RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 ARPC1BO15143 372 aaKnown RBP5.97□□□□□ -1.45
ABCD4-220ENST00000553998 SFT2D2O95562 160 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 KRASP01116 189 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 IGKV1-39P01597 117 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 IGHG4P01861 327 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 IGKV1D-39P04432 117 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 AKR1C4P17516 323 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 HLA-GP17693 338 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 VDAC1P21796 283 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 RAB25P57735 213 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 RPL8P62917 257 aaKnown RBP5.97□□□□□ -1.45
ABCD4-220ENST00000553998 SUPT4H1P63272 117 aaKnown RBP5.97□□□□□ -1.45
ABCD4-220ENST00000553998 RUNX1Q01196 453 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 CFHR3Q02985 330 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 TMEM267Q0VDI3 215 aaPredicted RBP5.97□□□□□ -1.45
ABCD4-220ENST00000553998 TMEM187Q14656 261 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 FXYD3Q14802 87 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 MRGPRG-AS1Q2M3A8 158 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 DEFB136Q30KP8 78 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 SP6Q3SY56 376 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 THOC7Q6I9Y2 204 aaKnown RBP5.97□□□□□ -1.45
ABCD4-220ENST00000553998 OR4A47Q6IF82 309 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 SSX9Q7RTT3 188 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 VKORC1L1Q8N0U8 176 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 LGI3Q8N145 548 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 LRTM2Q8N967 370 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 DUSP18Q8NEJ0 188 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 DMBX1Q8NFW5 382 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 ENKURQ8TC29 256 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 MYOZ3Q8TDC0 251 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 C4orf3Q8WVX3 66 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 ARPC1AQ92747 370 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 RBPMSQ93062 196 aaKnown RBP5.97□□□□□ -1.45
ABCD4-220ENST00000553998 RRNAD1Q96FB5 475 aaKnown RBP5.97□□□□□ -1.45
ABCD4-220ENST00000553998 C20orf85Q9H1P6 137 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 ZNF430Q9H8G1 570 aaPredicted RBP5.97□□□□□ -1.45
ABCD4-220ENST00000553998 TPSG1Q9NRR2 321 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 FKBP11Q9NYL4 201 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 PRNDQ9UKY0 176 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 NUBP2Q9Y5Y2 271 aa5.97□□□□□ -1.45
ABCD4-220ENST00000553998 KMT2AQ03164 3969 aa5.96□□□□□ -1.45
ABCD4-220ENST00000553998 A0A0B4J2A0 478 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 DUXBA0A1W2PPF3 345 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 ATP6V0E1O15342 81 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 SNAPC5O75971 98 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 CNIH1O95406 144 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 OR4E1P0C645 316 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 P0C879 139 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 VAMP1P23763 118 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 G6PCP35575 357 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 MECP2P51608 486 aaKnown RBP5.96□□□□□ -1.46
ABCD4-220ENST00000553998 AKR1C2P52895 323 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 SSBP2P81877 361 aaPredicted RBP5.96□□□□□ -1.46
ABCD4-220ENST00000553998 NDPQ00604 133 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 PJVKQ0ZLH3 352 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 PPP1R1AQ13522 171 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 KIAA0141Q14154 515 aaPredicted RBP5.96□□□□□ -1.46
ABCD4-220ENST00000553998 TNXAQ16473 311 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 AKIRIN2Q53H80 203 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 CXorf66Q5JRM2 361 aaPredicted RBP5.96□□□□□ -1.46
ABCD4-220ENST00000553998 ASPHD1Q5U4P2 390 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 TMEM268Q5VZI3 342 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 H2BFWTQ7Z2G1 175 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 SELENOHQ8IZQ5 122 aaKnown RBP5.96□□□□□ -1.46
ABCD4-220ENST00000553998 OR5B3Q8NH48 314 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 SRSF12Q8WXF0 261 aaKnown RBP5.96□□□□□ -1.46
ABCD4-220ENST00000553998 LSM10Q969L4 123 aaKnown RBP5.96□□□□□ -1.46
ABCD4-220ENST00000553998 CLCC1Q96S66 551 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 SPIN2AQ99865 258 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 SPIN2BQ9BPZ2 258 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 SRSF8Q9BRL6 282 aaKnown RBP5.96□□□□□ -1.46
ABCD4-220ENST00000553998 PARP11Q9NR21 331 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 NUDT15Q9NV35 164 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 CACFD1Q9UGQ2 172 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 SHPKQ9UHJ6 478 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 FLVCR2Q9UPI3 526 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 ZNF257Q9Y2Q1 563 aa5.96□□□□□ -1.46
ABCD4-220ENST00000553998 TRAV41A0A0B4J266 112 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 C9orf170A2RU37 121 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 C15orf61A6NNL5 157 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 H3BUA1 57 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 I3L521 148 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 JTBO76095 146 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 PTTG1O95997 202 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 IGKV1-5P01602 117 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 HLA-AP01891 365 aaKnown RBP5.95□□□□□ -1.46
ABCD4-220ENST00000553998 H2AFB2P0C5Z0 115 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 OR8U8P0C7N1 319 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 EGR2P11161 476 aaPredicted RBP5.95□□□□□ -1.46
ABCD4-220ENST00000553998 ANXA7P20073 488 aaKnown RBP5.95□□□□□ -1.46
ABCD4-220ENST00000553998 PSMB8P28062 276 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 PPIFP30405 207 aaKnown RBP5.95□□□□□ -1.46
ABCD4-220ENST00000553998 RPL27AP46776 148 aaKnown RBP5.95□□□□□ -1.46
ABCD4-220ENST00000553998 GNB1P62873 340 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 DHRS2Q13268 280 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 KIAA1109Q2LD37 5005 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 C4orf46Q504U0 113 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 C19orf54Q5BKX5 351 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 PLET1Q6UQ28 207 aa5.95□□□□□ -1.46
ABCD4-220ENST00000553998 HSD17B13Q7Z5P4 300 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms