RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 SULT1C2O00338 296 aa17.87■□□□□ 0.45
FOXA1-204ENST00000554607 CMC4P56277 68 aaPredicted RBP17.87■□□□□ 0.45
FOXA1-204ENST00000554607 SLC25A24Q6NUK1 477 aa17.87■□□□□ 0.45
FOXA1-204ENST00000554607 DMBX1Q8NFW5 382 aa17.87■□□□□ 0.45
FOXA1-204ENST00000554607 CD300LFQ8TDQ1 290 aa17.87■□□□□ 0.45
FOXA1-204ENST00000554607 C20orf24Q9BUV8 137 aa17.87■□□□□ 0.45
FOXA1-204ENST00000554607 MFFQ9GZY8 342 aa17.87■□□□□ 0.45
FOXA1-204ENST00000554607 SERPINE2P07093 398 aa17.86■□□□□ 0.45
FOXA1-204ENST00000554607 TRAPPC2P0DI81 140 aa17.86■□□□□ 0.45
FOXA1-204ENST00000554607 TRAPPC2BP0DI82 140 aa17.86■□□□□ 0.45
FOXA1-204ENST00000554607 BEST4Q8NFU0 473 aa17.86■□□□□ 0.45
FOXA1-204ENST00000554607 OR10W1Q8NGF6 305 aa17.86■□□□□ 0.45
FOXA1-204ENST00000554607 OR5B3Q8NH48 314 aa17.86■□□□□ 0.45
FOXA1-204ENST00000554607 GATAD1Q8WUU5 269 aa17.86■□□□□ 0.45
FOXA1-204ENST00000554607 SLC5A7Q9GZV3 580 aa17.86■□□□□ 0.45
FOXA1-204ENST00000554607 CSTL1Q9H114 145 aa17.86■□□□□ 0.45
FOXA1-204ENST00000554607 PLEKHA2Q9HB19 425 aa17.86■□□□□ 0.45
FOXA1-204ENST00000554607 TMEM140Q9NV12 185 aa17.86■□□□□ 0.45
FOXA1-204ENST00000554607 BLOC1S6Q9UL45 172 aa17.86■□□□□ 0.45
FOXA1-204ENST00000554607 SMIM30A4D0T7 59 aa17.85■□□□□ 0.45
FOXA1-204ENST00000554607 PPYP01298 95 aa17.85■□□□□ 0.45
FOXA1-204ENST00000554607 CTSDP07339 412 aaPredicted RBP17.85■□□□□ 0.45
FOXA1-204ENST00000554607 OR13C7P0DN81 318 aa17.85■□□□□ 0.45
FOXA1-204ENST00000554607 C21orf62Q9NYP8 219 aa17.85■□□□□ 0.45
FOXA1-204ENST00000554607 MPTX1A8MV57 137 aa17.84■□□□□ 0.45
FOXA1-204ENST00000554607 S1PR2O95136 353 aa17.84■□□□□ 0.45
FOXA1-204ENST00000554607 IFNA4P05014 189 aa17.84■□□□□ 0.45
FOXA1-204ENST00000554607 FCGR2BP31994 310 aaPredicted RBP17.84■□□□□ 0.45
FOXA1-204ENST00000554607 TPRA1Q86W33 373 aa17.84■□□□□ 0.45
FOXA1-204ENST00000554607 RARRES2Q99969 163 aa17.84■□□□□ 0.45
FOXA1-204ENST00000554607 C15orf62A8K5M9 175 aa17.83■□□□□ 0.44
FOXA1-204ENST00000554607 HOGA1Q86XE5 327 aa17.83■□□□□ 0.44
FOXA1-204ENST00000554607 OR1L8Q8NGR8 309 aa17.83■□□□□ 0.44
FOXA1-204ENST00000554607 C11orf45Q8TAV5 145 aa17.83■□□□□ 0.44
FOXA1-204ENST00000554607 COMMD9Q9P000 198 aa17.83■□□□□ 0.44
FOXA1-204ENST00000554607 DAPK2Q9UIK4 370 aa17.83■□□□□ 0.44
FOXA1-204ENST00000554607 TEX50A0A1B0GTY4 177 aa17.82■□□□□ 0.44
FOXA1-204ENST00000554607 FGF9P31371 208 aaPredicted RBP17.82■□□□□ 0.44
FOXA1-204ENST00000554607 ERVK-16P61578 105 aa17.82■□□□□ 0.44
FOXA1-204ENST00000554607 WT1-ASQ06250 92 aa17.82■□□□□ 0.44
FOXA1-204ENST00000554607 RBMS2Q15434 407 aaKnown RBP17.82■□□□□ 0.44
FOXA1-204ENST00000554607 ZNF773Q6PK81 442 aa17.82■□□□□ 0.44
FOXA1-204ENST00000554607 APRG1Q8IVJ8 170 aa17.82■□□□□ 0.44
FOXA1-204ENST00000554607 SCARB1Q8WTV0 552 aa17.82■□□□□ 0.44
FOXA1-204ENST00000554607 CHRDL1Q9BU40 450 aa17.82■□□□□ 0.44
FOXA1-204ENST00000554607 RHBDL2Q9NX52 303 aa17.82■□□□□ 0.44
FOXA1-204ENST00000554607 SMPXQ9UHP9 88 aa17.82■□□□□ 0.44
FOXA1-204ENST00000554607 F11RQ9Y624 299 aaKnown RBP17.82■□□□□ 0.44
FOXA1-204ENST00000554607 ZNF207O43670 478 aaKnown RBP17.81■□□□□ 0.44
FOXA1-204ENST00000554607 PTHLHP12272 177 aa17.81■□□□□ 0.44
FOXA1-204ENST00000554607 TCTAP57738 103 aa17.81■□□□□ 0.44
FOXA1-204ENST00000554607 AADACL3Q5VUY0 350 aa17.81■□□□□ 0.44
FOXA1-204ENST00000554607 GVQW1Q8N7I0 195 aa17.81■□□□□ 0.44
FOXA1-204ENST00000554607 OR51H1Q8NH63 302 aa17.81■□□□□ 0.44
FOXA1-204ENST00000554607 LGALS14Q8TCE9 139 aa17.81■□□□□ 0.44
FOXA1-204ENST00000554607 NRG4Q8WWG1 115 aa17.81■□□□□ 0.44
FOXA1-204ENST00000554607 BORCS5Q969J3 196 aa17.81■□□□□ 0.44
FOXA1-204ENST00000554607 LSM10Q969L4 123 aaKnown RBP17.81■□□□□ 0.44
FOXA1-204ENST00000554607 C11orf68Q9H3H3 251 aaKnown RBP17.81■□□□□ 0.44
FOXA1-204ENST00000554607 IGHV3OR16-8A0A075B7F1 116 aa17.8■□□□□ 0.44
FOXA1-204ENST00000554607 ADMP35318 185 aa17.8■□□□□ 0.44
FOXA1-204ENST00000554607 FXYD4P59646 89 aa17.8■□□□□ 0.44
FOXA1-204ENST00000554607 NANOS2P60321 138 aaKnown RBP17.8■□□□□ 0.44
FOXA1-204ENST00000554607 Q56UQ5 140 aa17.8■□□□□ 0.44
FOXA1-204ENST00000554607 ZNF818PQ6ZRF7 136 aa17.8■□□□□ 0.44
FOXA1-204ENST00000554607 UBAC2Q8NBM4 344 aa17.8■□□□□ 0.44
FOXA1-204ENST00000554607 GIMAP1Q8WWP7 306 aa17.8■□□□□ 0.44
FOXA1-204ENST00000554607 NDUFA4L2Q9NRX3 87 aa17.8■□□□□ 0.44
FOXA1-204ENST00000554607 TXNL4BQ9NX01 149 aaKnown RBP17.8■□□□□ 0.44
FOXA1-204ENST00000554607 FBXL17Q9UF56 701 aa17.8■□□□□ 0.44
FOXA1-204ENST00000554607 RRP15Q9Y3B9 282 aaKnown RBP17.8■□□□□ 0.44
FOXA1-204ENST00000554607 HECTD4Q9Y4D8 3996 aa17.8■□□□□ 0.44
FOXA1-204ENST00000554607 TRAV18A0A075B6X5 111 aa17.79■□□□□ 0.44
FOXA1-204ENST00000554607 IGHV3-21A0A0B4J1V1 117 aa17.79■□□□□ 0.44
FOXA1-204ENST00000554607 RELQ04864 619 aaPredicted RBP17.79■□□□□ 0.44
FOXA1-204ENST00000554607 SFXN4Q6P4A7 337 aa17.79■□□□□ 0.44
FOXA1-204ENST00000554607 OR11H2Q8NH07 326 aa17.79■□□□□ 0.44
FOXA1-204ENST00000554607 C2CD4CQ8TF44 421 aa17.79■□□□□ 0.44
FOXA1-204ENST00000554607 RNF2Q99496 336 aa17.79■□□□□ 0.44
FOXA1-204ENST00000554607 HINT2Q9BX68 163 aa17.79■□□□□ 0.44
FOXA1-204ENST00000554607 ETV7Q9Y603 341 aa17.79■□□□□ 0.44
FOXA1-204ENST00000554607 PCLOQ9Y6V0 5065 aa17.79■□□□□ 0.44
FOXA1-204ENST00000554607 F8W735 103 aaPredicted RBP17.78■□□□□ 0.44
FOXA1-204ENST00000554607 CHEK1O14757 476 aa17.78■□□□□ 0.44
FOXA1-204ENST00000554607 MRPS14O60783 128 aaKnown RBP17.78■□□□□ 0.44
FOXA1-204ENST00000554607 MFAP2P55001 183 aa17.78■□□□□ 0.44
FOXA1-204ENST00000554607 SCAND1P57086 179 aa17.78■□□□□ 0.44
FOXA1-204ENST00000554607 TMEM116Q8NCL8 245 aa17.78■□□□□ 0.44
FOXA1-204ENST00000554607 CMTM3Q96MX0 182 aa17.78■□□□□ 0.44
FOXA1-204ENST00000554607 RHPN1-AS1Q9BWJ2 59 aa17.78■□□□□ 0.44
FOXA1-204ENST00000554607 VPS13DQ5THJ4 4388 aa17.78■□□□□ 0.44
FOXA1-204ENST00000554607 A0A0A6YYH2 397 aa17.77■□□□□ 0.44
FOXA1-204ENST00000554607 IGHV7-4-1A0A0J9YVY3 117 aa17.77■□□□□ 0.44
FOXA1-204ENST00000554607 A6NJ64 397 aa17.77■□□□□ 0.44
FOXA1-204ENST00000554607 MARCH11A6NNE9 402 aa17.77■□□□□ 0.44
FOXA1-204ENST00000554607 K7EIM0 57 aa17.77■□□□□ 0.44
FOXA1-204ENST00000554607 CADM3Q8N126 398 aa17.77■□□□□ 0.44
FOXA1-204ENST00000554607 TMEM56Q96MV1 263 aa17.77■□□□□ 0.44
FOXA1-204ENST00000554607 NUPL2O15504 423 aaKnown RBP17.76■□□□□ 0.43
FOXA1-204ENST00000554607 SNAPC5O75971 98 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms