RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 MOB3AQ96BX8 217 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 DUX3Q96PT4 197 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 FAM103A1Q9BTL3 118 aaKnown RBP10.17□□□□□ -0.78
SHMT2-211ENST00000554310 PDCD10Q9BUL8 212 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 NMES1Q9C002 83 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 FXYD6Q9H0Q3 95 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 FXYD6-FXYD2A0A087WZ82 144 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 CRYM-AS1A6NIL9 109 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 CCSO14618 274 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 ARPC5O15511 151 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 CNIH1O95406 144 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 MPC2O95563 127 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 PPYP01298 95 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 IFNA7P01567 189 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 PI3P19957 117 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 S100A11P31949 105 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 FCGR2CP31995 323 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 GNB1P62873 340 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 KIAA0141Q14154 515 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-211ENST00000554310 FXYD3Q14802 87 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 TMUB2Q71RG4 321 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 SGPP2Q8IWX5 399 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 TEX45Q8NA69 505 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 ZNF680Q8NEM1 530 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 LFNGQ8NES3 379 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 TMEM68Q96MH6 324 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 GNB4Q9HAV0 340 aa10.16□□□□□ -0.78
SHMT2-211ENST00000554310 AURKAIP1Q9NWT8 199 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-211ENST00000554310 SRRM4A7MD48 611 aaKnown RBP10.15□□□□□ -0.78
SHMT2-211ENST00000554310 H3BUA1 57 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 I3L521 148 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 PRB2P02812 416 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-211ENST00000554310 OR8U8P0C7N1 319 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 AADACP22760 399 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 HTR2BP41595 481 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 SSBP2P81877 361 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-211ENST00000554310 EGFEM1PQ0D2K5 195 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 EIF4EBP1Q13541 118 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-211ENST00000554310 ZNF345Q14585 488 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 ANKRD55Q3KP44 614 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 C11orf87Q6NUJ2 197 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 ZNF66Q6ZN08 573 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 SLC38A6Q8IZM9 456 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 ZBTB34Q8NCN2 500 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 OR11H1Q8NG94 326 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 OR4S2Q8NH73 311 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 RSRP1Q9BUV0 290 aa10.15□□□□□ -0.78
SHMT2-211ENST00000554310 A0A0D9SG52 128 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 C5orf51A6NDU8 294 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 FCGR3BO75015 233 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 LGALS1P09382 135 aaKnown RBP10.14□□□□□ -0.79
SHMT2-211ENST00000554310 SAA1P0DJI8 122 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-211ENST00000554310 KIR2DS2P43631 304 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 TPPP2P59282 170 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 HERV-K104P61576 105 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 RPL30P62888 115 aaKnown RBP10.14□□□□□ -0.79
SHMT2-211ENST00000554310 ZNF616Q08AN1 781 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 PJVKQ0ZLH3 352 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 PRSS8Q16651 343 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 ZNF546Q86UE3 836 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 CCDC71LQ8N9Z2 235 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 PPP1R1CQ8WVI7 109 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 SECTM1Q8WVN6 248 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 TCTEX1D2Q8WW35 142 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 GALNT14Q96FL9 552 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 SEC22AQ96IW7 307 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 C2orf50Q96LR7 162 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 MFFQ9GZY8 342 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 ZMAT5Q9UDW3 170 aaKnown RBP10.14□□□□□ -0.79
SHMT2-211ENST00000554310 TNFSF18Q9UNG2 199 aa10.14□□□□□ -0.79
SHMT2-211ENST00000554310 TEX13DA0A0J9YY54 714 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-211ENST00000554310 FAM25EA8MYX2 175 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 PSMB6P28072 239 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 PIGPP57054 158 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 OR2F1Q13607 317 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 EXOSC2Q13868 293 aaKnown RBP10.13□□□□□ -0.79
SHMT2-211ENST00000554310 OR2B11Q5JQS5 317 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 KCNRGQ8N5I3 272 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 OR1N2Q8NGR9 330 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 VSTM2AQ8TAG5 236 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 THAP6Q8TBB0 222 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 MRAPQ8TCY5 172 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 OR5B12Q96R08 314 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 SLC5A7Q9GZV3 580 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 NAA60Q9H7X0 242 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 CCL28Q9NRJ3 127 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 UBQLN2Q9UHD9 624 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 KCNIP3Q9Y2W7 256 aa10.13□□□□□ -0.79
SHMT2-211ENST00000554310 C13orf42A0A1B0GVH6 325 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 RBFOX2O43251 390 aaKnown RBP eCLIP10.12□□□□□ -0.795e-15■■■■■ 33.3
SHMT2-211ENST00000554310 ACTL6BO94805 426 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 BRI3O95415 125 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 TRGV3P03979 118 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 LYL1P12980 280 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 HOXD3P31249 432 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-211ENST00000554310 FXYD4P59646 89 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 RND3P61587 244 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 CATR1Q13166 79 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 IL15RAQ13261 267 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 TNXAQ16473 311 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms