RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 L7N2F9 121 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 NDUFA3O95167 84 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 LY6G6DO95868 133 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 LYL1P12980 280 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 C4BPBP20851 252 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 DYNLT3P51808 116 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 SPCS3P61009 180 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 HSPE1P61604 102 aaKnown RBP8.13□□□□□ -1.11
SRP54-208ENST00000555557 VAMP2P63027 116 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 EXOSC2Q13868 293 aaKnown RBP8.13□□□□□ -1.11
SRP54-208ENST00000555557 TNXAQ16473 311 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 LRRC75BQ2VPJ9 315 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 Q71RC1 249 aaPredicted RBP8.13□□□□□ -1.11
SRP54-208ENST00000555557 DTD1Q8TEA8 209 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 COMMD5Q9GZQ3 224 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 C11orf1Q9H5F2 150 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 ZFP57Q9NU63 452 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 TNFSF18Q9UNG2 199 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 A0A1B0GW64 132 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 RNF222A6NCQ9 220 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 CGB1A6NKQ9 187 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 HMSDA8MTL9 139 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 E5RGE8 158 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 CA2P00918 260 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 IGHV4-59P01825 116 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 APELAP0DMC3 54 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 SRP14P37108 136 aaKnown RBP8.12□□□□□ -1.11
SRP54-208ENST00000555557 CAV2P51636 162 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 S100A12P80511 92 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 SSBP2P81877 361 aaPredicted RBP8.12□□□□□ -1.11
SRP54-208ENST00000555557 BTN1A1Q13410 526 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 C5orf64Q2M2E5 130 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 C9orf139Q6ZV77 190 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 Q8N9W7 124 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 OR10W1Q8NGF6 305 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 OR52E5Q8NH55 327 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 MFFQ9GZY8 342 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 PSENENQ9NZ42 101 aa8.12□□□□□ -1.11
SRP54-208ENST00000555557 TET2Q6N021 2002 aaPredicted RBP8.12□□□□□ -1.11
SRP54-208ENST00000555557 KRBOX1C9JBD0 128 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 MED6O75586 246 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 ACTL6BO94805 426 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 SPDEFO95238 335 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 HKR1P10072 659 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 CD99P14209 185 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 PVALBP20472 110 aaPredicted RBP8.11□□□□□ -1.11
SRP54-208ENST00000555557 NUP62P37198 522 aaPredicted RBP8.11□□□□□ -1.11
SRP54-208ENST00000555557 HOXA1P49639 335 aaPredicted RBP8.11□□□□□ -1.11
SRP54-208ENST00000555557 SPANXN5Q5MJ07 72 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 MMD2Q8IY49 270 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 INO80EQ8NBZ0 244 aaPredicted RBP8.11□□□□□ -1.11
SRP54-208ENST00000555557 BSCL2Q96G97 398 aaPredicted RBP8.11□□□□□ -1.11
SRP54-208ENST00000555557 RAB40CQ96S21 281 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 SLC25A33Q9BSK2 321 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 MED9Q9NWA0 146 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 FKBP11Q9NYL4 201 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 NAV3Q8IVL0 2385 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 HIVEP1P15822 2718 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 IGSF23A1L1A6 192 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 CUBNO60494 3623 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 FGF2P09038 288 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 RPL12P30050 165 aaKnown RBP8.11□□□□□ -1.11
SRP54-208ENST00000555557 VDAC2P45880 294 aaPredicted RBP8.11□□□□□ -1.11
SRP54-208ENST00000555557 IER3P46695 156 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 P2RY1P47900 373 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 PRCDQ00LT1 54 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 NHLH2Q02577 135 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 PDLIM3Q53GG5 364 aaPredicted RBP8.11□□□□□ -1.11
SRP54-208ENST00000555557 OR2C3Q8N628 320 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 OR1L8Q8NGR8 309 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 OR5B3Q8NH48 314 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 MARC2Q969Z3 335 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 RBM14Q96PK6 669 aaKnown RBP8.11□□□□□ -1.11
SRP54-208ENST00000555557 FAM103A1Q9BTL3 118 aaKnown RBP8.11□□□□□ -1.11
SRP54-208ENST00000555557 TMUB1Q9BVT8 246 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 GSX1Q9H4S2 264 aaPredicted RBP8.11□□□□□ -1.11
SRP54-208ENST00000555557 HEYLQ9NQ87 328 aaPredicted RBP8.11□□□□□ -1.11
SRP54-208ENST00000555557 NDUFA4L2Q9NRX3 87 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 C1RLQ9NZP8 487 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 ZNF257Q9Y2Q1 563 aa8.11□□□□□ -1.11
SRP54-208ENST00000555557 MXRA5Q9NR99 2828 aa8.1□□□□□ -1.11
SRP54-208ENST00000555557 A6NDX4 124 aa8.1□□□□□ -1.11
SRP54-208ENST00000555557 CST7O76096 145 aa8.1□□□□□ -1.11
SRP54-208ENST00000555557 CNIH1O95406 144 aa8.1□□□□□ -1.11
SRP54-208ENST00000555557 COMPP49747 757 aaPredicted RBP8.1□□□□□ -1.11
SRP54-208ENST00000555557 RPL23AP62750 156 aaKnown RBP8.1□□□□□ -1.11
SRP54-208ENST00000555557 CX3CL1P78423 397 aa8.1□□□□□ -1.11
SRP54-208ENST00000555557 FLI1Q01543 452 aaPredicted RBP8.1□□□□□ -1.11
SRP54-208ENST00000555557 TMEM267Q0VDI3 215 aaPredicted RBP8.1□□□□□ -1.11
SRP54-208ENST00000555557 Q6YL49 198 aa8.1□□□□□ -1.11
SRP54-208ENST00000555557 ACOT7LQ6ZUV0 252 aa8.1□□□□□ -1.11
SRP54-208ENST00000555557 TMEM252Q8N6L7 170 aa8.1□□□□□ -1.11
SRP54-208ENST00000555557 SMIM8Q96KF7 97 aa8.1□□□□□ -1.11
SRP54-208ENST00000555557 DUX5Q96PT3 197 aa8.1□□□□□ -1.11
SRP54-208ENST00000555557 RASL11BQ9BPW5 248 aa8.1□□□□□ -1.11
SRP54-208ENST00000555557 PLEKHA3Q9HB20 300 aa8.1□□□□□ -1.11
SRP54-208ENST00000555557 LYRM2Q9NU23 88 aaPredicted RBP8.1□□□□□ -1.11
SRP54-208ENST00000555557 WSB1Q9Y6I7 421 aa8.1□□□□□ -1.11
SRP54-208ENST00000555557 HOXA3O43365 443 aaPredicted RBP8.09□□□□□ -1.11
SRP54-208ENST00000555557 AMY1AP04745 511 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms