RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 ST8SIA2Q92186 375 aa6.72□□□□□ -1.33
TMEM116-217ENST00000552801 RBMXL1Q96E39 390 aaKnown RBP6.72□□□□□ -1.33
TMEM116-217ENST00000552801 FAAP24Q9BTP7 215 aa6.72□□□□□ -1.33
TMEM116-217ENST00000552801 RIMS4Q9H426 269 aaPredicted RBP6.72□□□□□ -1.33
TMEM116-217ENST00000552801 SHPKQ9UHJ6 478 aa6.72□□□□□ -1.33
TMEM116-217ENST00000552801 MEIS3P1A6NDR6 274 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 TMEM235A6NFC5 223 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 H0Y980 276 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 M0QYG6 137 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 SCO1O75880 301 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 NDUFA3O95167 84 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 SIX6O95475 246 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 HLA-AP01891 365 aaKnown RBP6.71□□□□□ -1.33
TMEM116-217ENST00000552801 RLN2P04090 185 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 AKIRIN2Q53H80 203 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 RPL39P5Q59GN2 51 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 RNASE10Q5GAN6 216 aaKnown RBP6.71□□□□□ -1.33
TMEM116-217ENST00000552801 ASPHD1Q5U4P2 390 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 ALKAL2Q6UX46 152 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 ODF3L1Q8IXM7 274 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 GAPTQ8N292 157 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 ARRDC1Q8N5I2 433 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 LFNGQ8NES3 379 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 PCNPQ8WW12 178 aaKnown RBP6.71□□□□□ -1.33
TMEM116-217ENST00000552801 RITA1Q96K30 269 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 PHB2Q99623 299 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 RNF5Q99942 180 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 SPATA25Q9BR10 227 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 FAM103A1Q9BTL3 118 aaKnown RBP6.71□□□□□ -1.33
TMEM116-217ENST00000552801 URM1Q9BTM9 101 aaKnown RBP6.71□□□□□ -1.33
TMEM116-217ENST00000552801 U3KQE9 123 aa6.71□□□□□ -1.33
TMEM116-217ENST00000552801 C9orf170A2RU37 121 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 FOXI3A8MTJ6 420 aaPredicted RBP6.7□□□□□ -1.34
TMEM116-217ENST00000552801 MFNGO00587 321 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 SSX5O60225 188 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 CA2P00918 260 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 IGHV4-30-4P0DP06 118 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 CEACAM6P40199 344 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 LGALS7P47929 136 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 PPP1R1AQ13522 171 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 KIAA0141Q14154 515 aaPredicted RBP6.7□□□□□ -1.34
TMEM116-217ENST00000552801 FXYD3Q14802 87 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 HMGN3Q15651 99 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 SMUG1Q53HV7 270 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 UQCC3Q6UW78 93 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 ZNF562Q6V9R5 426 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 ACOT7LQ6ZUV0 252 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 C6orf201Q7Z4U5 140 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 HOGA1Q86XE5 327 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 OR10R2Q8NGX6 335 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 ABHD14BQ96IU4 210 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 SULT4A1Q9BR01 284 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 LPAR5Q9H1C0 372 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 IFI27L2Q9H2X8 130 aa6.7□□□□□ -1.34
TMEM116-217ENST00000552801 RBM7Q9Y580 266 aaKnown RBP6.7□□□□□ -1.34
TMEM116-217ENST00000552801 KMT2CQ8NEZ4 4911 aaKnown RBP6.7□□□□□ -1.34
TMEM116-217ENST00000552801 A0A0A6YYD4 124 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 H0YJW9 148 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 MPPED1O15442 326 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 JTBO76095 146 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 SPDEFO95238 335 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 CT45A6P0DMU7 189 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 CT45A5P0DMU8 189 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 CT45A7P0DMV0 189 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 HIST1H1DP16402 221 aaKnown RBP6.69□□□□□ -1.34
TMEM116-217ENST00000552801 AADACP22760 399 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 CBX5P45973 191 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 NDPQ00604 133 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 LCN12Q6JVE5 192 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 TMED4Q7Z7H5 227 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 HAPLN4Q86UW8 402 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 LHFPL1Q86WI0 220 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 PDPNQ86YL7 162 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 OR5T1Q8NG75 326 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 COQ8AQ8NI60 647 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 IL17DQ8TAD2 202 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 NMES1Q9C002 83 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 DNAH9Q9NYC9 4486 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 TEX13DA0A0J9YY54 714 aaPredicted RBP6.69□□□□□ -1.34
TMEM116-217ENST00000552801 LCE6AA0A183 80 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 KANTRA0A1W2PQU2 76 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 MPTX1A8MV57 137 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 H3BUA1 57 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 M0R1X1 148 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 FCN1O00602 326 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 SLC25A17O43808 307 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 SOX15O60248 233 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 CTRB1P17538 263 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 HRH1P35367 487 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 CRIP2P52943 208 aaPredicted RBP6.69□□□□□ -1.34
TMEM116-217ENST00000552801 HLA-DRB3P79483 266 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 PSG5Q15238 335 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 SURF2Q15527 256 aaPredicted RBP6.69□□□□□ -1.34
TMEM116-217ENST00000552801 RTL8BQ17RB0 113 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 RPEL1Q2QD12 228 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 CDNFQ49AH0 187 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 CTRB2Q6GPI1 263 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 OR10K2Q6IF99 312 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 C5orf24Q7Z6I8 188 aa6.69□□□□□ -1.34
TMEM116-217ENST00000552801 ZNF546Q86UE3 836 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms