RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ZGRF1Q86YA3 2104 aa12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 DYSFO75923 2080 aa12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 DSCAML1Q8TD84 2053 aa12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 IGLV3-9A0A075B6K5 115 aa12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 A0A1B0GUS0 222 aa12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 MDFIC2A0A1B0GVS7 189 aa12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 KLK10O43240 276 aa12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 CEACAM4O75871 244 aa12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 IRF2P14316 349 aa12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 STUMQ69YW2 141 aa12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 RAB1CQ92928 201 aa12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 ZNF705GA8MUZ8 300 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 J3QR06 171 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 CD40P25942 277 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 MLANAQ16655 118 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 SGMS2Q8NHU3 365 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 TANC2Q9HCD6 1990 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 KALRNO60229 2985 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 ZNF292O60281 2723 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 ZNF729A6NN14 1252 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 SRRM4A7MD48 611 aaKnown RBP12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 GCHFRP30047 84 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 SRP14P37108 136 aaKnown RBP12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 DEFA6Q01524 100 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 SFRP2Q96HF1 295 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 PLEKHA3Q9HB20 300 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 SLC35D1Q9NTN3 355 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 TMEM14BQ9NUH8 114 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 GGCTO75223 188 aaKnown RBP12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 TNFSF4P23510 183 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 ACTL10Q5JWF8 245 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 UNQ6494/PRO21346Q6UXR6 183 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 MIR17HGQ75NE6 70 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 OCC1Q8TAD7 63 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 IL19Q9UHD0 177 aa12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 LSM4Q9Y4Z0 139 aaKnown RBP12.85□□□□□ -0.35
ARHGEF40-203ENST00000554514 TRGV8A0A0C4DH27 118 aa12.84□□□□□ -0.35
ARHGEF40-203ENST00000554514 RBMXL3Q8N7X1 1067 aaKnown RBP12.84□□□□□ -0.35
ARHGEF40-203ENST00000554514 OR10W1Q8NGF6 305 aa12.84□□□□□ -0.35
ARHGEF40-203ENST00000554514 FOXA2Q9Y261 457 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF40-203ENST00000554514 TRAPPC1Q9Y5R8 145 aa12.84□□□□□ -0.35
ARHGEF40-203ENST00000554514 CT45A6P0DMU7 189 aa12.84□□□□□ -0.35
ARHGEF40-203ENST00000554514 CT45A5P0DMU8 189 aa12.84□□□□□ -0.35
ARHGEF40-203ENST00000554514 CT45A7P0DMV0 189 aa12.84□□□□□ -0.35
ARHGEF40-203ENST00000554514 CCL3L1P16619 93 aa12.84□□□□□ -0.35
ARHGEF40-203ENST00000554514 RHOBP62745 196 aa12.84□□□□□ -0.35
ARHGEF40-203ENST00000554514 RPL31P62899 125 aaKnown RBP12.84□□□□□ -0.35
ARHGEF40-203ENST00000554514 RAB31Q13636 194 aa12.84□□□□□ -0.35
ARHGEF40-203ENST00000554514 TMEM68Q96MH6 324 aa12.84□□□□□ -0.35
ARHGEF40-203ENST00000554514 SLC17A3O00476 420 aa12.83□□□□□ -0.36
ARHGEF40-203ENST00000554514 Q6ZS92 163 aa12.83□□□□□ -0.36
ARHGEF40-203ENST00000554514 BSNQ9UPA5 3926 aa12.83□□□□□ -0.36
ARHGEF40-203ENST00000554514 TM4SF5O14894 197 aa12.83□□□□□ -0.36
ARHGEF40-203ENST00000554514 TMPRSS3P57727 454 aa12.83□□□□□ -0.36
ARHGEF40-203ENST00000554514 ZNF439Q8NDP4 499 aa12.83□□□□□ -0.36
ARHGEF40-203ENST00000554514 FAM222BQ8WU58 562 aa12.83□□□□□ -0.36
ARHGEF40-203ENST00000554514 PTPRZ1P23471 2315 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 A8MXE2 369 aa12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 HLA-DRB5Q30154 266 aa12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 ZNF788Q6ZQV5 615 aa12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 CISD2Q8N5K1 135 aaKnown RBP12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 H1FXQ92522 213 aaKnown RBP12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 RAB9BQ9NP90 201 aa12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 CCKARP32238 428 aa12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 GATA4P43694 442 aa12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 PSG5Q15238 335 aa12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 RTL8BQ17RB0 113 aa12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 IGHV3-48P01763 117 aa12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 OR10J4P0C629 311 aa12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 TIMP3P35625 211 aa12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 OR5I1Q13606 314 aa12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 MRPL41Q8IXM3 137 aaKnown RBP12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 SFXN3Q9BWM7 321 aa12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 MRPL20Q9BYC9 149 aaKnown RBP12.82□□□□□ -0.36
ARHGEF40-203ENST00000554514 OR7C2O60412 319 aa12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 SAA1P0DJI8 122 aaPredicted RBP12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 GZMBP10144 247 aa12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 CHRNB4P30926 498 aa12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 CNN1P51911 297 aaKnown RBP12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 CASP6P55212 293 aa12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 IMMP2LQ96T52 175 aa12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 SLC25A10Q9UBX3 287 aaPredicted RBP12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 RPUSD1Q9UJJ7 312 aaKnown RBP12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 OR4A8P0C604 315 aa12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 OR10J1P30954 320 aa12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 OR10G8Q8NGN5 311 aa12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 CCL17Q92583 94 aa12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 ADTRPQ96IZ2 230 aa12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 PRNDQ9UKY0 176 aa12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 POLEQ07864 2286 aa12.81□□□□□ -0.36
ARHGEF40-203ENST00000554514 IGKV1OR2-108A0A075B7D4 117 aa12.8□□□□□ -0.36
ARHGEF40-203ENST00000554514 TEX50A0A1B0GTY4 177 aa12.8□□□□□ -0.36
ARHGEF40-203ENST00000554514 GRIFINA4D1Z8 144 aa12.8□□□□□ -0.36
ARHGEF40-203ENST00000554514 K7EN84 100 aa12.8□□□□□ -0.36
ARHGEF40-203ENST00000554514 UPK2O00526 184 aa12.8□□□□□ -0.36
ARHGEF40-203ENST00000554514 GPX4P36969 197 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF40-203ENST00000554514 IGFL3Q6UXB1 125 aa12.8□□□□□ -0.36
ARHGEF40-203ENST00000554514 OR9G1Q8NH87 305 aa12.8□□□□□ -0.36
ARHGEF40-203ENST00000554514 NABP2Q9BQ15 211 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms