.96
ACTN1-216ENST00000556083 EPOPA6NHQ4 379 aa9.02□□□□□ -0.96
ACTN1-216ENST00000556083 C15orf61A6NNL5 157 aa9.02□□□□□ -0.96
ACTN1-216ENST00000556083 ICAM4Q14773 271 aa9.02□□□□□ -0.96
ACTN1-216ENST00000556083 DMRT1Q9Y5R6 373 aa9.02□□□□□ -0.96
ACTN1-216ENST00000556083 ATAD5Q96QE3 1844 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 PLP1P60201 277 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 CCL20P78556 96 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 PRSS53Q2L4Q9 553 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 DNLZQ5SXM8 178 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 MBNL2Q5VZF2 373 aaKnown RBP9.02□□□□□ -0.97
ACTN1-216ENST00000556083 OSTCQ9NRP0 149 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 METRNQ9UJH8 293 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 A0A1B0GTI1 187 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 LOC107984156A0A0G2JMH3 177 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 IGKV1D-33P01593 117 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 IGKV1-33P01594 117 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 THBDP07204 575 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 APELAP0DMC3 54 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 ARL17AQ8IVW1 177 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 SMPXQ9UHP9 88 aa9.02□□□□□ -0.97
ACTN1-216ENST00000556083 TRIP12Q14669 1992 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-216ENST00000556083 A0A0G2JK05 382 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 IZUMO1RA6ND01 250 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 SIGLEC5O15389 551 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 ZNF25P17030 456 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-216ENST00000556083 IFITM3Q01628 133 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 ORMDL2Q53FV1 153 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 ATP5L2Q7Z4Y8 100 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 C17orf82Q86X59 251 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-216ENST00000556083 WBP1Q96G27 269 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 RTN4RQ9BZR6 473 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 OR9G9P0C7N8 305 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 SMIM13P0DJ93 91 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 H2BFSP57053 126 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 FER1L6-AS1Q8NA97 138 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 ZNRF1Q8ND25 227 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 NEU1Q99519 415 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 TIAF1O95411 115 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 PRCDQ00LT1 54 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 FAM27E3Q08E93 113 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 ZNF497Q6ZNH5 498 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 TMEM167AQ8TBQ9 72 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 PLSCR4Q9NRQ2 329 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 COL11A2P13942 1736 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-216ENST00000556083 FOXI3A8MTJ6 420 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-216ENST00000556083 LTBRP36941 435 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 LY6EQ16553 131 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 LINC01560Q8TB33 94 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 SLC25A2Q9BXI2 301 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 FBXL15Q9H469 300 aa9.01□□□□□ -0.97
ACTN1-216ENST00000556083 RFPL3SP0C7P2 107 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 VDAC2P45880 294 aaPredicted RBP9□□□□□ -0.97
ACTN1-216ENST00000556083 SEC11AP67812 179 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 CFAP161Q6P656 301 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 RASL11AQ6T310 242 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 PARP14Q460N5 1801 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9□□□□□ -0.97
ACTN1-216ENST00000556083 UMODP07911 640 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 WNT2P09544 360 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 ZXDCQ2QGD7 858 aaPredicted RBP9□□□□□ -0.97
ACTN1-216ENST00000556083 WDR82Q6UXN9 313 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 OR13A1Q8NGR1 328 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 TRAV24A0A0B4J272 114 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 M0R1W7 72 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 PLAUP00749 431 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 GATA3P23771 443 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 CNTFRP26992 372 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 EFNA4P52798 201 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 WFIKKN1Q96NZ8 548 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 DUX3Q96PT4 197 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 MYO16Q9Y6X6 1858 aa9□□□□□ -0.97
ACTN1-216ENST00000556083 TCRBV4S1A1TA0A5B7 111 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 H0YL77 283 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 KIR3DL3Q8N743 410 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms