RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 POLR1DQ9Y2S0 133 aa2.29□□□□□ -2.04
SRP54-209ENST00000555746 ZNF780BQ9Y6R6 833 aa2.29□□□□□ -2.04
SRP54-209ENST00000555746 U3KQ87 197 aa2.29□□□□□ -2.04
SRP54-209ENST00000555746 ANK3Q12955 4377 aaKnown RBP2.28□□□□□ -2.04
SRP54-209ENST00000555746 PLIN4Q96Q06 1357 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 PRR14LQ5THK1 2151 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 MED12Q93074 2177 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 TRAV30A0A087WSZ9 112 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 A0A1B0GV50 99 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 TMEM218A2RU14 115 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 H7C417 338 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 J3KT08 172 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 M0R1B8 84 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 CORTO00230 105 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 CCL21O00585 134 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 GABRPO00591 440 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 MRPS12O15235 138 aaKnown RBP2.28□□□□□ -2.04
SRP54-209ENST00000555746 PLXNB1O43157 2135 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 OR7C2O60412 319 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 FKBP6O75344 327 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 GCM2O75603 506 aaPredicted RBP2.28□□□□□ -2.04
SRP54-209ENST00000555746 MMP23AO75900 390 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 CDRT1O95170 752 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 C6orf47O95873 294 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 CT45A6P0DMU7 189 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 CT45A5P0DMU8 189 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 CT45A7P0DMV0 189 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 OR5H8P0DN80 308 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 ESDP10768 282 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 TCN2P20062 427 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 COX5AP20674 150 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 APLNRP35414 380 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 GLRXP35754 106 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 PTGDSP41222 190 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 GZMMP51124 257 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 EMP1P54849 157 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 ARPP19P56211 112 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 OR12D2P58182 307 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 PFN3P60673 137 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 RPL26P61254 145 aaKnown RBP2.28□□□□□ -2.04
SRP54-209ENST00000555746 RPS14P62263 151 aaKnown RBP2.28□□□□□ -2.04
SRP54-209ENST00000555746 SLC35A2P78381 396 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 RPL18AQ02543 176 aaKnown RBP2.28□□□□□ -2.04
SRP54-209ENST00000555746 RHEBQ15382 184 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 OR8B8Q15620 311 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 ACOT6Q3I5F7 207 aaPredicted RBP2.28□□□□□ -2.04
SRP54-209ENST00000555746 CT45A1Q5HYN5 189 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 KLF17Q5JT82 389 aaPredicted RBP2.28□□□□□ -2.04
SRP54-209ENST00000555746 C6orf52Q5T4I8 152 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 AVPI1Q5T686 147 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 TPTE2P1Q5T6R2 138 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 NANOGP8Q6NSW7 305 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 SFXN4Q6P4A7 337 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 PRSS41Q7RTY9 318 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 CALHM3Q86XJ0 350 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 UMODL1-AS1Q8N2C9 162 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 SLC25A45Q8N413 288 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 TMEM86BQ8N661 226 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 TMEM252Q8N6L7 170 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 Q8N7P7 452 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 COX18Q8N8Q8 333 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 OR5A1Q8NGJ0 315 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 OR2G2Q8NGZ5 317 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 OR51Q1Q8NH59 317 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 CT45A3Q8NHU0 189 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 GPR119Q8TDV5 335 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 SLC37A2Q8TED4 501 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 CYGBQ8WWM9 190 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 TMEM159Q96B96 161 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 PPCDCQ96CD2 204 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 ISOC1Q96CN7 298 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 SLC35G5Q96KT7 338 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 CCDC115Q96NT0 180 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 COL21A1Q96P44 957 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 GPR82Q96P67 336 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 MS4A4EQ96PG1 132 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 TBX15Q96SF7 602 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 TMEM70Q9BUB7 260 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 PBDC1Q9BVG4 233 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 EBPLQ9BY08 206 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 CST9LQ9H4G1 147 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 REEP1Q9H902 201 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 NANOGQ9H9S0 305 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 TAF9BQ9HBM6 251 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 SH2D2AQ9NP31 389 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 MMP26Q9NRE1 261 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 LYRM2Q9NU23 88 aaPredicted RBP2.28□□□□□ -2.04
SRP54-209ENST00000555746 C14orf105Q9NVL8 296 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 ERG28Q9UKR5 140 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 RAB22AQ9UL26 194 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 SNX12Q9UMY4 172 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 RPL26L1Q9UNX3 145 aaKnown RBP2.28□□□□□ -2.04
SRP54-209ENST00000555746 CCL26Q9Y258 94 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 KLF12Q9Y4X4 402 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 U3KQA8 63 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 V9GYS6 101 aa2.28□□□□□ -2.04
SRP54-209ENST00000555746 HERC2O95714 4834 aa2.28□□□□□ -2.05
SRP54-209ENST00000555746 TRAV36DV7A0A075B6V5 113 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 A0A087WX48 190 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms