RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 OR13F1Q8NGS4 319 aa7.43□□□□□ -1.22
ACTN1-208ENST00000553370 LGALS14Q8TCE9 139 aa7.43□□□□□ -1.22
ACTN1-208ENST00000553370 LINC00476Q8WZB0 136 aa7.43□□□□□ -1.22
ACTN1-208ENST00000553370 HINT2Q9BX68 163 aa7.43□□□□□ -1.22
ACTN1-208ENST00000553370 C6orf62Q9GZU0 229 aaPredicted RBP7.43□□□□□ -1.22
ACTN1-208ENST00000553370 SLC5A7Q9GZV3 580 aa7.43□□□□□ -1.22
ACTN1-208ENST00000553370 UBQLN2Q9UHD9 624 aa7.43□□□□□ -1.22
ACTN1-208ENST00000553370 KLK5Q9Y337 293 aaPredicted RBP7.43□□□□□ -1.22
ACTN1-208ENST00000553370 TRAV25A0A0B4J276 109 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 SULT1C2O00338 296 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 NQO2P16083 231 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 CTRB1P17538 263 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 CTRB2Q6GPI1 263 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 TMEM17Q86X19 198 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 STPG3Q8N7X2 389 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 UBAC2Q8NBM4 344 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 BEST4Q8NFU0 473 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 OR51H1Q8NH63 302 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 GPHA2Q96T91 129 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 OVOL2Q9BRP0 275 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 C20orf24Q9BUV8 137 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 QTRT1Q9BXR0 403 aaKnown RBP7.42□□□□□ -1.22
ACTN1-208ENST00000553370 IFT46Q9NQC8 304 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 CCL28Q9NRJ3 127 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 RHBDL2Q9NX52 303 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 BET1LQ9NYM9 111 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 MRPL27Q9P0M9 148 aaKnown RBP7.42□□□□□ -1.22
ACTN1-208ENST00000553370 SSR3Q9UNL2 185 aa7.42□□□□□ -1.22
ACTN1-208ENST00000553370 IGLV11-55A0A075B6I3 123 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 TRAV18A0A075B6X5 111 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 OR2T8A6NH00 312 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 SPRY2O43597 315 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 PPYP01298 95 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 FCER2P06734 321 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 CRYGCP07315 174 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 RPA2P15927 270 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 RPL35AP18077 110 aaKnown RBP7.41□□□□□ -1.22
ACTN1-208ENST00000553370 GALP22466 123 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 BMI1P35226 326 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 TAS2R31P59538 309 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 MXD1Q05195 221 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 Q56UQ5 140 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 SLC25A24Q6NUK1 477 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 SFXN4Q6P4A7 337 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 LYG2Q86SG7 212 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 TPRA1Q86W33 373 aa7.41□□□□□ -1.22
ACTN1-208ENST00000553370 SPAG8Q99932 426 aaPredicted RBP7.41□□□□□ -1.22
ACTN1-208ENST00000553370 PLECQ15149 4684 aaKnown RBP7.4□□□□□ -1.22
ACTN1-208ENST00000553370 LOC100506127A0A0U1RQW1 187 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 OR4C46A6NHA9 309 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 E7EUB6 86 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 UBE2CO00762 179 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 TGOLN2O43493 480 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 HPRT1P00492 218 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 OR13C7P0DN81 318 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 ELLP55199 621 aaPredicted RBP7.4□□□□□ -1.22
ACTN1-208ENST00000553370 OR2B8PP59922 312 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 GABARAPL2P60520 117 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 THOC7Q6I9Y2 204 aaKnown RBP7.4□□□□□ -1.22
ACTN1-208ENST00000553370 UNQ9165/PRO28630Q6UXU0 137 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 ZNF502Q8TBZ5 544 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 CD300LFQ8TDQ1 290 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 FCGR1BQ92637 280 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 BORCS5Q969J3 196 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 WDR12Q9GZL7 423 aaKnown RBP7.4□□□□□ -1.22
ACTN1-208ENST00000553370 DAZ1Q9NQZ3 744 aaKnown RBP7.4□□□□□ -1.22
ACTN1-208ENST00000553370 DIABLOQ9NR28 239 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 TMEM140Q9NV12 185 aa7.4□□□□□ -1.22
ACTN1-208ENST00000553370 TXNL4BQ9NX01 149 aaKnown RBP7.4□□□□□ -1.22
ACTN1-208ENST00000553370 IGHV3-21A0A0B4J1V1 117 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 A0A1B0GW64 132 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 IGLC7A0M8Q6 106 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 RBFOX2O43251 390 aaKnown RBP eCLIP7.39□□□□□ -1.23
ACTN1-208ENST00000553370 ZNF207O43670 478 aaKnown RBP7.39□□□□□ -1.23
ACTN1-208ENST00000553370 SSX5O60225 188 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 TMEM127O75204 238 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 SNAPC5O75971 98 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 S1PR2O95136 353 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 IGLV2-14P01704 120 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 RLN1P04808 185 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 EIF4EP06730 217 aaKnown RBP7.39□□□□□ -1.23
ACTN1-208ENST00000553370 TRAPPC2P0DI81 140 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 TRAPPC2BP0DI82 140 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 PTHLHP12272 177 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 MSMO1Q15800 293 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 IDNKQ5T6J7 187 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 SPSB3Q6PJ21 355 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 Q6ZWC4 215 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 HSD17B13Q7Z5P4 300 aaPredicted RBP7.39□□□□□ -1.23
ACTN1-208ENST00000553370 NR2C2APQ86WQ0 139 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 GVQW1Q8N7I0 195 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 GDPD1Q8N9F7 314 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 OR1L8Q8NGR8 309 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 OR5B3Q8NH48 314 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 VN1R17PQ8TDU5 208 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 TMEM190Q8WZ59 177 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 BSCL2Q96G97 398 aaPredicted RBP7.39□□□□□ -1.23
ACTN1-208ENST00000553370 CMTM3Q96MX0 182 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 SRSF8Q9BRL6 282 aaKnown RBP7.39□□□□□ -1.23
ACTN1-208ENST00000553370 Q9H521 79 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms