RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 CITED4Q96RK1 184 aa10.43□□□□□ -0.74
PCNX4-209ENST00000555569 NEURL2Q9BR09 285 aa10.43□□□□□ -0.74
PCNX4-209ENST00000555569 SPATA25Q9BR10 227 aa10.43□□□□□ -0.74
PCNX4-209ENST00000555569 ZC4H2Q9NQZ6 224 aa10.43□□□□□ -0.74
PCNX4-209ENST00000555569 SLC2A8Q9NY64 477 aa10.43□□□□□ -0.74
PCNX4-209ENST00000555569 THYN1Q9P016 225 aa10.43□□□□□ -0.74
PCNX4-209ENST00000555569 TEX50A0A1B0GTY4 177 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 ZNF320A2RRD8 509 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 A8MWP6 167 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 SNAPC5O75971 98 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 TPPPO94811 219 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 KRASP01116 189 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 OR13C7P0DN81 318 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 CBLN1P23435 193 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 S100GP29377 79 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 G6PCP35575 357 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 GUCA2BQ16661 112 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 MZT2AQ6P582 158 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 GDPD1Q8N9F7 314 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 ZNF502Q8TBZ5 544 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 CACNG8Q8WXS5 425 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 HINT2Q9BX68 163 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 PLEKHA3Q9HB20 300 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 NDUFA4L2Q9NRX3 87 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 NSG2Q9Y328 171 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 DNAH7Q8WXX0 4024 aa10.42□□□□□ -0.74
PCNX4-209ENST00000555569 TMEM213A2RRL7 107 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 FAM25AB3EWG3 89 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 FAM25CB3EWG5 89 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 FAM25GB3EWG6 89 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 GABARAPO95166 117 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 SERPINE2P07093 398 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 CD7P09564 240 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 SMIM18P0DKX4 95 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 PTBP1P26599 531 aaKnown RBP eCLIP10.41□□□□□ -0.746e-14■■■□□ 18.3
PCNX4-209ENST00000555569 GPR183P32249 361 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 WT1-ASQ06250 92 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 CASC10Q5T4H9 136 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 SLC25A24Q6NUK1 477 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 VN1R17PQ8TDU5 208 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 LSM10Q969L4 123 aaKnown RBP10.41□□□□□ -0.74
PCNX4-209ENST00000555569 WDR89Q96FK6 387 aaPredicted RBP10.41□□□□□ -0.74
PCNX4-209ENST00000555569 NAA50Q9GZZ1 169 aaKnown RBP10.41□□□□□ -0.74
PCNX4-209ENST00000555569 PALMDQ9NP74 551 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 FAM212BQ9NTI7 297 aaPredicted RBP10.41□□□□□ -0.74
PCNX4-209ENST00000555569 PRNDQ9UKY0 176 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 OR51B2Q9Y5P1 312 aa10.41□□□□□ -0.74
PCNX4-209ENST00000555569 LYL1P12980 280 aa10.4□□□□□ -0.74
PCNX4-209ENST00000555569 UCP3P55916 312 aa10.4□□□□□ -0.74
PCNX4-209ENST00000555569 CTF1Q16619 201 aa10.4□□□□□ -0.74
PCNX4-209ENST00000555569 ZNF57Q68EA5 555 aaPredicted RBP10.4□□□□□ -0.74
PCNX4-209ENST00000555569 PLET1Q6UQ28 207 aa10.4□□□□□ -0.74
PCNX4-209ENST00000555569 TBC1D26Q86UD7 250 aa10.4□□□□□ -0.74
PCNX4-209ENST00000555569 SLC38A6Q8IZM9 456 aa10.4□□□□□ -0.74
PCNX4-209ENST00000555569 UXS1Q8NBZ7 420 aa10.4□□□□□ -0.74
PCNX4-209ENST00000555569 AP3S1Q92572 193 aa10.4□□□□□ -0.74
PCNX4-209ENST00000555569 TSC22D3Q99576 134 aa10.4□□□□□ -0.74
PCNX4-209ENST00000555569 FKBP11Q9NYL4 201 aa10.4□□□□□ -0.74
PCNX4-209ENST00000555569 F11RQ9Y624 299 aaKnown RBP10.4□□□□□ -0.74
PCNX4-209ENST00000555569 CEPT1Q9Y6K0 416 aa10.4□□□□□ -0.74
PCNX4-209ENST00000555569 IGHV3-35A0A0C4DH35 117 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 OR11H12B2RN74 326 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 M0QYG6 137 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 TGOLN2O43493 480 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 IFNA6P05013 189 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 ZNF182P17025 639 aaPredicted RBP10.39□□□□□ -0.75
PCNX4-209ENST00000555569 TM4SF20Q53R12 229 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 RNASE12Q5GAN4 147 aaKnown RBP10.39□□□□□ -0.75
PCNX4-209ENST00000555569 GPR107Q5VW38 600 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 UNQ9165/PRO28630Q6UXU0 137 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 LINC00322Q6ZN03 302 aaPredicted RBP10.39□□□□□ -0.75
PCNX4-209ENST00000555569 TMEM61Q8N0U2 210 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 DEFB125Q8N687 156 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 OR5B3Q8NH48 314 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 MARC2Q969Z3 335 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 TMEM56Q96MV1 263 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 ZNF436Q9C0F3 470 aaPredicted RBP10.39□□□□□ -0.75
PCNX4-209ENST00000555569 WFDC10AQ9H1F0 79 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 EDA2RQ9HAV5 297 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 MLXQ9UH92 298 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 SELENOKQ9Y6D0 94 aa10.39□□□□□ -0.75
PCNX4-209ENST00000555569 OR2T8A6NH00 312 aa10.38□□□□□ -0.75
PCNX4-209ENST00000555569 C15orf61A6NNL5 157 aa10.38□□□□□ -0.75
PCNX4-209ENST00000555569 C8orf88P0DMB2 117 aa10.38□□□□□ -0.75
PCNX4-209ENST00000555569 MFAP2P55001 183 aa10.38□□□□□ -0.75
PCNX4-209ENST00000555569 ELLP55199 621 aaPredicted RBP10.38□□□□□ -0.75
PCNX4-209ENST00000555569 BTNL8Q6UX41 500 aa10.38□□□□□ -0.75
PCNX4-209ENST00000555569 SLC16A13Q7RTY0 426 aa10.38□□□□□ -0.75
PCNX4-209ENST00000555569 ISOC1Q96CN7 298 aa10.38□□□□□ -0.75
PCNX4-209ENST00000555569 SEC22AQ96IW7 307 aa10.38□□□□□ -0.75
PCNX4-209ENST00000555569 SRD5A3Q9H8P0 318 aa10.38□□□□□ -0.75
PCNX4-209ENST00000555569 TMEM14BQ9NUH8 114 aa10.38□□□□□ -0.75
PCNX4-209ENST00000555569 EXTL2Q9UBQ6 330 aa10.38□□□□□ -0.75
PCNX4-209ENST00000555569 UFC1Q9Y3C8 167 aa10.38□□□□□ -0.75
PCNX4-209ENST00000555569 IGHV3-21A0A0B4J1V1 117 aa10.37□□□□□ -0.75
PCNX4-209ENST00000555569 RBMY1BA6NDE4 496 aaKnown RBP10.37□□□□□ -0.75
PCNX4-209ENST00000555569 RBMY1EA6NEQ0 496 aaKnown RBP10.37□□□□□ -0.75
PCNX4-209ENST00000555569 DBX1A6NMT0 343 aa10.37□□□□□ -0.75
PCNX4-209ENST00000555569 IGKV1-39P01597 117 aa10.37□□□□□ -0.75
PCNX4-209ENST00000555569 IGKV1D-39P04432 117 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms