RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 FIS1Q9Y3D6 152 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 PCYT1BQ9Y5K3 369 aaPredicted RBP2.59□□□□□ -1.99
TDP1-207ENST00000553617 SOX21Q9Y651 276 aaPredicted RBP2.59□□□□□ -1.99
TDP1-207ENST00000553617 ENPP4Q9Y6X5 453 aa2.59□□□□□ -1.99
TDP1-207ENST00000553617 NOTCH3Q9UM47 2321 aa2.59□□□□□ -2
TDP1-207ENST00000553617 ADAMTSL1Q8N6G6 1762 aa2.59□□□□□ -2
TDP1-207ENST00000553617 TECPR2O15040 1411 aa2.59□□□□□ -2
TDP1-207ENST00000553617 CPSF1Q10570 1443 aaKnown RBP2.59□□□□□ -2
TDP1-207ENST00000553617 YEATS2Q9ULM3 1422 aa2.59□□□□□ -2
TDP1-207ENST00000553617 PHIPQ8WWQ0 1821 aa2.58□□□□□ -2
TDP1-207ENST00000553617 DNMT1P26358 1616 aaKnown RBP2.58□□□□□ -2
TDP1-207ENST00000553617 IGHV2-26A0A0B4J1V2 119 aa2.58□□□□□ -2
TDP1-207ENST00000553617 IGHV1-69DA0A0B4J2H0 117 aa2.58□□□□□ -2
TDP1-207ENST00000553617 A0A0J9YXV3 536 aa2.58□□□□□ -2
TDP1-207ENST00000553617 LOC107984640A0A0U1RRK4 108 aa2.58□□□□□ -2
TDP1-207ENST00000553617 TMEM269A0A1B0GVZ9 245 aa2.58□□□□□ -2
TDP1-207ENST00000553617 TMEM72A0PK05 275 aa2.58□□□□□ -2
TDP1-207ENST00000553617 F5H5P2 479 aa2.58□□□□□ -2
TDP1-207ENST00000553617 MPC2O95563 127 aa2.58□□□□□ -2
TDP1-207ENST00000553617 MT-ND4LP03901 98 aa2.58□□□□□ -2
TDP1-207ENST00000553617 IGLC6P0CF74 106 aa2.58□□□□□ -2
TDP1-207ENST00000553617 CRHBPP24387 322 aa2.58□□□□□ -2
TDP1-207ENST00000553617 GUCA1AP43080 201 aaPredicted RBP2.58□□□□□ -2
TDP1-207ENST00000553617 P2RX1P51575 399 aa2.58□□□□□ -2
TDP1-207ENST00000553617 UBE2NP61088 152 aaKnown RBP2.58□□□□□ -2
TDP1-207ENST00000553617 PPP1CAP62136 330 aa2.58□□□□□ -2
TDP1-207ENST00000553617 GRB2P62993 217 aaKnown RBP2.58□□□□□ -2
TDP1-207ENST00000553617 HSD52Q0P140 79 aa2.58□□□□□ -2
TDP1-207ENST00000553617 RTL8BQ17RB0 113 aa2.58□□□□□ -2
TDP1-207ENST00000553617 TMEM241Q24JQ0 296 aa2.58□□□□□ -2
TDP1-207ENST00000553617 PYY3Q5JQD4 70 aa2.58□□□□□ -2
TDP1-207ENST00000553617 Q5XG85 94 aa2.58□□□□□ -2
TDP1-207ENST00000553617 RPL22L1Q6P5R6 122 aaKnown RBP2.58□□□□□ -2
TDP1-207ENST00000553617 FAM19A3Q7Z5A8 133 aa2.58□□□□□ -2
TDP1-207ENST00000553617 ZNF429Q86V71 674 aa2.58□□□□□ -2
TDP1-207ENST00000553617 ZIC4Q8N9L1 334 aa2.58□□□□□ -2
TDP1-207ENST00000553617 OR4K5Q8NGD3 323 aa2.58□□□□□ -2
TDP1-207ENST00000553617 PPTC7Q8NI37 304 aa2.58□□□□□ -2
TDP1-207ENST00000553617 RXFP4Q8TDU9 374 aa2.58□□□□□ -2
TDP1-207ENST00000553617 DEDD2Q8WXF8 326 aa2.58□□□□□ -2
TDP1-207ENST00000553617 RBPMSQ93062 196 aaKnown RBP2.58□□□□□ -2
TDP1-207ENST00000553617 FAM104AQ969W3 186 aa2.58□□□□□ -2
TDP1-207ENST00000553617 ELSPBP1Q96BH3 223 aa2.58□□□□□ -2
TDP1-207ENST00000553617 RTL8AQ9BWD3 113 aa2.58□□□□□ -2
TDP1-207ENST00000553617 SFXN3Q9BWM7 321 aa2.58□□□□□ -2
TDP1-207ENST00000553617 SLC25A2Q9BXI2 301 aa2.58□□□□□ -2
TDP1-207ENST00000553617 MRPL20Q9BYC9 149 aaKnown RBP2.58□□□□□ -2
TDP1-207ENST00000553617 PRO1933Q9H354 126 aa2.58□□□□□ -2
TDP1-207ENST00000553617 CXorf21Q9HAI6 301 aa2.58□□□□□ -2
TDP1-207ENST00000553617 FAM49BQ9NUQ9 324 aa2.58□□□□□ -2
TDP1-207ENST00000553617 TVP23BQ9NYZ1 205 aa2.58□□□□□ -2
TDP1-207ENST00000553617 AMMECR1Q9Y4X0 333 aaPredicted RBP2.58□□□□□ -2
TDP1-207ENST00000553617 DISP2A7MBM2 1401 aa2.58□□□□□ -2
TDP1-207ENST00000553617 NCKAP5O14513 1909 aa2.58□□□□□ -2
TDP1-207ENST00000553617 IFT140Q96RY7 1462 aa2.58□□□□□ -2
TDP1-207ENST00000553617 CDK5RAP2Q96SN8 1893 aa2.57□□□□□ -2
TDP1-207ENST00000553617 IGLV11-55A0A075B6I3 123 aa2.57□□□□□ -2
TDP1-207ENST00000553617 IGHV3-66A0A0C4DH42 116 aa2.57□□□□□ -2
TDP1-207ENST00000553617 TRDV1A0A1B0GX56 115 aa2.57□□□□□ -2
TDP1-207ENST00000553617 A6NDX4 124 aa2.57□□□□□ -2
TDP1-207ENST00000553617 GGT3PA6NGU5 568 aa2.57□□□□□ -2
TDP1-207ENST00000553617 BBIP1A8MTZ0 92 aa2.57□□□□□ -2
TDP1-207ENST00000553617 KLLNB2CW77 178 aa2.57□□□□□ -2
TDP1-207ENST00000553617 GGTLC3B5MD39 225 aa2.57□□□□□ -2
TDP1-207ENST00000553617 H0YJW9 148 aa2.57□□□□□ -2
TDP1-207ENST00000553617 GABARAPH6UMI1 98 aa2.57□□□□□ -2
TDP1-207ENST00000553617 J3QQQ9 107 aa2.57□□□□□ -2
TDP1-207ENST00000553617 ISLRO14498 428 aa2.57□□□□□ -2
TDP1-207ENST00000553617 NPFFO15130 113 aa2.57□□□□□ -2
TDP1-207ENST00000553617 GSTZ1O43708 216 aaPredicted RBP2.57□□□□□ -2
TDP1-207ENST00000553617 APOMO95445 188 aa2.57□□□□□ -2
TDP1-207ENST00000553617 NDUFA6P56556 154 aa2.57□□□□□ -2
TDP1-207ENST00000553617 RBM11P57052 281 aaKnown RBP2.57□□□□□ -2
TDP1-207ENST00000553617 FKBP1AP62942 108 aaKnown RBP2.57□□□□□ -2
TDP1-207ENST00000553617 HERVK_113P63121 156 aa2.57□□□□□ -2
TDP1-207ENST00000553617 ADIGQ0VDE8 80 aa2.57□□□□□ -2
TDP1-207ENST00000553617 RBMY1FQ15415 496 aaKnown RBP2.57□□□□□ -2
TDP1-207ENST00000553617 CST6Q15828 149 aa2.57□□□□□ -2
TDP1-207ENST00000553617 UBE2NLQ5JXB2 153 aa2.57□□□□□ -2
TDP1-207ENST00000553617 C6orf52Q5T4I8 152 aa2.57□□□□□ -2
TDP1-207ENST00000553617 TMEM244Q5VVB8 128 aa2.57□□□□□ -2
TDP1-207ENST00000553617 AMMECR1LQ6DCA0 310 aa2.57□□□□□ -2
TDP1-207ENST00000553617 CEMP1Q6PRD7 247 aaPredicted RBP2.57□□□□□ -2
TDP1-207ENST00000553617 Q6Q795 121 aa2.57□□□□□ -2
TDP1-207ENST00000553617 PRNTQ86SH4 94 aa2.57□□□□□ -2
TDP1-207ENST00000553617 GKN2Q86XP6 184 aa2.57□□□□□ -2
TDP1-207ENST00000553617 C15orf56Q8N910 161 aa2.57□□□□□ -2
TDP1-207ENST00000553617 Q8N9W7 124 aa2.57□□□□□ -2
TDP1-207ENST00000553617 TMEM75Q8N9X5 138 aa2.57□□□□□ -2
TDP1-207ENST00000553617 FER1L6-AS1Q8NA97 138 aa2.57□□□□□ -2
TDP1-207ENST00000553617 OR52P1PQ8NH57 321 aa2.57□□□□□ -2
TDP1-207ENST00000553617 OR51H1Q8NH63 302 aa2.57□□□□□ -2
TDP1-207ENST00000553617 LMX1AQ8TE12 382 aa2.57□□□□□ -2
TDP1-207ENST00000553617 TWIST2Q8WVJ9 160 aa2.57□□□□□ -2
TDP1-207ENST00000553617 LCN9Q8WX39 176 aa2.57□□□□□ -2
TDP1-207ENST00000553617 BORCS8Q96FH0 119 aa2.57□□□□□ -2
TDP1-207ENST00000553617 OR4C12Q96R67 309 aa2.57□□□□□ -2
TDP1-207ENST00000553617 SLC25A21Q9BQT8 299 aaPredicted RBP2.57□□□□□ -2
TDP1-207ENST00000553617 NAA38Q9BRA0 125 aaKnown RBP2.57□□□□□ -2
TDP1-207ENST00000553617 HDHD3Q9BSH5 251 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms