RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 MYOD1P15172 320 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 RPA2P15927 270 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 ELLP55199 621 aaPredicted RBP8.97□□□□□ -0.97
VRK1-204ENST00000555351 RND3P61587 244 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 MRPS10P82664 201 aaKnown RBP8.97□□□□□ -0.97
VRK1-204ENST00000555351 SSBP1Q04837 148 aaKnown RBP8.97□□□□□ -0.97
VRK1-204ENST00000555351 DEFB114Q30KQ6 69 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 CLEC19AQ6UXS0 136 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 ADAMTSL5Q6ZMM2 481 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 HAPLN4Q86UW8 402 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 ZNF502Q8TBZ5 544 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 LSM10Q969L4 123 aaKnown RBP8.97□□□□□ -0.97
VRK1-204ENST00000555351 MARC2Q969Z3 335 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 TMEM56Q96MV1 263 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 RCHY1Q96PM5 261 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 BCL7BQ9BQE9 202 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 TMEM14BQ9NUH8 114 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 RABL2AQ9UBK7 228 aaPredicted RBP8.97□□□□□ -0.97
VRK1-204ENST00000555351 MTFP1Q9UDX5 166 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 RABL2BQ9UNT1 228 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 STAB2Q8WWQ8 2551 aa8.96□□□□□ -0.97
VRK1-204ENST00000555351 FAM25AB3EWG3 89 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 FAM25CB3EWG5 89 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 FAM25GB3EWG6 89 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 OR2C1O95371 312 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 IFNA6P05013 189 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 REG1AP05451 166 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 OR13C7P0DN81 318 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 FOLR2P14207 255 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 WT1-ASQ06250 92 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 RNASE10Q5GAN6 216 aaKnown RBP8.96□□□□□ -0.98
VRK1-204ENST00000555351 C19orf35Q6ZS72 473 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 GPR141Q7Z602 305 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 LHFPL1Q86WI0 220 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 NAA50Q9GZZ1 169 aaKnown RBP8.96□□□□□ -0.98
VRK1-204ENST00000555351 PALMDQ9NP74 551 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 EXTL2Q9UBQ6 330 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 OR51B2Q9Y5P1 312 aa8.96□□□□□ -0.98
VRK1-204ENST00000555351 F11RQ9Y624 299 aaKnown RBP8.96□□□□□ -0.98
VRK1-204ENST00000555351 MFSD2BA6NFX1 497 aa8.95□□□□□ -0.98
VRK1-204ENST00000555351 C15orf61A6NNL5 157 aa8.95□□□□□ -0.98
VRK1-204ENST00000555351 B3GALNT1O75752 331 aa8.95□□□□□ -0.98
VRK1-204ENST00000555351 CLEC3BP05452 202 aa8.95□□□□□ -0.98
VRK1-204ENST00000555351 CBLN1P23435 193 aa8.95□□□□□ -0.98
VRK1-204ENST00000555351 G6PCP35575 357 aa8.95□□□□□ -0.98
VRK1-204ENST00000555351 CD300EQ496F6 205 aaPredicted RBP8.95□□□□□ -0.98
VRK1-204ENST00000555351 PHLDA2Q53GA4 152 aa8.95□□□□□ -0.98
VRK1-204ENST00000555351 LCE2DQ5TA82 110 aaPredicted RBP8.95□□□□□ -0.98
VRK1-204ENST00000555351 SPSB3Q6PJ21 355 aa8.95□□□□□ -0.98
VRK1-204ENST00000555351 TBC1D26Q86UD7 250 aa8.95□□□□□ -0.98
VRK1-204ENST00000555351 OR10W1Q8NGF6 305 aa8.95□□□□□ -0.98
VRK1-204ENST00000555351 DYNLRB2Q8TF09 96 aa8.95□□□□□ -0.98
VRK1-204ENST00000555351 SEC22AQ96IW7 307 aa8.95□□□□□ -0.98
VRK1-204ENST00000555351 SLC2A8Q9NY64 477 aa8.95□□□□□ -0.98
VRK1-204ENST00000555351 KLK11Q9UBX7 282 aa8.95□□□□□ -0.98
VRK1-204ENST00000555351 TRAV25A0A0B4J276 109 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 TMEM213A2RRL7 107 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 IZUMO1RA6ND01 250 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 ZNF785A8K8V0 405 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 GABARAPH6UMI1 98 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 ATG12O94817 140 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 HLA-AP01891 365 aaKnown RBP8.94□□□□□ -0.98
VRK1-204ENST00000555351 CD74P04233 296 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 C8orf88P0DMB2 117 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 PLET1Q6UQ28 207 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 H2BFWTQ7Z2G1 175 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 TMEM229BQ8NBD8 167 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 OR1P1Q8NH06 330 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 OR52I2Q8NH67 350 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 RAB2BQ8WUD1 216 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 BSCL2Q96G97 398 aaPredicted RBP8.94□□□□□ -0.98
VRK1-204ENST00000555351 CITED4Q96RK1 184 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 ABHD1Q96SE0 405 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 ZNF436Q9C0F3 470 aaPredicted RBP8.94□□□□□ -0.98
VRK1-204ENST00000555351 GAR1Q9NY12 217 aaKnown RBP8.94□□□□□ -0.98
VRK1-204ENST00000555351 MRPL27Q9P0M9 148 aaKnown RBP8.94□□□□□ -0.98
VRK1-204ENST00000555351 UFC1Q9Y3C8 167 aa8.94□□□□□ -0.98
VRK1-204ENST00000555351 M0QYG6 137 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 CTDSPLO15194 276 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 TGOLN2O43493 480 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 IGHV3-23P01764 117 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 CD3DP04234 171 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 FCGR2BP31994 310 aaPredicted RBP8.93□□□□□ -0.98
VRK1-204ENST00000555351 GPR183P32249 361 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 TMBIM6P55061 237 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 TAS2R19P59542 299 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 ANKRD55Q3KP44 614 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 SLC25A24Q6NUK1 477 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 LINC00322Q6ZN03 302 aaPredicted RBP8.93□□□□□ -0.98
VRK1-204ENST00000555351 ZNF114Q8NC26 417 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 OR4A16Q8NH70 328 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 TERB2Q8NHR7 220 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 ZFAND1Q8TCF1 268 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 NEURL2Q9BR09 285 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 SPATA25Q9BR10 227 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 MIXL1Q9H2W2 232 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 TUBA4BQ9H853 241 aa8.93□□□□□ -0.98
VRK1-204ENST00000555351 CCDC59Q9P031 241 aaKnown RBP8.93□□□□□ -0.98
VRK1-204ENST00000555351 ZNF320A2RRD8 509 aa8.92□□□□□ -0.98
VRK1-204ENST00000555351 INS-IGF2F8WCM5 200 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms