RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 PMS2P5A8MQ11 134 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 H7C2Y5 167 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 GABRPO00591 440 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 GEMIN2O14893 280 aaKnown RBP3.57□□□□□ -1.84
ATXN3-228ENST00000554592 ZNF780AO75290 641 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-228ENST00000554592 CA11O75493 328 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 PTTG1O95997 202 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 CA2P00918 260 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 TRBV12-3P01733 135 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 HTR1AP08908 422 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 CT45A6P0DMU7 189 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 CT45A5P0DMU8 189 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 CT45A7P0DMV0 189 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 FOLR2P14207 255 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 RAB3AP20336 220 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 S100A1P23297 94 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 DUTP33316 252 aaKnown RBP3.57□□□□□ -1.84
ATXN3-228ENST00000554592 POLR2IP36954 125 aaKnown RBP3.57□□□□□ -1.84
ATXN3-228ENST00000554592 ETV6P41212 452 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 OR3A3P47888 321 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 LGALS7P47929 136 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 APOC4P55056 127 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 RBM11P57052 281 aaKnown RBP3.57□□□□□ -1.84
ATXN3-228ENST00000554592 DEFA1P59665 94 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 DEFA3P59666 94 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 HERV-K104P61576 105 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 HTD2P86397 168 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 ZNF85Q03923 595 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 PSG5Q15238 335 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 MPV17LQ2QL34 196 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 KIAA2026Q5HYC2 2103 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 VPS13DQ5THJ4 4388 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 MEDAGQ5VYS4 303 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 FAM71F2Q6NXP2 309 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 GAPTQ8N292 157 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 OR51A4Q8NGJ6 313 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 OR52B4Q8NGK2 314 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 OR8J1Q8NGP2 316 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 OR4K15Q8NH41 348 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 THRSPQ92748 146 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 Q96MT0 163 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 IL4I1Q96RQ9 567 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 S100A13Q99584 98 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 TSNAXQ99598 290 aaKnown RBP3.57□□□□□ -1.84
ATXN3-228ENST00000554592 CCDC32Q9BV29 185 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 CCDC90BQ9GZT6 254 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 MFFQ9GZY8 342 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 PARP12Q9H0J9 701 aaKnown RBP3.57□□□□□ -1.84
ATXN3-228ENST00000554592 RIMS4Q9H426 269 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-228ENST00000554592 TAF9BQ9HBM6 251 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 SPACA1Q9HBV2 294 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 ACOT13Q9NPJ3 140 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 FKBP14Q9NWM8 211 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 IL36GQ9NZH8 169 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 KCNIP1Q9NZI2 227 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 ZNF581Q9P0T4 197 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 PIPOXQ9P0Z9 390 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 JPT1Q9UK76 154 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 HECTD4Q9Y4D8 3996 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 PEX16Q9Y5Y5 336 aa3.57□□□□□ -1.84
ATXN3-228ENST00000554592 DSCAML1Q8TD84 2053 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 A0A075B6Q4 140 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 KIR2DL5BA0A0G2JN68 375 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 KIR2DL5BA0A0G2JPC4 375 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 C2orf70A6NJV1 201 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 H0YJW9 148 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 RAB29O14966 203 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 CTDSPLO15194 276 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 ATP6V1G1O75348 118 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 GPX5O75715 221 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 UPK1BO75841 260 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 CDRT1O95170 752 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 APOA1P02647 267 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 GLAP06280 429 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 TRAPPC2P0DI81 140 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 TRAPPC2BP0DI82 140 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 SAA2P0DJI9 122 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-228ENST00000554592 GTF2F2P13984 249 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 RCC1P18754 421 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-228ENST00000554592 S100A5P33763 92 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 PPP1CCP36873 323 aaKnown RBP3.56□□□□□ -1.84
ATXN3-228ENST00000554592 MAP2K4P45985 399 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 SNRPGP62308 76 aaKnown RBP3.56□□□□□ -1.84
ATXN3-228ENST00000554592 ATP5G2Q06055 141 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 GPR176Q14439 515 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 SPCS2Q15005 226 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 ZNF57Q68EA5 555 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-228ENST00000554592 C12orf73Q69YU5 71 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 LAIR2Q6ISS4 152 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 FAM131AQ6UXB0 335 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 AHSA2Q719I0 299 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 KIR2DL5AQ8N109 375 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 GVQW1Q8N7I0 195 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 LRTM2Q8N967 370 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 KIR2DL5BQ8NHK3 375 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 GRPEL2Q8TAA5 225 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 C11orf45Q8TAV5 145 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 GALMQ96C23 342 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 PELI1Q96FA3 418 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 SLIRPQ9GZT3 109 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms