RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 ICAM4Q14773 271 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 CNN3Q15417 329 aaKnown RBP3.18□□□□□ -1.9
LINC00648-202ENST00000555985 DMRTC1Q5HYR2 192 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 ZNF506Q5JVG8 444 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 OR5T1Q8NG75 326 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 TSEN15Q8WW01 171 aaKnown RBP3.18□□□□□ -1.9
LINC00648-202ENST00000555985 CORO2AQ92828 525 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 PTX4Q96A99 478 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 FGGYQ96C11 551 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 PYGO2Q9BRQ0 406 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 PCGF1Q9BSM1 259 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 C7orf69Q9H7B7 122 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 IL36RNQ9UBH0 155 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 CLN8Q9UBY8 286 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 SOX21Q9Y651 276 aaPredicted RBP3.18□□□□□ -1.9
LINC00648-202ENST00000555985 TENM1Q9UKZ4 2725 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 HIVEP2P31629 2446 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 TRAV39A0A0B4J263 110 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A8PA6NJQ4 464 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 ZNF705FA8MVS1 300 aaPredicted RBP3.18□□□□□ -1.9
LINC00648-202ENST00000555985 ODF3BA8MYP8 253 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 TOMM40O96008 361 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 ZNF705DP0CH99 300 aaPredicted RBP3.18□□□□□ -1.9
LINC00648-202ENST00000555985 ZNF705BP0CI00 300 aaPredicted RBP3.18□□□□□ -1.9
LINC00648-202ENST00000555985 TMEM225BP0DP42 221 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 BCL3P20749 454 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 PRDX2P32119 198 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 FGF12P61328 243 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 RANP62826 216 aaKnown RBP3.18□□□□□ -1.9
LINC00648-202ENST00000555985 VAMP2P63027 116 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 PDCD1Q15116 288 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 FAM189A2Q15884 450 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 TAF9Q16594 264 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 IAH1Q2TAA2 248 aaPredicted RBP3.18□□□□□ -1.9
LINC00648-202ENST00000555985 SPIN3Q5JUX0 258 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 ZNF880Q6PDB4 577 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 ZNF66Q6ZN08 573 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 TMEM182Q6ZP80 229 aaPredicted RBP3.18□□□□□ -1.9
LINC00648-202ENST00000555985 LINC01551Q86U37 167 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 SGPP2Q8IWX5 399 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 Q8IYB0 196 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 BCL6BQ8N143 479 aaPredicted RBP3.18□□□□□ -1.9
LINC00648-202ENST00000555985 GAPTQ8N292 157 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 OR10G4Q8NGN3 311 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 FAM216AQ8WUB2 273 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 TMEM170AQ8WVE7 144 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 NUDT11Q96G61 164 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 SCGB3A2Q96PL1 93 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 RTBDNQ9BSG5 229 aaPredicted RBP3.18□□□□□ -1.9
LINC00648-202ENST00000555985 CTDSP1Q9GZU7 261 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 CNTD2Q9H8S5 307 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 RNF150Q9ULK6 438 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 HSF4Q9ULV5 492 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 POLDIP2Q9Y2S7 368 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 TMEM89A2RUT3 159 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 E5RGE8 158 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 TMPRSS2O15393 492 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 GPR137BO60478 399 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 PSPNO60542 156 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 PFN1P07737 140 aaKnown RBP3.18□□□□□ -1.9
LINC00648-202ENST00000555985 PI3P19957 117 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 GLRA1P23415 457 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 FPR2P25090 351 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 UCP3P55916 312 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 QRFPP83859 136 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 SMIM21Q3B7S5 101 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 VAX1Q5SQQ9 334 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 GPR157Q5UAW9 335 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 TMEM200BQ69YZ2 307 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 Q6YL49 198 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 TEX43Q6ZNM6 134 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 CHST4Q8NCG5 386 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 ZNRF1Q8ND25 227 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 OR2D3Q8NGH3 330 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 VPS25Q9BRG1 176 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 RBKSQ9H477 322 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 NSG2Q9Y328 171 aa3.18□□□□□ -1.9
LINC00648-202ENST00000555985 LSM5Q9Y4Y9 91 aaKnown RBP3.18□□□□□ -1.9
LINC00648-202ENST00000555985 IGHV1-69DA0A0B4J2H0 117 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 FOXI3A8MTJ6 420 aaPredicted RBP3.17□□□□□ -1.9
LINC00648-202ENST00000555985 SLC33A1O00400 549 aaPredicted RBP3.17□□□□□ -1.9
LINC00648-202ENST00000555985 YPEL1O60688 119 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 IGHV1-69P01742 117 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 RNASE1P07998 156 aaKnown RBP3.17□□□□□ -1.9
LINC00648-202ENST00000555985 PRTN3P24158 256 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 S100A7P31151 101 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 BMI1P35226 326 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 CEBPDP49716 269 aaPredicted RBP3.17□□□□□ -1.9
LINC00648-202ENST00000555985 KISS1Q15726 138 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 ACOT6Q3I5F7 207 aaPredicted RBP3.17□□□□□ -1.9
LINC00648-202ENST00000555985 TDRG1Q3Y452 100 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 C1orf100Q5SVJ3 147 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 LDLRAD2Q5SZI1 272 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A2PQ658T7 463 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 VMO1Q7Z5L0 202 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 LHFPL1Q86WI0 220 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 TMEM86BQ8N661 226 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 STPG4Q8N801 248 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 FAM46BQ96A09 425 aa3.17□□□□□ -1.9
LINC00648-202ENST00000555985 MOB3AQ96BX8 217 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms