RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SSX2Q16385 188 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 NCMAPQ5T1S8 102 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 FAM71F2Q6NXP2 309 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 KCNIP4Q6PIL6 250 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 TCF23Q7RTU1 214 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 C16orf82Q7Z2V1 217 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 VKORC1L1Q8N0U8 176 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 OR5B3Q8NH48 314 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 OSR1Q8TAX0 266 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-205ENST00000553474 PLPPR2Q96GM1 343 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 BET1LQ9NYM9 111 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 JKAMPQ9P055 326 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 PITPNC1Q9UKF7 332 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 PPP5D1E7EU14 171 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 PHOX2AO14813 284 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 YIF1AO95070 293 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 GYPAP02724 150 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 TRGC1P0CF51 173 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 CCKARP32238 428 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 GALR1P47211 349 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 TDGF1P3P51864 188 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 RHOBP62745 196 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 GFRALQ6UXV0 394 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 SPNS3Q6ZMD2 512 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 SLC16A13Q7RTY0 426 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 DOLPP1Q86YN1 238 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 ABHD12Q8N2K0 398 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 C8orf31Q8N9H6 132 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 TMEM170AQ8WVE7 144 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 NEUROG1Q92886 237 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 C19orf24Q9BVV8 132 aa10.59□□□□□ -0.71
SHMT2-205ENST00000553474 TRAV3A0A0B4J244 114 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 A0A0G2JNJ9 132 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 GGCTO75223 188 aaKnown RBP10.58□□□□□ -0.72
SHMT2-205ENST00000553474 TYMSP04818 313 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 FABP1P07148 127 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 SELLP14151 372 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 RPS16P62249 146 aaKnown RBP10.58□□□□□ -0.72
SHMT2-205ENST00000553474 FAM201AQ5SY85 155 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 C1orf229Q6ZS94 237 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-205ENST00000553474 ZNF833PQ6ZTB9 187 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 ABHD5Q8WTS1 349 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 CCL13Q99616 98 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 PLEKHA3Q9HB20 300 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 NGBQ9NPG2 151 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 Q9UFV3 132 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 SH3BGRL2Q9UJC5 107 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 OR51B2Q9Y5P1 312 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 CHD6Q8TD26 2715 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 CFAP46Q8IYW2 2715 aa10.58□□□□□ -0.72
SHMT2-205ENST00000553474 INS-IGF2F8WCM5 200 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 UPK2O00526 184 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 ADIPOQQ15848 244 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 ZNF124Q15973 351 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 FAM216BQ8N7L0 139 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 FRZBQ92765 325 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 SLC35D1Q9NTN3 355 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 J3QR06 171 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 IGHV3-7P01780 117 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 APOA2P02652 100 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 ARL14EPLP0DKL9 152 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 CT45A6P0DMU7 189 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 CT45A5P0DMU8 189 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 CT45A7P0DMV0 189 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 C2orf83Q53S99 150 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 ARSJQ5FYB0 599 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-205ENST00000553474 COA6Q5JTJ3 125 aaKnown RBP10.57□□□□□ -0.72
SHMT2-205ENST00000553474 TMEM144Q7Z5S9 345 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 LINC01551Q86U37 167 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 HIST3H2BBQ8N257 126 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 PNKDQ8N490 385 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 OR1L8Q8NGR8 309 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 OR4A5Q8NH83 315 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 GATAD1Q8WUU5 269 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 ACY3Q96HD9 319 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 SLC35E1Q96K37 410 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 ZNF714Q96N38 554 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 GSN-AS1Q9NRJ2 163 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 SLC25A10Q9UBX3 287 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-205ENST00000553474 ZNF835Q9Y2P0 537 aa10.57□□□□□ -0.72
SHMT2-205ENST00000553474 SMG1Q96Q15 3661 aaKnown RBP10.56□□□□□ -0.72
SHMT2-205ENST00000553474 CA2P00918 260 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 OR4A8P0C604 315 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 RPL31P62899 125 aaKnown RBP10.56□□□□□ -0.72
SHMT2-205ENST00000553474 PRR20EP86478 221 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 PRR20CP86479 221 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 PRR20DP86480 221 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 PRR20BP86481 221 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 PRR20AP86496 221 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 EFNB3Q15768 340 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 CST9LP1Q5W188 147 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 MIC13Q5XKP0 118 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 C22orf34Q6ZV56 151 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 DEFB108BQ8NET1 73 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 OR2T10Q8NGZ9 312 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 VSTM2AQ8TAG5 236 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 ZNF596Q8TC21 504 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 LEAP2Q969E1 77 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 LY96Q9Y6Y9 160 aa10.56□□□□□ -0.72
SHMT2-205ENST00000553474 YLPM1P49750 1951 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms