RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 CXCL12P48061 93 aa13.01□□□□□ -0.33
SYNE3-203ENST00000554873 K7EP34 96 aa13.01□□□□□ -0.33
SYNE3-203ENST00000554873 STAG3L2P0CL84 134 aa13.01□□□□□ -0.33
SYNE3-203ENST00000554873 STAG3L3P0CL85 134 aa13.01□□□□□ -0.33
SYNE3-203ENST00000554873 SEC11AP67812 179 aa13.01□□□□□ -0.33
SYNE3-203ENST00000554873 OR5A2Q8NGI9 324 aa13.01□□□□□ -0.33
SYNE3-203ENST00000554873 TMEM45BQ96B21 275 aa13.01□□□□□ -0.33
SYNE3-203ENST00000554873 AP1S3Q96PC3 154 aa13.01□□□□□ -0.33
SYNE3-203ENST00000554873 SIGMAR1Q99720 223 aa13.01□□□□□ -0.33
SYNE3-203ENST00000554873 SCRT2Q9NQ03 307 aa13.01□□□□□ -0.33
SYNE3-203ENST00000554873 YTHDF2Q9Y5A9 579 aaKnown RBP13.01□□□□□ -0.33
SYNE3-203ENST00000554873 hDV102S1A0JD36 115 aa13□□□□□ -0.33
SYNE3-203ENST00000554873 ZNF16P17020 682 aaPredicted RBP13□□□□□ -0.33
SYNE3-203ENST00000554873 C9orf135Q5VTT2 229 aa13□□□□□ -0.33
SYNE3-203ENST00000554873 FGFRL1Q8N441 504 aa13□□□□□ -0.33
SYNE3-203ENST00000554873 KIR3DL3Q8N743 410 aa13□□□□□ -0.33
SYNE3-203ENST00000554873 GP6Q9HCN6 339 aa13□□□□□ -0.33
SYNE3-203ENST00000554873 OSTCQ9NRP0 149 aa13□□□□□ -0.33
SYNE3-203ENST00000554873 PILRBQ9UKJ0 227 aa13□□□□□ -0.33
SYNE3-203ENST00000554873 KLF5Q13887 457 aaPredicted RBP13□□□□□ -0.33
SYNE3-203ENST00000554873 CEACAM21Q3KPI0 293 aa13□□□□□ -0.33
SYNE3-203ENST00000554873 PRDM6Q9NQX0 595 aa13□□□□□ -0.33
SYNE3-203ENST00000554873 PLSCR4Q9NRQ2 329 aa13□□□□□ -0.33
SYNE3-203ENST00000554873 PPP1R3CQ9UQK1 317 aa13□□□□□ -0.33
SYNE3-203ENST00000554873 VPS13AQ96RL7 3174 aa13□□□□□ -0.33
SYNE3-203ENST00000554873 A0A087X0K7 114 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 A0A096LPE4 126 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 A0A1W2PPZ6 126 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 C3orf80F5H4A9 247 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 SYNGR1O43759 233 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 SPINK2P20155 84 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 USF1P22415 310 aaPredicted RBP12.99□□□□□ -0.33
SYNE3-203ENST00000554873 GPR183P32249 361 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 TCL1AP56279 114 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 EDDM3BP56851 147 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 SLAQ13239 276 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 GABRA6Q16445 453 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 LYSMD4Q5XG99 296 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 ZNF48Q96MX3 618 aaPredicted RBP12.99□□□□□ -0.33
SYNE3-203ENST00000554873 PRRG4Q9BZD6 226 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 TNFRSF19Q9NS68 423 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 IGLV2-14P01704 120 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 RNASEKQ6P5S7 137 aaKnown RBP12.99□□□□□ -0.33
SYNE3-203ENST00000554873 ZNF841Q6ZN19 808 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 SPACA3Q8IXA5 215 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 MKXQ8IYA7 352 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 SAP30LQ9HAJ7 183 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 DEPPQ9NTK1 212 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 TECRQ9NZ01 308 aaKnown RBP12.99□□□□□ -0.33
SYNE3-203ENST00000554873 WDR83OSQ9Y284 106 aa12.99□□□□□ -0.33
SYNE3-203ENST00000554873 C5orf49A4QMS7 147 aa12.98□□□□□ -0.33
SYNE3-203ENST00000554873 C9orf118A6NHY6 69 aa12.98□□□□□ -0.33
SYNE3-203ENST00000554873 PLP1P60201 277 aa12.98□□□□□ -0.33
SYNE3-203ENST00000554873 RPS16P62249 146 aaKnown RBP12.98□□□□□ -0.33
SYNE3-203ENST00000554873 ZNF488Q96MN9 340 aa12.98□□□□□ -0.33
SYNE3-203ENST00000554873 GTSF1LQ9H1H1 148 aa12.98□□□□□ -0.33
SYNE3-203ENST00000554873 ZNF331Q9NQX6 463 aaPredicted RBP12.98□□□□□ -0.33
SYNE3-203ENST00000554873 FRYLO94915 3013 aa12.98□□□□□ -0.33
SYNE3-203ENST00000554873 RRHO14718 337 aa12.98□□□□□ -0.33
SYNE3-203ENST00000554873 SMAGPQ0VAQ4 97 aa12.98□□□□□ -0.33
SYNE3-203ENST00000554873 Q0VFX4 171 aa12.98□□□□□ -0.33
SYNE3-203ENST00000554873 WDR82Q6UXN9 313 aa12.98□□□□□ -0.33
SYNE3-203ENST00000554873 SMIM27A0A1W2PRY6 76 aa12.98□□□□□ -0.33
SYNE3-203ENST00000554873 GNG4P50150 75 aa12.98□□□□□ -0.33
SYNE3-203ENST00000554873 BHLHA15Q7RTS1 189 aaPredicted RBP12.98□□□□□ -0.33
SYNE3-203ENST00000554873 MRPL21Q7Z2W9 205 aaKnown RBP12.98□□□□□ -0.33
SYNE3-203ENST00000554873 RNASE7Q9H1E1 156 aaKnown RBP12.98□□□□□ -0.33
SYNE3-203ENST00000554873 FREM2Q5SZK8 3169 aa12.98□□□□□ -0.33
SYNE3-203ENST00000554873 PINLYPA6NC86 204 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 NGFP01138 241 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 CEACAM3P40198 252 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 FOLR3P41439 243 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 FOXG1P55316 489 aaPredicted RBP12.97□□□□□ -0.33
SYNE3-203ENST00000554873 OR2T6Q8NHC8 308 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 NPFFR1Q9GZQ6 430 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 TMEM191AQ9H0A3 160 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 MS4A6AQ9H2W1 248 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 ZNF835Q9Y2P0 537 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 IZUMO1RA6ND01 250 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 ZNF503-AS2A6NEH8 195 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 H3BRM9 83 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 MRPL33O75394 65 aaKnown RBP12.97□□□□□ -0.33
SYNE3-203ENST00000554873 RAB9AP51151 201 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 FXYD3Q14802 87 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 CENPWQ5EE01 88 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 JMJD8Q96S16 334 aa12.97□□□□□ -0.33
SYNE3-203ENST00000554873 LRRC30A6NM36 301 aa12.96□□□□□ -0.33
SYNE3-203ENST00000554873 SYS1-DBNDD2H3BUS1 97 aa12.96□□□□□ -0.33
SYNE3-203ENST00000554873 ZG16O60844 167 aa12.96□□□□□ -0.33
SYNE3-203ENST00000554873 CLDN14O95500 239 aa12.96□□□□□ -0.33
SYNE3-203ENST00000554873 MC5RP33032 325 aa12.96□□□□□ -0.33
SYNE3-203ENST00000554873 RASL11AQ6T310 242 aa12.96□□□□□ -0.33
SYNE3-203ENST00000554873 OR2K2Q8NGT1 345 aa12.96□□□□□ -0.33
SYNE3-203ENST00000554873 WIPF2Q8TF74 440 aaPredicted RBP12.96□□□□□ -0.33
SYNE3-203ENST00000554873 TRAV24A0A0B4J272 114 aa12.96□□□□□ -0.34
SYNE3-203ENST00000554873 ISLRO14498 428 aa12.96□□□□□ -0.34
SYNE3-203ENST00000554873 GCHFRP30047 84 aa12.96□□□□□ -0.34
SYNE3-203ENST00000554873 NRN1LQ496H8 165 aa12.96□□□□□ -0.34
SYNE3-203ENST00000554873 DOLPP1Q86YN1 238 aa12.96□□□□□ -0.34
SYNE3-203ENST00000554873 OR5A1Q8NGJ0 315 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms