RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 A0A1W2PPI3 338 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 CEBPZOSA8MTT3 80 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 A8MV72 311 aaPredicted RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 RRHO14718 337 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 TIMM23O14925 209 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 NBR2O15453 112 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 SYNGR2O43760 224 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 PITX3O75364 302 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 VENTXO95231 258 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 MPC2O95563 127 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 SCGB1D2O95969 90 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 IGKV1D-33P01593 117 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 IGKV1-33P01594 117 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 IGKV1-39P01597 117 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 IGKV1-5P01602 117 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 IGKV1D-39P04432 117 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 IL6RP08887 468 aaPredicted RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 TMEM11P17152 192 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 CHRNA7P36544 502 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 SRP14P37108 136 aaKnown RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 P2RY1P47900 373 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 AP2S1P53680 142 aaPredicted RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 SUB1P53999 127 aaKnown RBP eCLIP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 F2RL1P55085 397 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 ELLP55199 621 aaPredicted RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 DLX1P56177 255 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 H2BFSP57053 126 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 LINC00205P59089 165 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 TAS2R30P59541 319 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 S100A10P60903 97 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 HSPE1P61604 102 aaKnown RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 RPL8P62917 257 aaKnown RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 ERHP84090 104 aaKnown RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 IL15RAQ13261 267 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 RAB32Q13637 225 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 DIAPH2-AS1Q14236 149 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 LRRC75BQ2VPJ9 315 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 UTF1Q5T230 341 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 OR4A47Q6IF82 309 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 PRSS54Q6PEW0 395 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 TMEM65Q6PI78 240 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 RBMS3Q6XE24 437 aaKnown RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 C9orf139Q6ZV77 190 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 C16orf82Q7Z2V1 217 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 HSD17B13Q7Z5P4 300 aaPredicted RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 ZNF546Q86UE3 836 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 PUSL1Q8N0Z8 303 aaKnown RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 FAM71E2Q8N5Q1 922 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 MAPK1IP1LQ8NDC0 245 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 OR1L8Q8NGR8 309 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 OR5B3Q8NH48 314 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 OR5R1Q8NH85 324 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 GRPEL2Q8TAA5 225 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 TMEM167AQ8TBQ9 72 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 SSX3Q99909 188 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 RASL11BQ9BPW5 248 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 COMMD5Q9GZQ3 224 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 ZC4H2Q9NQZ6 224 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 YAE1D1Q9NRH1 226 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 ZNRD1Q9P1U0 126 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 CACNG5Q9UF02 275 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 LSM5Q9Y4Y9 91 aaKnown RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 UBR5O95071 2799 aaPredicted RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 LRRK2Q5S007 2527 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4□□□□□ -1.77
VTI1B-202ENST00000553619 NBEAQ8NFP9 2946 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 IGHV3-72A0A0B4J1Y9 119 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 C15orf61A6NNL5 157 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 NCBP2LA6PVI3 153 aaKnown RBP4□□□□□ -1.77
VTI1B-202ENST00000553619 SRRM4A7MD48 611 aaKnown RBP4□□□□□ -1.77
VTI1B-202ENST00000553619 MPTX1A8MV57 137 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 K7EPK0 472 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 M0QZK8 103 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 TAAR5O14804 337 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 CYB5BO43169 146 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 CHST1O43916 411 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 DEDDO75618 318 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 OR2F2O95006 317 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 NDUFA3O95167 84 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 CNIH1O95406 144 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 MBPP02686 304 aaPredicted RBP4□□□□□ -1.77
VTI1B-202ENST00000553619 IGKV1-16P04430 117 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 OR9G9P0C7N8 305 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 P0C879 139 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 SAA1P0DJI8 122 aaPredicted RBP4□□□□□ -1.77
VTI1B-202ENST00000553619 IGHV4-38-2P0DP08 117 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 LYL1P12980 280 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 CD99P14209 185 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 EIF2B2P49770 351 aaKnown RBP4□□□□□ -1.77
VTI1B-202ENST00000553619 RAB11AP62491 216 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 EIF5AP63241 154 aaKnown RBP4□□□□□ -1.77
VTI1B-202ENST00000553619 PRB3Q04118 309 aaPredicted RBP4□□□□□ -1.77
VTI1B-202ENST00000553619 TNFRSF9Q07011 255 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 TMEM267Q0VDI3 215 aaPredicted RBP4□□□□□ -1.77
VTI1B-202ENST00000553619 OR2F1Q13607 317 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 PSG5Q15238 335 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 MMDQ15546 238 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 LRRC37A5PQ49AS3 106 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 AARDQ4LEZ3 155 aa4□□□□□ -1.77
VTI1B-202ENST00000553619 TOR2AQ5JU69 321 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms