RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 PLXNB1O43157 2135 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 IGLC7A0M8Q6 106 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 FAM24AA6NFZ4 105 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 CEBPZOSA8MTT3 80 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 SLC25A17O43808 307 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 CRYGCP07315 174 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 SPP1P10451 314 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 GPX4P36969 197 aaPredicted RBP8.68□□□□□ -1.02
PABPN1-203ENST00000553960 RAB5CP51148 216 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 CAV2P51636 162 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 F2RL1P55085 397 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 DLX1P56177 255 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 RAB11AP62491 216 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 NHLH2Q02577 135 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 CLLU1Q5K131 121 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 SSX9Q7RTT3 188 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 HAPLN4Q86UW8 402 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 OR1S2Q8NGQ3 325 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 NANPQ8TBE9 248 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 GNPNAT1Q96EK6 184 aaPredicted RBP8.68□□□□□ -1.02
PABPN1-203ENST00000553960 RITA1Q96K30 269 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 OR4C12Q96R67 309 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 ATP5SQ99766 215 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 PSMG3Q9BT73 122 aaPredicted RBP8.68□□□□□ -1.02
PABPN1-203ENST00000553960 SLC25A32Q9H2D1 315 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 PLEKHA3Q9HB20 300 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 KIAA1456Q9P272 454 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 PITPNC1Q9UKF7 332 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 NUP50Q9UKX7 468 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 HILPDAQ9Y5L2 63 aa8.68□□□□□ -1.02
PABPN1-203ENST00000553960 TEX15Q9BXT5 2789 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 A0A1W2PRD5 423 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 A0A1W2PRF3 423 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 A0A1W2PRM7 423 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 UMAD1C9J7I0 102 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 CORTO00230 105 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 RBMXL2O75526 392 aaKnown RBP8.67□□□□□ -1.02
PABPN1-203ENST00000553960 TGFAP01135 160 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 AVPP01185 164 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 IGKV1D-33P01593 117 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 IGKV1-33P01594 117 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 SUB1P53999 127 aaKnown RBP eCLIP8.67□□□□□ -1.02
PABPN1-203ENST00000553960 ERHP84090 104 aaKnown RBP8.67□□□□□ -1.02
PABPN1-203ENST00000553960 SERF2P84101 59 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 LRRC75BQ2VPJ9 315 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 Q8N9W7 124 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 SLC24A4Q8NFF2 622 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 OR10P1Q8NGE3 313 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 OR5C1Q8NGR4 320 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 OR2G3Q8NGZ4 309 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 OR1P1Q8NH06 330 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 OR5R1Q8NH85 324 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 TMEM170AQ8WVE7 144 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 SAT2Q96F10 170 aaPredicted RBP8.67□□□□□ -1.02
PABPN1-203ENST00000553960 RBM14Q96PK6 669 aaKnown RBP8.67□□□□□ -1.02
PABPN1-203ENST00000553960 ATP6V0BQ99437 205 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 TMEM147Q9BVK8 224 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 HEYLQ9NQ87 328 aaPredicted RBP8.67□□□□□ -1.02
PABPN1-203ENST00000553960 METTL1Q9UBP6 276 aaKnown RBP8.67□□□□□ -1.02
PABPN1-203ENST00000553960 UBQLN2Q9UHD9 624 aa8.67□□□□□ -1.02
PABPN1-203ENST00000553960 PAIP2BQ9ULR5 123 aaKnown RBP8.67□□□□□ -1.02
PABPN1-203ENST00000553960 FLNAP21333 2647 aaKnown RBP8.67□□□□□ -1.02
PABPN1-203ENST00000553960 TRAV40A0A0B4J280 105 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 A0A1B0GW64 132 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 NPIPB5A8MRT5 1133 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 TEX22C9J3V5 150 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 TRIM77I1YAP6 450 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 CD5LO43866 347 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 CFDP00746 253 aaPredicted RBP8.66□□□□□ -1.02
PABPN1-203ENST00000553960 RNASE2P10153 161 aaKnown RBP8.66□□□□□ -1.02
PABPN1-203ENST00000553960 NPY1RP25929 384 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 RPL27AP46776 148 aaKnown RBP8.66□□□□□ -1.02
PABPN1-203ENST00000553960 EXOSC2Q13868 293 aaKnown RBP8.66□□□□□ -1.02
PABPN1-203ENST00000553960 MMDQ15546 238 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 DPPA3Q6W0C5 159 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 SPNS3Q6ZMD2 512 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 TMEM86BQ8N661 226 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 LYPD6BQ8NI32 183 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 ZDHHC16Q969W1 377 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 ZNF471Q9BX82 626 aaPredicted RBP8.66□□□□□ -1.02
PABPN1-203ENST00000553960 WFDC1Q9HC57 220 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 ENY2Q9NPA8 101 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 LSM4Q9Y4Z0 139 aaKnown RBP8.66□□□□□ -1.02
PABPN1-203ENST00000553960 MYO9AB2RTY4 2548 aa8.66□□□□□ -1.02
PABPN1-203ENST00000553960 IGHV3-72A0A0B4J1Y9 119 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 RPS10-NUDT3A0A1W2PQS6 291 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 A6NDX4 124 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 ACTL6BO94805 426 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 FAM157CP0CG43 387 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 IGHV4-38-2P0DP08 117 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 FOSL1P15407 271 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 SULT1A2P50226 295 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 WT1-ASQ06250 92 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 KRTAP1-1Q07627 177 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 ARL16Q0P5N6 197 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 PMS2P11Q13670 270 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 SPANXN5Q5MJ07 72 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 RPL7L1Q6DKI1 246 aaKnown RBP8.65□□□□□ -1.02
PABPN1-203ENST00000553960 WFDC11Q8NEX6 87 aa8.65□□□□□ -1.02
PABPN1-203ENST00000553960 C17orf50Q8WW18 174 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms