RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 R3HDM4Q96D70 268 aa14.15□□□□□ -0.14
SHOX-204ENST00000554971 LPAR2Q9HBW0 351 aa14.15□□□□□ -0.14
SHOX-204ENST00000554971 GNG12Q9UBI6 72 aa14.15□□□□□ -0.14
SHOX-204ENST00000554971 LINC00473A8K010 186 aa14.14□□□□□ -0.15
SHOX-204ENST00000554971 DVL1O14640 695 aa14.14□□□□□ -0.15
SHOX-204ENST00000554971 MDKP21741 143 aaPredicted RBP14.14□□□□□ -0.15
SHOX-204ENST00000554971 MEOX2P50222 304 aa14.14□□□□□ -0.15
SHOX-204ENST00000554971 SPCS3P61009 180 aa14.14□□□□□ -0.15
SHOX-204ENST00000554971 WDR25Q64LD2 544 aaPredicted RBP14.14□□□□□ -0.15
SHOX-204ENST00000554971 LHX4Q969G2 390 aa14.14□□□□□ -0.15
SHOX-204ENST00000554971 CTDSP1Q9GZU7 261 aa14.14□□□□□ -0.15
SHOX-204ENST00000554971 VSIRQ9H7M9 311 aa14.14□□□□□ -0.15
SHOX-204ENST00000554971 CEBPZOSA8MTT3 80 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 ST8SIA5O15466 376 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 MPDU1O75352 247 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 RAB11AP62491 216 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 LCN2P80188 198 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 BTNL3Q6UXE8 466 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 IQCF2Q8IXL9 164 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 OR8B3Q8NGG8 313 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 RFESDQ8TAC1 157 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 OR8B2Q96RD0 313 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 ACTR3CQ9C0K3 210 aaPredicted RBP14.13□□□□□ -0.15
SHOX-204ENST00000554971 CLN8Q9UBY8 286 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 hCG_1809904A0A1W2PP81 198 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 A0A1W2PR64 198 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 A0A1W2PRV1 198 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 ZFP92A6NM28 416 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 TMEM250H0YL14 139 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 CGB3P0DN86 165 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 CGB7P0DN87 165 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 LOXL3P58215 753 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 ERVK-16P61578 105 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 PAX2Q02962 417 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 EDDM3AQ14507 147 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 OR2B11Q5JQS5 317 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 RPP25LQ8N5L8 163 aaKnown RBP14.13□□□□□ -0.15
SHOX-204ENST00000554971 OR13D1Q8NGV5 346 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 C12orf57Q99622 126 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 SSBP3Q9BWW4 388 aaPredicted RBP14.13□□□□□ -0.15
SHOX-204ENST00000554971 MANBALQ9NQG1 85 aa14.13□□□□□ -0.15
SHOX-204ENST00000554971 JMJD1CQ15652 2540 aa14.12□□□□□ -0.15
SHOX-204ENST00000554971 AP4M1O00189 453 aa14.12□□□□□ -0.15
SHOX-204ENST00000554971 CYB5BO43169 146 aa14.12□□□□□ -0.15
SHOX-204ENST00000554971 RBMXL2O75526 392 aaKnown RBP14.12□□□□□ -0.15
SHOX-204ENST00000554971 SMIM6P0DI80 62 aa14.12□□□□□ -0.15
SHOX-204ENST00000554971 FOSL1P15407 271 aa14.12□□□□□ -0.15
SHOX-204ENST00000554971 FGF7P21781 194 aa14.12□□□□□ -0.15
SHOX-204ENST00000554971 CEBPGP53567 150 aa14.12□□□□□ -0.15
SHOX-204ENST00000554971 NCR3LG1Q68D85 454 aa14.12□□□□□ -0.15
SHOX-204ENST00000554971 TPRX1Q8N7U7 411 aa14.12□□□□□ -0.15
SHOX-204ENST00000554971 FAM234AQ9H0X4 552 aa14.12□□□□□ -0.15
SHOX-204ENST00000554971 SDF2L1Q9HCN8 221 aa14.12□□□□□ -0.15
SHOX-204ENST00000554971 IGHV3-43A0A0B4J1X8 118 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 B4DSR2 109 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 C22orf46C9J442 243 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 S100A9P06702 114 aaKnown RBP14.11□□□□□ -0.15
SHOX-204ENST00000554971 MSMBP08118 114 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 FBP1P09467 338 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 IGHV3-43DP0DP04 118 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 NQO2P16083 231 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 PSMB3P49720 205 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 RND2P52198 227 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 ELOBQ15370 118 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 LINC01356Q8N9X3 169 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 ADTRPQ96IZ2 230 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 GSX1Q9H4S2 264 aaPredicted RBP14.11□□□□□ -0.15
SHOX-204ENST00000554971 POLR3KQ9Y2Y1 108 aaPredicted RBP14.11□□□□□ -0.15
SHOX-204ENST00000554971 LY6G6DO95868 133 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 MEF2BQ02080 365 aaPredicted RBP14.11□□□□□ -0.15
SHOX-204ENST00000554971 FAM53AQ6NSI3 398 aaPredicted RBP14.11□□□□□ -0.15
SHOX-204ENST00000554971 OR10G9Q8NGN4 311 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 OR10G7Q8NGN6 311 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 OR4A16Q8NH70 328 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 S1PR3Q99500 378 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 NPCDR1Q9BY65 106 aa14.11□□□□□ -0.15
SHOX-204ENST00000554971 SLC25A10Q9UBX3 287 aaPredicted RBP14.11□□□□□ -0.15
SHOX-204ENST00000554971 NKX6-3A6NJ46 265 aa14.1□□□□□ -0.15
SHOX-204ENST00000554971 CLDN34H7C241 214 aa14.1□□□□□ -0.15
SHOX-204ENST00000554971 PROP1O75360 226 aa14.1□□□□□ -0.15
SHOX-204ENST00000554971 EIF3GO75821 320 aaKnown RBP eCLIP14.1□□□□□ -0.15
SHOX-204ENST00000554971 ELLP55199 621 aaPredicted RBP14.1□□□□□ -0.15
SHOX-204ENST00000554971 ACOT6Q3I5F7 207 aaPredicted RBP14.1□□□□□ -0.15
SHOX-204ENST00000554971 LINC00574Q9H8X3 128 aa14.1□□□□□ -0.15
SHOX-204ENST00000554971 CALYQ9NYX4 217 aa14.1□□□□□ -0.15
SHOX-204ENST00000554971 WDR83OSQ9Y284 106 aa14.1□□□□□ -0.15
SHOX-204ENST00000554971 FCGR3BO75015 233 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 TGFAP01135 160 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 CYB5R2Q6BCY4 276 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 ACSM6Q6P461 480 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 SSX7Q7RTT5 188 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 OR4S2Q8NH73 311 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 DCTN5Q9BTE1 182 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 IFI27L2Q9H2X8 130 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 NAT8Q9UHE5 227 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 KBTBD11-OT1A0A1B0GTJ5 212 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 SMCO3A2RU48 225 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 C15orf62A8K5M9 175 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 M0R1X1 148 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 NDUFB3O43676 98 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms