RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ELANEP08246 267 aa9.93□□□□□ -0.82
SYNE2-219ENST00000555323 TRAPPC2P0DI81 140 aa9.93□□□□□ -0.82
SYNE2-219ENST00000555323 TRAPPC2BP0DI82 140 aa9.93□□□□□ -0.82
SYNE2-219ENST00000555323 PSMB8P28062 276 aa9.93□□□□□ -0.82
SYNE2-219ENST00000555323 CD83Q01151 205 aa9.93□□□□□ -0.82
SYNE2-219ENST00000555323 GGNBP1Q5YKI7 109 aa9.93□□□□□ -0.82
SYNE2-219ENST00000555323 UNQ5815/PRO19632Q6UWF5 114 aa9.93□□□□□ -0.82
SYNE2-219ENST00000555323 C12orf54Q6X4T0 127 aa9.93□□□□□ -0.82
SYNE2-219ENST00000555323 ZNF329Q86UD4 541 aa9.93□□□□□ -0.82
SYNE2-219ENST00000555323 C12orf45Q8N5I9 185 aaPredicted RBP9.93□□□□□ -0.82
SYNE2-219ENST00000555323 OR5M8Q8NGP6 311 aa9.93□□□□□ -0.82
SYNE2-219ENST00000555323 RNASE11Q8TAA1 199 aaKnown RBP9.93□□□□□ -0.82
SYNE2-219ENST00000555323 QTRT1Q9BXR0 403 aaKnown RBP9.93□□□□□ -0.82
SYNE2-219ENST00000555323 CACNG5Q9UF02 275 aa9.93□□□□□ -0.82
SYNE2-219ENST00000555323 IGLC7A0M8Q6 106 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 C7orf66A4D0T2 115 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 NPIPB5A8MRT5 1133 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 H3BUA1 57 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 ST8SIA3O43173 380 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 SOX15O60248 233 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 ADAP1O75689 374 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 OPN1MWP04001 364 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 HOXB5P09067 269 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 SULT1A3P0DMM9 295 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 SULT1A4P0DMN0 295 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 OPN1MW2P0DN77 364 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 OPN1MW3P0DN78 364 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 PRCDQ00LT1 54 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 FOXE3Q13461 319 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 SMCO1Q147U7 214 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 ECSCRQ19T08 205 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 TCTEX1D4Q5JR98 221 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 C10orf99Q6UWK7 81 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 FAM110DQ8TAY7 271 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-219ENST00000555323 ABHD5Q8WTS1 349 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 FYTTD1Q96QD9 318 aaKnown RBP9.92□□□□□ -0.82
SYNE2-219ENST00000555323 CITED1Q99966 193 aa9.92□□□□□ -0.82
SYNE2-219ENST00000555323 A0A1W2PN81 502 aa9.91□□□□□ -0.82
SYNE2-219ENST00000555323 HMX3A6NHT5 357 aa9.91□□□□□ -0.82
SYNE2-219ENST00000555323 RBMXL2O75526 392 aaKnown RBP9.91□□□□□ -0.82
SYNE2-219ENST00000555323 IFNA21P01568 189 aa9.91□□□□□ -0.82
SYNE2-219ENST00000555323 CTRB1P17538 263 aa9.91□□□□□ -0.82
SYNE2-219ENST00000555323 PSMB6P28072 239 aa9.91□□□□□ -0.82
SYNE2-219ENST00000555323 CHRNA7P36544 502 aa9.91□□□□□ -0.82
SYNE2-219ENST00000555323 SPCS3P61009 180 aa9.91□□□□□ -0.82
SYNE2-219ENST00000555323 CTRB2Q6GPI1 263 aa9.91□□□□□ -0.82
SYNE2-219ENST00000555323 SPATA3Q8NHX4 192 aa9.91□□□□□ -0.82
SYNE2-219ENST00000555323 MYOZ3Q8TDC0 251 aa9.91□□□□□ -0.82
SYNE2-219ENST00000555323 ZFP57Q9NU63 452 aa9.91□□□□□ -0.82
SYNE2-219ENST00000555323 MPTX1A8MV57 137 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 FAM90A26D6RGX4 464 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 FBXO24O75426 580 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 IFNA17P01571 189 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 CD28P10747 220 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 RAB9AP51151 201 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 WT1-ASQ06250 92 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 KIAA0141Q14154 515 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-219ENST00000555323 TATDN3Q17R31 274 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 C3orf56Q8N813 242 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 OR5T1Q8NG75 326 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 OR10W1Q8NGF6 305 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 OR4X2Q8NGF9 303 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 PDCD10Q9BUL8 212 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 KLK15Q9H2R5 256 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 SLA2Q9H6Q3 261 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 HSPB7Q9UBY9 170 aa9.9□□□□□ -0.82
SYNE2-219ENST00000555323 TRBV9A0A0B4J1U6 114 aa9.89□□□□□ -0.83
SYNE2-219ENST00000555323 APELAP0DMC3 54 aa9.89□□□□□ -0.83
SYNE2-219ENST00000555323 AREGP15514 252 aa9.89□□□□□ -0.83
SYNE2-219ENST00000555323 ID3Q02535 119 aa9.89□□□□□ -0.83
SYNE2-219ENST00000555323 TNFRSF9Q07011 255 aa9.89□□□□□ -0.83
SYNE2-219ENST00000555323 SRSF4Q08170 494 aaKnown RBP9.89□□□□□ -0.83
SYNE2-219ENST00000555323 CXorf66Q5JRM2 361 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-219ENST00000555323 SHISA2Q6UWI4 295 aa9.89□□□□□ -0.83
SYNE2-219ENST00000555323 MRPL41Q8IXM3 137 aaKnown RBP9.89□□□□□ -0.83
SYNE2-219ENST00000555323 OR2C3Q8N628 320 aa9.89□□□□□ -0.83
SYNE2-219ENST00000555323 OR10C1Q96KK4 312 aa9.89□□□□□ -0.83
SYNE2-219ENST00000555323 FANCD2OSQ96PS1 177 aa9.89□□□□□ -0.83
SYNE2-219ENST00000555323 COL6A5A8TX70 2615 aa9.88□□□□□ -0.83
SYNE2-219ENST00000555323 OR13C7P0DN81 318 aa9.88□□□□□ -0.83
SYNE2-219ENST00000555323 CDX1P47902 265 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-219ENST00000555323 ERHP84090 104 aaKnown RBP9.88□□□□□ -0.83
SYNE2-219ENST00000555323 IL15RAQ13261 267 aa9.88□□□□□ -0.83
SYNE2-219ENST00000555323 PVRIGQ6DKI7 326 aa9.88□□□□□ -0.83
SYNE2-219ENST00000555323 TMEM65Q6PI78 240 aa9.88□□□□□ -0.83
SYNE2-219ENST00000555323 ZNF491Q8N8L2 437 aa9.88□□□□□ -0.83
SYNE2-219ENST00000555323 UXS1Q8NBZ7 420 aa9.88□□□□□ -0.83
SYNE2-219ENST00000555323 ZNF114Q8NC26 417 aa9.88□□□□□ -0.83
SYNE2-219ENST00000555323 OR4D5Q8NGN0 318 aa9.88□□□□□ -0.83
SYNE2-219ENST00000555323 OR1S1Q8NH92 325 aa9.88□□□□□ -0.83
SYNE2-219ENST00000555323 UBE2E2Q96LR5 201 aa9.88□□□□□ -0.83
SYNE2-219ENST00000555323 CITED2Q99967 270 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-219ENST00000555323 HINT2Q9BX68 163 aa9.88□□□□□ -0.83
SYNE2-219ENST00000555323 PLEKHA3Q9HB20 300 aa9.88□□□□□ -0.83
SYNE2-219ENST00000555323 TET2Q6N021 2002 aaPredicted RBP9.87□□□□□ -0.83
SYNE2-219ENST00000555323 IGLV11-55A0A075B6I3 123 aa9.87□□□□□ -0.83
SYNE2-219ENST00000555323 TCRBV4S1A1TA0A5B7 111 aa9.87□□□□□ -0.83
SYNE2-219ENST00000555323 RPLP1P05386 114 aaKnown RBP9.87□□□□□ -0.83
SYNE2-219ENST00000555323 PF4V1P10720 104 aa9.87□□□□□ -0.83
SYNE2-219ENST00000555323 HIST1H1BP16401 226 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms