RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 RBFOX2O43251 390 aaKnown RBP eCLIP6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 REG1AP05451 166 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 SERPINE2P07093 398 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 IL6RP08887 468 aaPredicted RBP6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 OR5AC1P0C628 307 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 FRMD6-AS1P0C7T7 363 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 NQO2P16083 231 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 FAUP35544 74 aaKnown RBP6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 TAS2R31P59538 309 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 AP3S2P59780 193 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 RND3P61587 244 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 SPINK9Q5DT21 86 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 LHFPL5Q8TAF8 219 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 CD300LFQ8TDQ1 290 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 SRSF12Q8WXF0 261 aaKnown RBP6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 BORCS5Q969J3 196 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 TMEM68Q96MH6 324 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 PLEKHA2Q9HB19 425 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 RANGRFQ9HD47 186 aaPredicted RBP6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 SLC2A8Q9NY64 477 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 COA4Q9NYJ1 87 aa6.94□□□□□ -1.3
SDR39U1-207ENST00000553937 A0A0G2JRQ6 117 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 CGB1A6NKQ9 187 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 MARCH11A6NNE9 402 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 H0Y980 276 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 UPK2O00526 184 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 RBMXL2O75526 392 aaKnown RBP6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 ACTL6BO94805 426 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 IGKV1-5P01602 117 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 IGLV1-51P01701 117 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 TRBV12-3P01733 135 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 AREGP15514 252 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 HLA-GP17693 338 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 ZP3P21754 424 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 BTCP35070 178 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 RPL27AP46776 148 aaKnown RBP6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 ERVK-16P61578 105 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 RPL8P62917 257 aaKnown RBP6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 TRIM16LQ309B1 348 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 MMD2Q8IY49 270 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 CCDC71LQ8N9Z2 235 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 OR10W1Q8NGF6 305 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 TMEM167AQ8TBQ9 72 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 ZNF486Q96H40 463 aaPredicted RBP6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 SEC22AQ96IW7 307 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 ELOVL1Q9BW60 279 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 HINT2Q9BX68 163 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 NAA60Q9H7X0 242 aa6.93□□□□□ -1.3
SDR39U1-207ENST00000553937 DYNC2H1Q8NCM8 4307 aaKnown RBP6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 TEX50A0A1B0GTY4 177 aa6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 CRYM-AS1A6NIL9 109 aa6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 TEX22C9J3V5 150 aa6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 BRI3O95415 125 aa6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 SUPT4H1P63272 117 aaKnown RBP6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 IFITM3Q01628 133 aa6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 ZNF343Q6P1L6 599 aa6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 OR9G4Q8NGQ1 327 aa6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 GLYATL2Q8WU03 294 aa6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 RCHY1Q96PM5 261 aa6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 QTRT1Q9BXR0 403 aaKnown RBP6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 BET1LQ9NYM9 111 aa6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 COMMD9Q9P000 198 aa6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 PEF1Q9UBV8 284 aaKnown RBP6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 OR51B2Q9Y5P1 312 aa6.92□□□□□ -1.3
SDR39U1-207ENST00000553937 LYRM1O43325 122 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 NXPH3O95157 252 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 IGHV4-30-4P0DP06 118 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 ANXA7P20073 488 aaKnown RBP6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 VAMP1P23763 118 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 UCP1P25874 307 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 AKR1C2P52895 323 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 SYNJ2BPP57105 145 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 PPP1R1AQ13522 171 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 KLF5Q13887 457 aaPredicted RBP6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 TMEM187Q14656 261 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 ZNF846Q147U1 533 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 SURF2Q15527 256 aaPredicted RBP6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 POU2AF1Q16633 256 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 TMEM268Q5VZI3 342 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 IL34Q6ZMJ4 242 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 H2BFWTQ7Z2G1 175 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 SGPP2Q8IWX5 399 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 SELENOHQ8IZQ5 122 aaKnown RBP6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 Q8N1Y9 231 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 RNASE11Q8TAA1 199 aaKnown RBP6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 VSTM2AQ8TAG5 236 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 S100ZQ8WXG8 99 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 USMG5Q96IX5 58 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 TMEM222Q9H0R3 208 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 TBC1D24Q9ULP9 559 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 S4R3C0 116 aa6.91□□□□□ -1.3
SDR39U1-207ENST00000553937 TRAV6A0A075B6T7 132 aa6.9□□□□□ -1.3
SDR39U1-207ENST00000553937 A0A0B4J293 547 aa6.9□□□□□ -1.3
SDR39U1-207ENST00000553937 C3orf84H3BNL1 204 aa6.9□□□□□ -1.3
SDR39U1-207ENST00000553937 CREBL2O60519 120 aaPredicted RBP6.9□□□□□ -1.3
SDR39U1-207ENST00000553937 SNAPC5O75971 98 aa6.9□□□□□ -1.3
SDR39U1-207ENST00000553937 NDUFB6O95139 128 aa6.9□□□□□ -1.3
SDR39U1-207ENST00000553937 IGHV3-23P01764 117 aa6.9□□□□□ -1.3
SDR39U1-207ENST00000553937 RHOGP84095 191 aa6.9□□□□□ -1.3
SDR39U1-207ENST00000553937 EXOSC2Q13868 293 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms