RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 IFNA5P01569 189 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 IGKV1-5P01602 117 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 HBE1P02100 147 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 CD24P25063 80 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 HILS1P60008 231 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 RAB2AP61019 212 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 HBG1P69891 147 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 HBG2P69892 147 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 PRR20EP86478 221 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 PRR20CP86479 221 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 PRR20DP86480 221 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 PRR20BP86481 221 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 PRR20AP86496 221 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 DIAPH2-AS1Q14236 149 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 HLA-DRB5Q30154 266 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 ARSJQ5FYB0 599 aaPredicted RBP7.94□□□□□ -1.14
PSEN1-213ENST00000555386 OR10A7Q8NGE5 316 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 FAM213BQ8TBF2 198 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 JMJD8Q96S16 334 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 PARP12Q9H0J9 701 aaKnown RBP7.94□□□□□ -1.14
PSEN1-213ENST00000555386 SLC35B3Q9H1N7 401 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 LINC00574Q9H8X3 128 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 SMCO4Q9NRQ5 59 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 DPM3Q9P2X0 92 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 CACNG5Q9UF02 275 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 FBN1P35555 2871 aaKnown RBP7.94□□□□□ -1.14
PSEN1-213ENST00000555386 A0A087X0M5 115 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 TRAV1-1A0A0B4J248 108 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 A0A1B0GX30 115 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 C9JQL5 133 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 ST8SIA5O15466 376 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 CST7O76096 145 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 IGLV1-47P01700 117 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 PPT1P50897 306 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 ZNF134P52741 427 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 HTD2P86397 168 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 EIF4EBP1Q13541 118 aaPredicted RBP7.94□□□□□ -1.14
PSEN1-213ENST00000555386 MORN2Q502X0 79 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 CT45A1Q5HYN5 189 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 AKR1C8PQ5T2L2 129 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 Q6YL49 198 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 ZNF66Q6ZN08 573 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 LYG1Q8N1E2 194 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 BEND2Q8NDZ0 799 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 CT45A3Q8NHU0 189 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 SSMEM1Q8WWF3 244 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 RPEQ96AT9 228 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 RBMXL1Q96E39 390 aaKnown RBP7.94□□□□□ -1.14
PSEN1-213ENST00000555386 MALSU1Q96EH3 234 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 PSMG3Q9BT73 122 aaPredicted RBP7.94□□□□□ -1.14
PSEN1-213ENST00000555386 EIF5A2Q9GZV4 153 aaKnown RBP7.94□□□□□ -1.14
PSEN1-213ENST00000555386 TUBA4BQ9H853 241 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 KIAA1456Q9P272 454 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 TBL2Q9Y4P3 447 aaKnown RBP7.94□□□□□ -1.14
PSEN1-213ENST00000555386 AMMECR1Q9Y4X0 333 aaPredicted RBP7.94□□□□□ -1.14
PSEN1-213ENST00000555386 COL6A5A8TX70 2615 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 SCAF4O95104 1147 aaKnown RBP7.93□□□□□ -1.14
PSEN1-213ENST00000555386 LY86O95711 162 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 P0C879 139 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 CEACAM3P40198 252 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 IER3P46695 156 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 FHITP49789 147 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 RHEBQ15382 184 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 LRRC75BQ2VPJ9 315 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 TPTE2P1Q5T6R2 138 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 SAMD5Q5TGI4 173 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 MINOS1Q5TGZ0 78 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 TMEM88Q6PEY1 159 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 Q6ZRM9 215 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 MOB3BQ86TA1 216 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 TMEM219Q86XT9 240 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 CBLN2Q8IUK8 224 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 C15orf54Q8N8G6 183 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 SCGB1C1Q8TD33 95 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 HSD17B10Q99714 261 aaKnown RBP7.93□□□□□ -1.14
PSEN1-213ENST00000555386 ABHD14AQ9BUJ0 271 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 OR2D2Q9H210 308 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 PSENENQ9NZ42 101 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 JPT1Q9UK76 154 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 MINOS1-NBL1R4GNA1 71 aa7.93□□□□□ -1.14
PSEN1-213ENST00000555386 IGHV3-72A0A0B4J1Y9 119 aa7.92□□□□□ -1.14
PSEN1-213ENST00000555386 RBFOX3A6NFN3 312 aa7.92□□□□□ -1.14
PSEN1-213ENST00000555386 FOLR2P14207 255 aa7.92□□□□□ -1.14
PSEN1-213ENST00000555386 SERF2P84101 59 aa7.92□□□□□ -1.14
PSEN1-213ENST00000555386 KRTAP24-1Q3LI83 254 aa7.92□□□□□ -1.14
PSEN1-213ENST00000555386 SPSB3Q6PJ21 355 aa7.92□□□□□ -1.14
PSEN1-213ENST00000555386 TMEM217Q8N7C4 229 aa7.92□□□□□ -1.14
PSEN1-213ENST00000555386 CD300LFQ8TDQ1 290 aa7.92□□□□□ -1.14
PSEN1-213ENST00000555386 EDARADDQ8WWZ3 215 aa7.92□□□□□ -1.14
PSEN1-213ENST00000555386 HSPB7Q9UBY9 170 aa7.92□□□□□ -1.14
PSEN1-213ENST00000555386 PRELID3BQ9Y3B1 194 aa7.92□□□□□ -1.14
PSEN1-213ENST00000555386 FAM181BA6NEQ2 426 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 FAM90A9PA6NNJ1 464 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 LY6LH3BQJ8 138 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 TIMM23O14925 209 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 EREGO14944 169 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 RAB29O14966 203 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 YPEL1O60688 119 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 IL3RAP26951 378 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 UBE2KP61086 200 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms