RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 WI2-2373I1.2A0A1W2PRP0 233 aa18.24■□□□□ 0.51
TDP1-205ENST00000553527 LINC01619G3V211 115 aa18.24■□□□□ 0.51
TDP1-205ENST00000553527 KRASP01116 189 aa18.24■□□□□ 0.51
TDP1-205ENST00000553527 TCRBP04435 133 aa18.24■□□□□ 0.51
TDP1-205ENST00000553527 ANXA3P12429 323 aa18.24■□□□□ 0.51
TDP1-205ENST00000553527 G6PCP35575 357 aa18.24■□□□□ 0.51
TDP1-205ENST00000553527 DHODHQ02127 395 aa18.24■□□□□ 0.51
TDP1-205ENST00000553527 EGFEM1PQ0D2K5 195 aa18.24■□□□□ 0.51
TDP1-205ENST00000553527 TMEM128Q5BJH2 165 aa18.24■□□□□ 0.51
TDP1-205ENST00000553527 C9orf66Q5T8R8 295 aa18.24■□□□□ 0.51
TDP1-205ENST00000553527 SLC25A42Q86VD7 318 aa18.24■□□□□ 0.51
TDP1-205ENST00000553527 GALNT14Q96FL9 552 aa18.24■□□□□ 0.51
TDP1-205ENST00000553527 TMEM68Q96MH6 324 aa18.24■□□□□ 0.51
TDP1-205ENST00000553527 BET1LQ9NYM9 111 aa18.24■□□□□ 0.51
TDP1-205ENST00000553527 ATG12O94817 140 aa18.23■□□□□ 0.51
TDP1-205ENST00000553527 IGKV1-39P01597 117 aa18.23■□□□□ 0.51
TDP1-205ENST00000553527 IGKV1D-39P04432 117 aa18.23■□□□□ 0.51
TDP1-205ENST00000553527 VAMP1P23763 118 aa18.23■□□□□ 0.51
TDP1-205ENST00000553527 UBE2MP61081 183 aaKnown RBP18.23■□□□□ 0.51
TDP1-205ENST00000553527 SUPT4H1P63272 117 aaKnown RBP18.23■□□□□ 0.51
TDP1-205ENST00000553527 OR4A5Q8NH83 315 aa18.23■□□□□ 0.51
TDP1-205ENST00000553527 TMEM167AQ8TBQ9 72 aa18.23■□□□□ 0.51
TDP1-205ENST00000553527 DLX4Q92988 240 aaPredicted RBP18.23■□□□□ 0.51
TDP1-205ENST00000553527 NUDT15Q9NV35 164 aa18.23■□□□□ 0.51
TDP1-205ENST00000553527 ANKRD34BA5PLL1 514 aa18.22■□□□□ 0.51
TDP1-205ENST00000553527 K7EIL1 84 aa18.22■□□□□ 0.51
TDP1-205ENST00000553527 HSPB1P04792 205 aaKnown RBP18.22■□□□□ 0.51
TDP1-205ENST00000553527 PPP1R1AQ13522 171 aa18.22■□□□□ 0.51
TDP1-205ENST00000553527 GLYATL2Q8WU03 294 aa18.22■□□□□ 0.51
TDP1-205ENST00000553527 FYTTD1Q96QD9 318 aaKnown RBP18.22■□□□□ 0.51
TDP1-205ENST00000553527 TRAV6A0A075B6T7 132 aa18.21■□□□□ 0.51
TDP1-205ENST00000553527 H3BUA1 57 aa18.21■□□□□ 0.51
TDP1-205ENST00000553527 OVOL1O14753 267 aa18.21■□□□□ 0.51
TDP1-205ENST00000553527 PRH1P02810 166 aa18.21■□□□□ 0.51
TDP1-205ENST00000553527 ANXA7P20073 488 aaKnown RBP18.21■□□□□ 0.51
TDP1-205ENST00000553527 AKR1C2P52895 323 aa18.21■□□□□ 0.51
TDP1-205ENST00000553527 RNASE11Q8TAA1 199 aaKnown RBP18.21■□□□□ 0.51
TDP1-205ENST00000553527 SEC22AQ96IW7 307 aa18.21■□□□□ 0.51
TDP1-205ENST00000553527 SPIN2AQ99865 258 aa18.21■□□□□ 0.51
TDP1-205ENST00000553527 SPIN2BQ9BPZ2 258 aa18.21■□□□□ 0.51
TDP1-205ENST00000553527 PALMDQ9NP74 551 aa18.21■□□□□ 0.51
TDP1-205ENST00000553527 DNAH3Q8TD57 4116 aa18.21■□□□□ 0.51
TDP1-205ENST00000553527 A0A0G2JLM5 398 aa18.2■□□□□ 0.5
TDP1-205ENST00000553527 HMX3A6NHT5 357 aa18.2■□□□□ 0.5
TDP1-205ENST00000553527 CDS2O95674 445 aa18.2■□□□□ 0.5
TDP1-205ENST00000553527 OR9G9P0C7N8 305 aa18.2■□□□□ 0.5
TDP1-205ENST00000553527 SRPXP78539 464 aa18.2■□□□□ 0.5
TDP1-205ENST00000553527 TMEM187Q14656 261 aa18.2■□□□□ 0.5
TDP1-205ENST00000553527 RBPMSQ93062 196 aaKnown RBP18.2■□□□□ 0.5
TDP1-205ENST00000553527 PRR13Q9NZ81 148 aa18.2■□□□□ 0.5
TDP1-205ENST00000553527 UPK2O00526 184 aa18.19■□□□□ 0.5
TDP1-205ENST00000553527 SFT2D2O95562 160 aa18.19■□□□□ 0.5
TDP1-205ENST00000553527 HLA-AP01891 365 aaKnown RBP18.19■□□□□ 0.5
TDP1-205ENST00000553527 H2AFB2P0C5Z0 115 aa18.19■□□□□ 0.5
TDP1-205ENST00000553527 MYOD1P15172 320 aa18.19■□□□□ 0.5
TDP1-205ENST00000553527 RPL8P62917 257 aaKnown RBP18.19■□□□□ 0.5
TDP1-205ENST00000553527 C4orf46Q504U0 113 aa18.19■□□□□ 0.5
TDP1-205ENST00000553527 TMEM268Q5VZI3 342 aa18.19■□□□□ 0.5
TDP1-205ENST00000553527 H2BFWTQ7Z2G1 175 aa18.19■□□□□ 0.5
TDP1-205ENST00000553527 NRARPQ7Z6K4 114 aa18.19■□□□□ 0.5
TDP1-205ENST00000553527 LHFPL5Q8TAF8 219 aa18.19■□□□□ 0.5
TDP1-205ENST00000553527 IGKV1-5P01602 117 aa18.18■□□□□ 0.5
TDP1-205ENST00000553527 OR4E1P0C645 316 aa18.18■□□□□ 0.5
TDP1-205ENST00000553527 HLA-GP17693 338 aa18.18■□□□□ 0.5
TDP1-205ENST00000553527 MAS1LP35410 378 aa18.18■□□□□ 0.5
TDP1-205ENST00000553527 RPL27AP46776 148 aaKnown RBP18.18■□□□□ 0.5
TDP1-205ENST00000553527 SELENOHQ8IZQ5 122 aaKnown RBP18.18■□□□□ 0.5
TDP1-205ENST00000553527 CADM3Q8N126 398 aa18.18■□□□□ 0.5
TDP1-205ENST00000553527 IL22RA2Q969J5 263 aa18.18■□□□□ 0.5
TDP1-205ENST00000553527 RRNAD1Q96FB5 475 aaKnown RBP18.18■□□□□ 0.5
TDP1-205ENST00000553527 TMEM56Q96MV1 263 aa18.18■□□□□ 0.5
TDP1-205ENST00000553527 TMEM56-RWDD3S4R434 201 aa18.18■□□□□ 0.5
TDP1-205ENST00000553527 TRAV3A0A0B4J244 114 aa18.17■□□□□ 0.5
TDP1-205ENST00000553527 E7EUB6 86 aa18.17■□□□□ 0.5
TDP1-205ENST00000553527 RBMXL2O75526 392 aaKnown RBP18.17■□□□□ 0.5
TDP1-205ENST00000553527 SNAPC5O75971 98 aa18.17■□□□□ 0.5
TDP1-205ENST00000553527 IL6RP08887 468 aaPredicted RBP18.17■□□□□ 0.5
TDP1-205ENST00000553527 DCTN2Q13561 401 aaKnown RBP18.17■□□□□ 0.5
TDP1-205ENST00000553527 LGI3Q8N145 548 aa18.17■□□□□ 0.5
TDP1-205ENST00000553527 RANGRFQ9HD47 186 aaPredicted RBP18.17■□□□□ 0.5
TDP1-205ENST00000553527 ZMAT5Q9UDW3 170 aaKnown RBP18.17■□□□□ 0.5
TDP1-205ENST00000553527 PIGBOS1A0A0B4J2F0 54 aa18.16■□□□□ 0.5
TDP1-205ENST00000553527 C9orf170A2RU37 121 aa18.16■□□□□ 0.5
TDP1-205ENST00000553527 SAP30O75446 220 aa18.16■□□□□ 0.5
TDP1-205ENST00000553527 DHRS2Q13268 280 aa18.16■□□□□ 0.5
TDP1-205ENST00000553527 LYG2Q86SG7 212 aa18.16■□□□□ 0.5
TDP1-205ENST00000553527 DUSP18Q8NEJ0 188 aa18.16■□□□□ 0.5
TDP1-205ENST00000553527 PRR25Q96S07 402 aa18.16■□□□□ 0.5
TDP1-205ENST00000553527 FGF2P09038 288 aa18.15■□□□□ 0.5
TDP1-205ENST00000553527 OR2B8PP59922 312 aa18.15■□□□□ 0.5
TDP1-205ENST00000553527 RHOGP84095 191 aa18.15■□□□□ 0.5
TDP1-205ENST00000553527 ANKRD55Q3KP44 614 aa18.15■□□□□ 0.5
TDP1-205ENST00000553527 PLET1Q6UQ28 207 aa18.15■□□□□ 0.5
TDP1-205ENST00000553527 C19orf35Q6ZS72 473 aa18.15■□□□□ 0.5
TDP1-205ENST00000553527 TTC9CQ8N5M4 171 aa18.15■□□□□ 0.5
TDP1-205ENST00000553527 SLC35G3Q8N808 338 aa18.15■□□□□ 0.5
TDP1-205ENST00000553527 OR4A16Q8NH70 328 aa18.15■□□□□ 0.5
TDP1-205ENST00000553527 USMG5Q96IX5 58 aa18.15■□□□□ 0.5
TDP1-205ENST00000553527 COMMD5Q9GZQ3 224 aa18.15■□□□□ 0.5
TDP1-205ENST00000553527 PRNDQ9UKY0 176 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms